RNA–Protein interactions for RNA: ENST00000559686.3

SNRPA1-208, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-208ENST00000559686 SPSB2Q99619 263 aa8.66□□□□□ -1.02
SNRPA1-208ENST00000559686 DPH2Q9BQC3 489 aaPredicted RBP8.66□□□□□ -1.02
SNRPA1-208ENST00000559686 GPR63Q9BZJ6 419 aa8.66□□□□□ -1.02
SNRPA1-208ENST00000559686 GANQ9H2C0 597 aa8.66□□□□□ -1.02
SNRPA1-208ENST00000559686 ZFYVE1Q9HBF4 777 aa8.66□□□□□ -1.02
SNRPA1-208ENST00000559686 C1GALT1Q9NS00 363 aa8.66□□□□□ -1.02
SNRPA1-208ENST00000559686 RBM22Q9NW64 420 aaKnown RBP eCLIP8.66□□□□□ -1.02
SNRPA1-208ENST00000559686 SLC24A2Q9UI40 661 aa8.66□□□□□ -1.02
SNRPA1-208ENST00000559686 POMT2Q9UKY4 750 aa8.66□□□□□ -1.02
SNRPA1-208ENST00000559686 TMPRSS11EQ9UL52 423 aa8.66□□□□□ -1.02
SNRPA1-208ENST00000559686 RGSL1A5PLK6 1076 aa8.65□□□□□ -1.02
SNRPA1-208ENST00000559686 TMEM200CA6NKL6 621 aa8.65□□□□□ -1.02
SNRPA1-208ENST00000559686 EIF3CLB5ME19 914 aaKnown RBP8.65□□□□□ -1.02
SNRPA1-208ENST00000559686 EPHB6O15197 1021 aa8.65□□□□□ -1.02
SNRPA1-208ENST00000559686 GPR39O43194 453 aa8.65□□□□□ -1.02
SNRPA1-208ENST00000559686 OR2B3O76000 313 aa8.65□□□□□ -1.02
SNRPA1-208ENST00000559686 WISP2O76076 250 aa8.65□□□□□ -1.02
SNRPA1-208ENST00000559686 CLDN14O95500 239 aa8.65□□□□□ -1.02
SNRPA1-208ENST00000559686 MT-CYBP00156 380 aaPredicted RBP8.65□□□□□ -1.02
SNRPA1-208ENST00000559686 HLA-DQB2P05538 268 aa8.65□□□□□ -1.02
SNRPA1-208ENST00000559686 CTSBP07858 339 aa8.65□□□□□ -1.02
SNRPA1-208ENST00000559686 UQCRHP07919 91 aa8.65□□□□□ -1.02
SNRPA1-208ENST00000559686 HBQ1P09105 142 aa8.65□□□□□ -1.02
SNRPA1-208ENST00000559686 TCF4P15884 667 aa8.65□□□□□ -1.02
SNRPA1-208ENST00000559686 KLK2P20151 261 aa8.65□□□□□ -1.02
SNRPA1-208ENST00000559686 CD86P42081 329 aa8.65□□□□□ -1.02
SNRPA1-208ENST00000559686 ZNF165P49910 485 aa8.65□□□□□ -1.02
SNRPA1-208ENST00000559686 CTSCP53634 463 aa8.65□□□□□ -1.02
SNRPA1-208ENST00000559686 CASP6P55212 293 aa8.65□□□□□ -1.02
SNRPA1-208ENST00000559686 PPP2R2AP63151 447 aa8.65□□□□□ -1.02
SNRPA1-208ENST00000559686 DCDP81605 110 aaKnown RBP8.65□□□□□ -1.02
SNRPA1-208ENST00000559686 PMP22Q01453 160 aa8.65□□□□□ -1.02
SNRPA1-208ENST00000559686 ATP13A5Q4VNC0 1218 aa8.65□□□□□ -1.02
SNRPA1-208ENST00000559686 TMEM220Q6QAJ8 160 aa8.65□□□□□ -1.02
SNRPA1-208ENST00000559686 ISLR2Q6UXK2 745 aa8.65□□□□□ -1.02
SNRPA1-208ENST00000559686 TRIM73Q86UV7 250 aa8.65□□□□□ -1.02
SNRPA1-208ENST00000559686 TMEM200AQ86VY9 491 aa8.65□□□□□ -1.02
SNRPA1-208ENST00000559686 MCOLN2Q8IZK6 566 aa8.65□□□□□ -1.02
SNRPA1-208ENST00000559686 TEX26Q8N6G2 289 aa8.65□□□□□ -1.02
SNRPA1-208ENST00000559686 ZNF655Q8N720 491 aaPredicted RBP8.65□□□□□ -1.02
SNRPA1-208ENST00000559686 BEND7Q8N7W2 519 aaPredicted RBP8.65□□□□□ -1.02
SNRPA1-208ENST00000559686 RASGEF1AQ8N9B8 481 aa8.65□□□□□ -1.02
SNRPA1-208ENST00000559686 ARRDC2Q8TBH0 407 aa8.65□□□□□ -1.02
SNRPA1-208ENST00000559686 CSPG4P5Q96PW8 444 aa8.65□□□□□ -1.02
SNRPA1-208ENST00000559686 LYSMD1Q96S90 227 aa8.65□□□□□ -1.02
SNRPA1-208ENST00000559686 EIF3CQ99613 913 aaKnown RBP8.65□□□□□ -1.02
SNRPA1-208ENST00000559686 C17orf62Q9BQA9 187 aa8.65□□□□□ -1.02
SNRPA1-208ENST00000559686 LHPPQ9H008 270 aa8.65□□□□□ -1.02
SNRPA1-208ENST00000559686 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.65□□□□□ -1.02
SNRPA1-208ENST00000559686 TXLNGQ9NUQ3 528 aa8.65□□□□□ -1.02
SNRPA1-208ENST00000559686 TAB2Q9NYJ8 693 aa8.65□□□□□ -1.02
SNRPA1-208ENST00000559686 TAS2R14Q9NYV8 317 aa8.65□□□□□ -1.02
SNRPA1-208ENST00000559686 ZNF711Q9Y462 761 aa8.65□□□□□ -1.02
SNRPA1-208ENST00000559686 ABCA2Q9BZC7 2435 aa8.64□□□□□ -1.03
SNRPA1-208ENST00000559686 FAM187AA6NFU0 413 aa8.64□□□□□ -1.03
SNRPA1-208ENST00000559686 AURKAO14965 403 aa8.64□□□□□ -1.03
SNRPA1-208ENST00000559686 FANCGO15287 622 aa8.64□□□□□ -1.03
SNRPA1-208ENST00000559686 ZNHIT1O43257 154 aa8.64□□□□□ -1.03
SNRPA1-208ENST00000559686 HCRTR1O43613 425 aa8.64□□□□□ -1.03
SNRPA1-208ENST00000559686 MFSD11O43934 449 aa8.64□□□□□ -1.03
SNRPA1-208ENST00000559686 SLC19A2O60779 497 aa8.64□□□□□ -1.03
SNRPA1-208ENST00000559686 FAM155BO75949 473 aa8.64□□□□□ -1.03
SNRPA1-208ENST00000559686 POLBP06746 335 aa8.64□□□□□ -1.03
SNRPA1-208ENST00000559686 ALAS2P22557 587 aa8.64□□□□□ -1.03
SNRPA1-208ENST00000559686 PRDX3P30048 256 aaKnown RBP8.64□□□□□ -1.03
SNRPA1-208ENST00000559686 SERPINB6P35237 376 aa8.64□□□□□ -1.03
SNRPA1-208ENST00000559686 HCAR3P49019 387 aa8.64□□□□□ -1.03
SNRPA1-208ENST00000559686 IST1P53990 364 aa8.64□□□□□ -1.03
SNRPA1-208ENST00000559686 JAM2P57087 298 aa8.64□□□□□ -1.03
SNRPA1-208ENST00000559686 RPL26P61254 145 aaKnown RBP8.64□□□□□ -1.03
SNRPA1-208ENST00000559686 RBPJQ06330 500 aa8.64□□□□□ -1.03
SNRPA1-208ENST00000559686 MFAP5Q13361 173 aa8.64□□□□□ -1.03
SNRPA1-208ENST00000559686 PCSK7Q16549 785 aa8.64□□□□□ -1.03
SNRPA1-208ENST00000559686 NKAIN1Q4KMZ8 207 aa8.64□□□□□ -1.03
SNRPA1-208ENST00000559686 FNBP1LQ5T0N5 605 aa8.64□□□□□ -1.03
SNRPA1-208ENST00000559686 RPUSD3Q6P087 351 aaKnown RBP8.64□□□□□ -1.03
SNRPA1-208ENST00000559686 POLNQ7Z5Q5 900 aa8.64□□□□□ -1.03
SNRPA1-208ENST00000559686 TGIF2LYQ8IUE0 185 aa8.64□□□□□ -1.03
SNRPA1-208ENST00000559686 FAM20CQ8IXL6 584 aa8.64□□□□□ -1.03
SNRPA1-208ENST00000559686 RAVER1Q8IY67 606 aaKnown RBP8.64□□□□□ -1.03
SNRPA1-208ENST00000559686 MDFIQ99750 246 aa8.64□□□□□ -1.03
SNRPA1-208ENST00000559686 AGPAT1Q99943 283 aa8.64□□□□□ -1.03
SNRPA1-208ENST00000559686 MESP1Q9BRJ9 268 aa8.64□□□□□ -1.03
SNRPA1-208ENST00000559686 TMEM121Q9BTD3 319 aa8.64□□□□□ -1.03
SNRPA1-208ENST00000559686 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.64□□□□□ -1.03
SNRPA1-208ENST00000559686 SRMSQ9H3Y6 488 aa8.64□□□□□ -1.03
SNRPA1-208ENST00000559686 SOX17Q9H6I2 414 aaPredicted RBP8.64□□□□□ -1.03
SNRPA1-208ENST00000559686 KIR3DX1Q9H7L2 352 aa8.64□□□□□ -1.03
SNRPA1-208ENST00000559686 SYTL2Q9HCH5 934 aa8.64□□□□□ -1.03
SNRPA1-208ENST00000559686 FAM60AQ9NP50 221 aa8.64□□□□□ -1.03
SNRPA1-208ENST00000559686 PTGFRNQ9P2B2 879 aa8.64□□□□□ -1.03
SNRPA1-208ENST00000559686 RPL26L1Q9UNX3 145 aaKnown RBP8.64□□□□□ -1.03
SNRPA1-208ENST00000559686 SPG11Q96JI7 2443 aa8.63□□□□□ -1.03
SNRPA1-208ENST00000559686 DYTNA2CJ06 578 aa8.63□□□□□ -1.03
SNRPA1-208ENST00000559686 FAM227AF5H4B4 570 aa8.63□□□□□ -1.03
SNRPA1-208ENST00000559686 BTN3A3O00478 584 aa8.63□□□□□ -1.03
SNRPA1-208ENST00000559686 BTN3A1O00481 513 aa8.63□□□□□ -1.03
SNRPA1-208ENST00000559686 SOCS6O14544 535 aa8.63□□□□□ -1.03
SNRPA1-208ENST00000559686 UGT1A9O60656 530 aa8.63□□□□□ -1.03
SNRPA1-208ENST00000559686 SLC35G4P0C7Q5 338 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms