RNA–Protein interactions for RNA: ENST00000559460.5

SMAD3-211, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-211ENST00000559460 TDRD1Q9BXT4 1180 aaKnown RBP9.34□□□□□ -0.91
SMAD3-211ENST00000559460 KLHL25Q9H0H3 589 aa9.34□□□□□ -0.91
SMAD3-211ENST00000559460 SRMSQ9H3Y6 488 aa9.34□□□□□ -0.91
SMAD3-211ENST00000559460 GOLPH3LQ9H4A5 285 aa9.34□□□□□ -0.91
SMAD3-211ENST00000559460 CLSTN2Q9H4D0 955 aa9.34□□□□□ -0.91
SMAD3-211ENST00000559460 KIR3DX1Q9H7L2 352 aa9.34□□□□□ -0.91
SMAD3-211ENST00000559460 ZWILCHQ9H900 591 aa9.34□□□□□ -0.91
SMAD3-211ENST00000559460 PCDH9Q9HC56 1237 aa9.34□□□□□ -0.91
SMAD3-211ENST00000559460 ZNF160Q9HCG1 818 aa9.34□□□□□ -0.91
SMAD3-211ENST00000559460 NLRC4Q9NPP4 1024 aa9.34□□□□□ -0.91
SMAD3-211ENST00000559460 SAMSN1Q9NSI8 373 aaKnown RBP9.34□□□□□ -0.91
SMAD3-211ENST00000559460 ADAM22Q9P0K1 906 aa9.34□□□□□ -0.91
SMAD3-211ENST00000559460 SLC24A2Q9UI40 661 aa9.34□□□□□ -0.91
SMAD3-211ENST00000559460 NXT1Q9UKK6 140 aaKnown RBP9.34□□□□□ -0.91
SMAD3-211ENST00000559460 RPL26L1Q9UNX3 145 aaKnown RBP9.34□□□□□ -0.91
SMAD3-211ENST00000559460 HS3ST3B1Q9Y662 390 aa9.34□□□□□ -0.91
SMAD3-211ENST00000559460 PCM1Q15154 2024 aa9.33□□□□□ -0.92
SMAD3-211ENST00000559460 IDSB3KWA1 339 aa9.33□□□□□ -0.92
SMAD3-211ENST00000559460 CNOT3O75175 753 aaKnown RBP9.33□□□□□ -0.92
SMAD3-211ENST00000559460 WFS1O76024 890 aa9.33□□□□□ -0.92
SMAD3-211ENST00000559460 PRAMEF1O95521 474 aa9.33□□□□□ -0.92
SMAD3-211ENST00000559460 HPP00738 406 aa9.33□□□□□ -0.92
SMAD3-211ENST00000559460 ACPPP15309 386 aa9.33□□□□□ -0.92
SMAD3-211ENST00000559460 IGFBP2P18065 325 aa9.33□□□□□ -0.92
SMAD3-211ENST00000559460 CES1P23141 567 aa9.33□□□□□ -0.92
SMAD3-211ENST00000559460 PRDX3P30048 256 aaKnown RBP9.33□□□□□ -0.92
SMAD3-211ENST00000559460 SERPINB6P35237 376 aa9.33□□□□□ -0.92
SMAD3-211ENST00000559460 MTIF2P46199 727 aaKnown RBP9.33□□□□□ -0.92
SMAD3-211ENST00000559460 ZNF135P52742 658 aaPredicted RBP9.33□□□□□ -0.92
SMAD3-211ENST00000559460 DCDC1P59894 354 aa9.33□□□□□ -0.92
SMAD3-211ENST00000559460 YBX1P67809 324 aaKnown RBP9.33□□□□□ -0.92
SMAD3-211ENST00000559460 ALDH6A1Q02252 535 aaKnown RBP9.33□□□□□ -0.92
SMAD3-211ENST00000559460 SYCP1Q15431 976 aa9.33□□□□□ -0.92
SMAD3-211ENST00000559460 ERMARDQ5T6L9 678 aa9.33□□□□□ -0.92
SMAD3-211ENST00000559460 TMCO3Q6UWJ1 677 aa9.33□□□□□ -0.92
SMAD3-211ENST00000559460 KIRREL2Q6UWL6 708 aa9.33□□□□□ -0.92
SMAD3-211ENST00000559460 CDHR3Q6ZTQ4 885 aa9.33□□□□□ -0.92
SMAD3-211ENST00000559460 SIRT6Q8N6T7 355 aa9.33□□□□□ -0.92
SMAD3-211ENST00000559460 ZNF655Q8N720 491 aaPredicted RBP9.33□□□□□ -0.92
SMAD3-211ENST00000559460 C3orf20Q8ND61 904 aa9.33□□□□□ -0.92
SMAD3-211ENST00000559460 BRSK1Q8TDC3 778 aa9.33□□□□□ -0.92
SMAD3-211ENST00000559460 LCN9Q8WX39 176 aa9.33□□□□□ -0.92
SMAD3-211ENST00000559460 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.33□□□□□ -0.923e-6■■■■■ 32.7
SMAD3-211ENST00000559460 GPR137Q96N19 417 aa9.33□□□□□ -0.92
SMAD3-211ENST00000559460 LYSMD1Q96S90 227 aa9.33□□□□□ -0.92
SMAD3-211ENST00000559460 TUBGCP2Q9BSJ2 902 aa9.33□□□□□ -0.92
SMAD3-211ENST00000559460 CNPY3Q9BT09 278 aa9.33□□□□□ -0.92
SMAD3-211ENST00000559460 ADGRE3Q9BY15 652 aa9.33□□□□□ -0.92
SMAD3-211ENST00000559460 VPS16Q9H269 839 aa9.33□□□□□ -0.92
SMAD3-211ENST00000559460 SOX17Q9H6I2 414 aaPredicted RBP9.33□□□□□ -0.92
SMAD3-211ENST00000559460 WDR54Q9H977 334 aa9.33□□□□□ -0.92
SMAD3-211ENST00000559460 ZFYVE1Q9HBF4 777 aa9.33□□□□□ -0.92
SMAD3-211ENST00000559460 KCNJ16Q9NPI9 418 aa9.33□□□□□ -0.92
SMAD3-211ENST00000559460 ZNF835Q9Y2P0 537 aa9.33□□□□□ -0.92
SMAD3-211ENST00000559460 LUC7L2Q9Y383 392 aaKnown RBP9.33□□□□□ -0.92
SMAD3-211ENST00000559460 HEBP2Q9Y5Z4 205 aa9.33□□□□□ -0.92
SMAD3-211ENST00000559460 NCOA6Q14686 2063 aaPredicted RBP9.33□□□□□ -0.92
SMAD3-211ENST00000559460 CACNA1CQ13936 2221 aa9.32□□□□□ -0.92
SMAD3-211ENST00000559460 NSG1A0A0A6YYJ2 146 aa9.32□□□□□ -0.92
SMAD3-211ENST00000559460 FAM237BA0A1B0GVD1 139 aa9.32□□□□□ -0.92
SMAD3-211ENST00000559460 NKX2-6A6NCS4 301 aa9.32□□□□□ -0.92
SMAD3-211ENST00000559460 SIGLEC16A6NMB1 481 aa9.32□□□□□ -0.92
SMAD3-211ENST00000559460 RNF212BA8MTL3 300 aa9.32□□□□□ -0.92
SMAD3-211ENST00000559460 C2orf74A8MZ97 194 aa9.32□□□□□ -0.92
SMAD3-211ENST00000559460 TTI1O43156 1089 aa9.32□□□□□ -0.92
SMAD3-211ENST00000559460 MAFKO60675 156 aa9.32□□□□□ -0.92
SMAD3-211ENST00000559460 POP7O75817 140 aaKnown RBP9.32□□□□□ -0.92
SMAD3-211ENST00000559460 ALBP02768 609 aa9.32□□□□□ -0.92
SMAD3-211ENST00000559460 CD44P16070 742 aaKnown RBP9.32□□□□□ -0.92
SMAD3-211ENST00000559460 ARL4AP40617 200 aa9.32□□□□□ -0.92
SMAD3-211ENST00000559460 NSG1P42857 185 aa9.32□□□□□ -0.92
SMAD3-211ENST00000559460 CARSP49589 748 aaKnown RBP9.32□□□□□ -0.92
SMAD3-211ENST00000559460 RAB28P51157 221 aa9.32□□□□□ -0.92
SMAD3-211ENST00000559460 GSCP56915 257 aaPredicted RBP9.32□□□□□ -0.92
SMAD3-211ENST00000559460 AP2B1P63010 937 aa9.32□□□□□ -0.92
SMAD3-211ENST00000559460 PMP22Q01453 160 aa9.32□□□□□ -0.92
SMAD3-211ENST00000559460 TMEM115Q12893 351 aaPredicted RBP9.32□□□□□ -0.92
SMAD3-211ENST00000559460 NFE2L1Q14494 772 aa9.32□□□□□ -0.92
SMAD3-211ENST00000559460 DEFB110Q30KQ9 67 aa9.32□□□□□ -0.92
SMAD3-211ENST00000559460 TFDP3Q5H9I0 405 aa9.32□□□□□ -0.92
SMAD3-211ENST00000559460 ABHD17BQ5VST6 288 aa9.32□□□□□ -0.92
SMAD3-211ENST00000559460 CNSTQ6PJW8 725 aa9.32□□□□□ -0.92
SMAD3-211ENST00000559460 C3P1Q6ZMU1 363 aa9.32□□□□□ -0.92
SMAD3-211ENST00000559460 SHISA6Q6ZSJ9 500 aa9.32□□□□□ -0.92
SMAD3-211ENST00000559460 GHDCQ8N2G8 530 aa9.32□□□□□ -0.92
SMAD3-211ENST00000559460 C19orf47Q8N9M1 422 aaKnown RBP9.32□□□□□ -0.92
SMAD3-211ENST00000559460 FAM98AQ8NCA5 519 aaKnown RBP9.32□□□□□ -0.92
SMAD3-211ENST00000559460 GPR26Q8NDV2 337 aa9.32□□□□□ -0.92
SMAD3-211ENST00000559460 WFDC11Q8NEX6 87 aa9.32□□□□□ -0.92
SMAD3-211ENST00000559460 MYRIPQ8NFW9 859 aa9.32□□□□□ -0.92
SMAD3-211ENST00000559460 OR11G2Q8NGC1 345 aa9.32□□□□□ -0.92
SMAD3-211ENST00000559460 BRIX1Q8TDN6 353 aaKnown RBP9.32□□□□□ -0.92
SMAD3-211ENST00000559460 KCTD15Q96SI1 283 aaPredicted RBP9.32□□□□□ -0.92
SMAD3-211ENST00000559460 SNRNP25Q9BV90 132 aaKnown RBP9.32□□□□□ -0.92
SMAD3-211ENST00000559460 GPR63Q9BZJ6 419 aa9.32□□□□□ -0.92
SMAD3-211ENST00000559460 WWP1Q9H0M0 922 aa9.32□□□□□ -0.92
SMAD3-211ENST00000559460 CLEC4MQ9H2X3 399 aaPredicted RBP9.32□□□□□ -0.92
SMAD3-211ENST00000559460 SIX2Q9NPC8 291 aa9.32□□□□□ -0.92
SMAD3-211ENST00000559460 DTLQ9NZJ0 730 aa9.32□□□□□ -0.92
SMAD3-211ENST00000559460 NUP210LQ5VU65 1888 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms