RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 MGAT5Q09328 741 aa13.66□□□□□ -0.22
PKNOX1-209ENST00000560448 SLC29A2Q14542 456 aa13.66□□□□□ -0.22
PKNOX1-209ENST00000560448 TTLL9Q3SXZ7 439 aa13.66□□□□□ -0.22
PKNOX1-209ENST00000560448 LRRC8EQ6NSJ5 796 aa13.66□□□□□ -0.22
PKNOX1-209ENST00000560448 UGT3A1Q6NUS8 523 aa13.66□□□□□ -0.22
PKNOX1-209ENST00000560448 LDB1Q86U70 411 aaPredicted RBP13.66□□□□□ -0.22
PKNOX1-209ENST00000560448 SLC22A15Q8IZD6 547 aa13.66□□□□□ -0.22
PKNOX1-209ENST00000560448 GOLGA6L1Q8N7Z2 621 aa13.66□□□□□ -0.22
PKNOX1-209ENST00000560448 CCDC97Q96F63 343 aaPredicted RBP13.66□□□□□ -0.22
PKNOX1-209ENST00000560448 ATP6V1G3Q96LB4 118 aa13.66□□□□□ -0.22
PKNOX1-209ENST00000560448 TRIM56Q9BRZ2 755 aaKnown RBP13.66□□□□□ -0.22
PKNOX1-209ENST00000560448 SCNM1Q9BWG6 230 aa13.66□□□□□ -0.22
PKNOX1-209ENST00000560448 STRADBQ9C0K7 418 aa13.66□□□□□ -0.22
PKNOX1-209ENST00000560448 NRSN2Q9GZP1 204 aa13.66□□□□□ -0.22
PKNOX1-209ENST00000560448 RAB33BQ9H082 229 aa13.66□□□□□ -0.22
PKNOX1-209ENST00000560448 WWP1Q9H0M0 922 aa13.66□□□□□ -0.22
PKNOX1-209ENST00000560448 KIR3DX1Q9H7L2 352 aa13.66□□□□□ -0.22
PKNOX1-209ENST00000560448 SAYSD1Q9NPB0 183 aa13.66□□□□□ -0.22
PKNOX1-209ENST00000560448 IMP3Q9NV31 184 aaKnown RBP13.66□□□□□ -0.22
PKNOX1-209ENST00000560448 MOCS1Q9NZB8 636 aa13.66□□□□□ -0.22
PKNOX1-209ENST00000560448 SCHIP1Q9P0W5 487 aaPredicted RBP13.66□□□□□ -0.22
PKNOX1-209ENST00000560448 ZFATQ9P243 1243 aa13.66□□□□□ -0.22
PKNOX1-209ENST00000560448 POLG2Q9UHN1 485 aa13.66□□□□□ -0.22
PKNOX1-209ENST00000560448 RABGEF1Q9UJ41 708 aa13.66□□□□□ -0.22
PKNOX1-209ENST00000560448 ASXL3Q9C0F0 2248 aa13.66□□□□□ -0.22
PKNOX1-209ENST00000560448 RP1P56715 2156 aa13.66□□□□□ -0.22
PKNOX1-209ENST00000560448 PTPRBP23467 1997 aa13.65□□□□□ -0.22
PKNOX1-209ENST00000560448 MED19A0JLT2 244 aaPredicted RBP13.65□□□□□ -0.22
PKNOX1-209ENST00000560448 OR52A4PA6NMU1 304 aa13.65□□□□□ -0.22
PKNOX1-209ENST00000560448 E5RI56 91 aa13.65□□□□□ -0.22
PKNOX1-209ENST00000560448 TOX3O15405 576 aaPredicted RBP13.65□□□□□ -0.22
PKNOX1-209ENST00000560448 CCR7P32248 378 aa13.65□□□□□ -0.22
PKNOX1-209ENST00000560448 SKIV2L2P42285 1042 aaKnown RBP13.65□□□□□ -0.22
PKNOX1-209ENST00000560448 MLLT3P42568 568 aaPredicted RBP13.65□□□□□ -0.22
PKNOX1-209ENST00000560448 CCL7P80098 99 aa13.65□□□□□ -0.22
PKNOX1-209ENST00000560448 BOP1Q14137 746 aaKnown RBP13.65□□□□□ -0.22
PKNOX1-209ENST00000560448 ISXQ2M1V0 245 aa13.65□□□□□ -0.22
PKNOX1-209ENST00000560448 AGBL2Q5U5Z8 902 aa13.65□□□□□ -0.22
PKNOX1-209ENST00000560448 XKR5Q6UX68 686 aa13.65□□□□□ -0.22
PKNOX1-209ENST00000560448 UNC5DQ6UXZ4 953 aa13.65□□□□□ -0.22
PKNOX1-209ENST00000560448 CCDC25Q86WR0 208 aa13.65□□□□□ -0.22
PKNOX1-209ENST00000560448 PLXDC1Q8IUK5 500 aa13.65□□□□□ -0.22
PKNOX1-209ENST00000560448 IGDCC3Q8IVU1 814 aa13.65□□□□□ -0.22
PKNOX1-209ENST00000560448 SFTPA2Q8IWL1 248 aa13.65□□□□□ -0.22
PKNOX1-209ENST00000560448 TBC1D21Q8IYX1 336 aa13.65□□□□□ -0.22
PKNOX1-209ENST00000560448 CNPY4Q8N129 248 aa13.65□□□□□ -0.22
PKNOX1-209ENST00000560448 ACVR1CQ8NER5 493 aa13.65□□□□□ -0.22
PKNOX1-209ENST00000560448 OR4D9Q8NGE8 314 aa13.65□□□□□ -0.22
PKNOX1-209ENST00000560448 CFAP36Q96G28 342 aa13.65□□□□□ -0.22
PKNOX1-209ENST00000560448 LIN37Q96GY3 246 aaPredicted RBP13.65□□□□□ -0.22
PKNOX1-209ENST00000560448 RMDN2Q96LZ7 410 aa13.65□□□□□ -0.22
PKNOX1-209ENST00000560448 WDR83Q9BRX9 315 aaKnown RBP13.65□□□□□ -0.22
PKNOX1-209ENST00000560448 PPANQ9NQ55 473 aaKnown RBP13.65□□□□□ -0.22
PKNOX1-209ENST00000560448 IARS2Q9NSE4 1012 aaKnown RBP13.65□□□□□ -0.22
PKNOX1-209ENST00000560448 PSD3Q9NYI0 1048 aa13.65□□□□□ -0.22
PKNOX1-209ENST00000560448 NINJ2Q9NZG7 142 aa13.65□□□□□ -0.22
PKNOX1-209ENST00000560448 CRYL1Q9Y2S2 319 aa13.65□□□□□ -0.22
PKNOX1-209ENST00000560448 HMGB1P1B2RPK0 211 aaPredicted RBP13.64□□□□□ -0.23
PKNOX1-209ENST00000560448 MATN2O00339 956 aa13.64□□□□□ -0.23
PKNOX1-209ENST00000560448 HGSO14964 777 aaPredicted RBP13.64□□□□□ -0.23
PKNOX1-209ENST00000560448 B4GAT1O43505 415 aa13.64□□□□□ -0.23
PKNOX1-209ENST00000560448 BANF1O75531 89 aa13.64□□□□□ -0.23
PKNOX1-209ENST00000560448 MYZAPP0CAP1 466 aa13.64□□□□□ -0.23
PKNOX1-209ENST00000560448 CBSLP0DN79 551 aa13.64□□□□□ -0.23
PKNOX1-209ENST00000560448 ERVK-10P10266 1014 aa13.64□□□□□ -0.23
PKNOX1-209ENST00000560448 ENO3P13929 434 aaPredicted RBP13.64□□□□□ -0.23
PKNOX1-209ENST00000560448 CHRM3P20309 590 aa13.64□□□□□ -0.23
PKNOX1-209ENST00000560448 CD1CP29017 333 aa13.64□□□□□ -0.23
PKNOX1-209ENST00000560448 FMO4P31512 558 aa13.64□□□□□ -0.23
PKNOX1-209ENST00000560448 STX2P32856 288 aa13.64□□□□□ -0.23
PKNOX1-209ENST00000560448 CBSP35520 551 aa13.64□□□□□ -0.23
PKNOX1-209ENST00000560448 HSPA14Q0VDF9 509 aa13.64□□□□□ -0.23
PKNOX1-209ENST00000560448 CTBP1Q13363 440 aa13.64□□□□□ -0.23
PKNOX1-209ENST00000560448 KRT33BQ14525 404 aa13.64□□□□□ -0.23
PKNOX1-209ENST00000560448 CTSL3PQ5NE16 218 aa13.64□□□□□ -0.23
PKNOX1-209ENST00000560448 TEDDM1Q5T9Z0 273 aa13.64□□□□□ -0.23
PKNOX1-209ENST00000560448 TMEM71Q6P5X7 295 aa13.64□□□□□ -0.23
PKNOX1-209ENST00000560448 NEK10Q6ZWH5 1172 aa13.64□□□□□ -0.23
PKNOX1-209ENST00000560448 DENND6AQ8IWF6 608 aa13.64□□□□□ -0.23
PKNOX1-209ENST00000560448 CARFQ8N187 725 aa13.64□□□□□ -0.23
PKNOX1-209ENST00000560448 PHC3Q8NDX5 983 aa13.64□□□□□ -0.23
PKNOX1-209ENST00000560448 MAGEC3Q8TD91 643 aa13.64□□□□□ -0.23
PKNOX1-209ENST00000560448 TFGQ92734 400 aaPredicted RBP13.64□□□□□ -0.23
PKNOX1-209ENST00000560448 FOPNLQ96NB1 174 aa13.64□□□□□ -0.23
PKNOX1-209ENST00000560448 INSM2Q96T92 566 aaPredicted RBP13.64□□□□□ -0.23
PKNOX1-209ENST00000560448 AKAP7Q9P0M2 348 aaPredicted RBP13.64□□□□□ -0.23
PKNOX1-209ENST00000560448 PDP2Q9P2J9 529 aa13.64□□□□□ -0.23
PKNOX1-209ENST00000560448 EPHA6Q9UF33 1036 aa13.64□□□□□ -0.23
PKNOX1-209ENST00000560448 PSMD13Q9UNM6 376 aa13.64□□□□□ -0.23
PKNOX1-209ENST00000560448 TRBV23OR9-2A0A075B6M9 112 aa13.64□□□□□ -0.23
PKNOX1-209ENST00000560448 VPS26AO75436 327 aa13.64□□□□□ -0.23
PKNOX1-209ENST00000560448 UBXN7O94888 489 aa13.64□□□□□ -0.23
PKNOX1-209ENST00000560448 AMD1P17707 334 aa13.64□□□□□ -0.23
PKNOX1-209ENST00000560448 ACADLP28330 430 aa13.64□□□□□ -0.23
PKNOX1-209ENST00000560448 MAGEA4P43358 317 aa13.64□□□□□ -0.23
PKNOX1-209ENST00000560448 INHBCP55103 352 aa13.64□□□□□ -0.23
PKNOX1-209ENST00000560448 OR1D5P58170 312 aa13.64□□□□□ -0.23
PKNOX1-209ENST00000560448 ZFP36L1Q07352 338 aaKnown RBP13.64□□□□□ -0.23
PKNOX1-209ENST00000560448 NAB1Q13506 487 aa13.64□□□□□ -0.23
PKNOX1-209ENST00000560448 GPR18Q14330 331 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms