RNA–Protein interactions for RNA: ENST00000559522.1

PIF1-206, Transcript of PIF1 5'-to-3' DNA helicase, human

TSL 3

Gene PIF1, Length 650 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PIF1-206	ENST00000559522	PRR7	Q8TB68	274 aa		13.76	□□□□□ -0.21
PIF1-206	ENST00000559522	CCDC110	Q8TBZ0	833 aa		13.76	□□□□□ -0.21
PIF1-206	ENST00000559522	ACTL9	Q8TC94	416 aa		13.76	□□□□□ -0.21
PIF1-206	ENST00000559522	HM13	Q8TCT9	377 aa		13.76	□□□□□ -0.21
PIF1-206	ENST00000559522	LRRC45	Q96CN5	670 aa		13.76	□□□□□ -0.21
PIF1-206	ENST00000559522	TBL1Y	Q9BQ87	522 aa		13.76	□□□□□ -0.21
PIF1-206	ENST00000559522	HGH1	Q9BTY7	390 aa		13.76	□□□□□ -0.21
PIF1-206	ENST00000559522	NLN	Q9BYT8	704 aa		13.76	□□□□□ -0.21
PIF1-206	ENST00000559522	IRAK4	Q9NWZ3	460 aa		13.76	□□□□□ -0.21
PIF1-206	ENST00000559522	POMT2	Q9UKY4	750 aa		13.76	□□□□□ -0.21
PIF1-206	ENST00000559522	PCDHGA9	Q9Y5G4	932 aa	Known RBP	13.76	□□□□□ -0.21
PIF1-206	ENST00000559522	TLN1	Q9Y490	2541 aa	Known RBP	13.76	□□□□□ -0.21
PIF1-206	ENST00000559522	CCDC78	A2IDD5	438 aa		13.75	□□□□□ -0.21
PIF1-206	ENST00000559522		E7EQ34	232 aa		13.75	□□□□□ -0.21
PIF1-206	ENST00000559522	BTN3A1	O00481	513 aa		13.75	□□□□□ -0.21
PIF1-206	ENST00000559522	ZNF749	O43361	778 aa		13.75	□□□□□ -0.21
PIF1-206	ENST00000559522	LDB2	O43679	373 aa		13.75	□□□□□ -0.21
PIF1-206	ENST00000559522	SGTA	O43765	313 aa		13.75	□□□□□ -0.21
PIF1-206	ENST00000559522	DPM1	O60762	260 aa		13.75	□□□□□ -0.21
PIF1-206	ENST00000559522	RAB40AL	P0C0E4	278 aa		13.75	□□□□□ -0.21
PIF1-206	ENST00000559522	RBP3	P10745	1247 aa		13.75	□□□□□ -0.21
PIF1-206	ENST00000559522	PDHA2	P29803	388 aa		13.75	□□□□□ -0.21
PIF1-206	ENST00000559522	MC4R	P32245	332 aa		13.75	□□□□□ -0.21
PIF1-206	ENST00000559522	ADRA1A	P35348	466 aa		13.75	□□□□□ -0.21
PIF1-206	ENST00000559522	HADHA	P40939	763 aa		13.75	□□□□□ -0.21
PIF1-206	ENST00000559522	CETN2	P41208	172 aa		13.75	□□□□□ -0.21
PIF1-206	ENST00000559522	ITGA1	P56199	1179 aa		13.75	□□□□□ -0.21
PIF1-206	ENST00000559522	INPP5J	Q15735	1006 aa	Predicted RBP	13.75	□□□□□ -0.21
PIF1-206	ENST00000559522	EIF2S3L	Q2VIR3	472 aa	Known RBP	13.75	□□□□□ -0.21
PIF1-206	ENST00000559522	C1orf189	Q5VU69	101 aa		13.75	□□□□□ -0.21
PIF1-206	ENST00000559522	SARM1	Q6SZW1	724 aa		13.75	□□□□□ -0.21
PIF1-206	ENST00000559522	SNX20	Q7Z614	316 aa		13.75	□□□□□ -0.21
PIF1-206	ENST00000559522	AMIGO1	Q86WK6	493 aa		13.75	□□□□□ -0.21
PIF1-206	ENST00000559522	SYTL1	Q8IYJ3	562 aa		13.75	□□□□□ -0.21
PIF1-206	ENST00000559522	GPR135	Q8IZ08	494 aa		13.75	□□□□□ -0.21
PIF1-206	ENST00000559522	CARF	Q8N187	725 aa		13.75	□□□□□ -0.21
PIF1-206	ENST00000559522	NXPE1	Q8N323	547 aa		13.75	□□□□□ -0.21
PIF1-206	ENST00000559522	TAB3	Q8N5C8	712 aa	Predicted RBP	13.75	□□□□□ -0.21
PIF1-206	ENST00000559522	OR52E1	Q8NGJ3	308 aa		13.75	□□□□□ -0.21
PIF1-206	ENST00000559522	HEXDC	Q8WVB3	486 aa		13.75	□□□□□ -0.21
PIF1-206	ENST00000559522	TFG	Q92734	400 aa	Predicted RBP	13.75	□□□□□ -0.21
PIF1-206	ENST00000559522	SGSM3	Q96HU1	749 aa		13.75	□□□□□ -0.21
PIF1-206	ENST00000559522	LINC00615	Q96LM1	132 aa	Predicted RBP	13.75	□□□□□ -0.21
PIF1-206	ENST00000559522	ALS2CR12	Q96Q35	445 aa		13.75	□□□□□ -0.21
PIF1-206	ENST00000559522	GORASP1	Q9BQQ3	440 aa		13.75	□□□□□ -0.21
PIF1-206	ENST00000559522	LATS2	Q9NRM7	1088 aa		13.75	□□□□□ -0.21
PIF1-206	ENST00000559522	ZDHHC3	Q9NYG2	299 aa		13.75	□□□□□ -0.21
PIF1-206	ENST00000559522	ACTR10	Q9NZ32	417 aa		13.75	□□□□□ -0.21
PIF1-206	ENST00000559522	SMARCAL1	Q9NZC9	954 aa		13.75	□□□□□ -0.21
PIF1-206	ENST00000559522	GPN3	Q9UHW5	284 aa	Predicted RBP	13.75	□□□□□ -0.21
PIF1-206	ENST00000559522	BTRC	Q9Y297	605 aa		13.75	□□□□□ -0.21
PIF1-206	ENST00000559522	TDRKH	Q9Y2W6	561 aa	Known RBP	13.75	□□□□□ -0.21
PIF1-206	ENST00000559522	MAP4K5	Q9Y4K4	846 aa		13.75	□□□□□ -0.21
PIF1-206	ENST00000559522	DOPEY2	Q9Y3R5	2298 aa		13.75	□□□□□ -0.21
PIF1-206	ENST00000559522	BOD1L1	Q8NFC6	3051 aa		13.74	□□□□□ -0.21
PIF1-206	ENST00000559522	C2orf74	A8MZ97	194 aa		13.74	□□□□□ -0.21
PIF1-206	ENST00000559522		C9J4A7	227 aa		13.74	□□□□□ -0.21
PIF1-206	ENST00000559522	MATN2	O00339	956 aa		13.74	□□□□□ -0.21
PIF1-206	ENST00000559522	PRSS56	P0CW18	603 aa		13.74	□□□□□ -0.21
PIF1-206	ENST00000559522	PTMS	P20962	102 aa		13.74	□□□□□ -0.21
PIF1-206	ENST00000559522	PRLHR	P49683	370 aa		13.74	□□□□□ -0.21
PIF1-206	ENST00000559522	VAV2	P52735	878 aa		13.74	□□□□□ -0.21
PIF1-206	ENST00000559522	PRR30	Q53SZ7	412 aa	Predicted RBP	13.74	□□□□□ -0.21
PIF1-206	ENST00000559522	JMJD6	Q6NYC1	403 aa	Predicted RBP	13.74	□□□□□ -0.21
PIF1-206	ENST00000559522	MED25	Q71SY5	747 aa		13.74	□□□□□ -0.21
PIF1-206	ENST00000559522	TRIM73	Q86UV7	250 aa		13.74	□□□□□ -0.21
PIF1-206	ENST00000559522	SERPINA9	Q86WD7	417 aa		13.74	□□□□□ -0.21
PIF1-206	ENST00000559522	CLDN19	Q8N6F1	224 aa		13.74	□□□□□ -0.21
PIF1-206	ENST00000559522	DNAJC1	Q96KC8	554 aa	Known RBP	13.74	□□□□□ -0.21
PIF1-206	ENST00000559522	LRFN5	Q96NI6	719 aa		13.74	□□□□□ -0.21
PIF1-206	ENST00000559522	TRAPPC9	Q96Q05	1148 aa		13.74	□□□□□ -0.21
PIF1-206	ENST00000559522	NUDT9	Q9BW91	350 aa		13.74	□□□□□ -0.21
PIF1-206	ENST00000559522	OSBPL8	Q9BZF1	889 aa		13.74	□□□□□ -0.21
PIF1-206	ENST00000559522	TRIM5	Q9C035	493 aa		13.74	□□□□□ -0.21
PIF1-206	ENST00000559522	COG4	Q9H9E3	785 aa		13.74	□□□□□ -0.21
PIF1-206	ENST00000559522	VPS37B	Q9H9H4	285 aa		13.74	□□□□□ -0.21
PIF1-206	ENST00000559522	SYTL2	Q9HCH5	934 aa		13.74	□□□□□ -0.21
PIF1-206	ENST00000559522	LUC7L	Q9NQ29	371 aa	Known RBP	13.74	□□□□□ -0.21
PIF1-206	ENST00000559522	PCMTD2	Q9NV79	361 aa		13.74	□□□□□ -0.21
PIF1-206	ENST00000559522	GPR83	Q9NYM4	423 aa		13.74	□□□□□ -0.21
PIF1-206	ENST00000559522	PLEKHB1	Q9UF11	243 aa	Predicted RBP	13.74	□□□□□ -0.21
PIF1-206	ENST00000559522	C17orf113	A0A1B0GUU1	675 aa		13.73	□□□□□ -0.21
PIF1-206	ENST00000559522		A1L4Q6	167 aa		13.73	□□□□□ -0.21
PIF1-206	ENST00000559522	SEMA7A	O75326	666 aa		13.73	□□□□□ -0.21
PIF1-206	ENST00000559522	CYLC1	P35663	651 aa	Predicted RBP	13.73	□□□□□ -0.21
PIF1-206	ENST00000559522	RRAD	P55042	308 aa		13.73	□□□□□ -0.21
PIF1-206	ENST00000559522	HADHB	P55084	474 aa	Known RBP	13.73	□□□□□ -0.21
PIF1-206	ENST00000559522	COPS2	P61201	443 aa		13.73	□□□□□ -0.21
PIF1-206	ENST00000559522	MRPL49	Q13405	166 aa	Known RBP	13.73	□□□□□ -0.21
PIF1-206	ENST00000559522	ATP1A4	Q13733	1029 aa		13.73	□□□□□ -0.21
PIF1-206	ENST00000559522	SKOR2	Q2VWA4	1001 aa	Predicted RBP	13.73	□□□□□ -0.21
PIF1-206	ENST00000559522	AADACL2	Q6P093	401 aa		13.73	□□□□□ -0.21
PIF1-206	ENST00000559522	NAPRT	Q6XQN6	538 aa		13.73	□□□□□ -0.21
PIF1-206	ENST00000559522	CDHR3	Q6ZTQ4	885 aa		13.73	□□□□□ -0.21
PIF1-206	ENST00000559522	RAB43	Q86YS6	212 aa		13.73	□□□□□ -0.21
PIF1-206	ENST00000559522	ZBTB2	Q8N680	514 aa		13.73	□□□□□ -0.21
PIF1-206	ENST00000559522	TMEM102	Q8N9M5	508 aa	Predicted RBP	13.73	□□□□□ -0.21
PIF1-206	ENST00000559522	SSC4D	Q8WTU2	575 aa		13.73	□□□□□ -0.21
PIF1-206	ENST00000559522	SPRTN	Q9H040	489 aa	Predicted RBP	13.73	□□□□□ -0.21
PIF1-206	ENST00000559522	TFB2M	Q9H5Q4	396 aa	Known RBP	13.73	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms