RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 PDX1P52945 283 aa13.98□□□□□ -0.17
USP3-205ENST00000557884 GPLD1P80108 840 aa13.98□□□□□ -0.17
USP3-205ENST00000557884 CFHR1Q03591 330 aa13.98□□□□□ -0.17
USP3-205ENST00000557884 KYNUQ16719 465 aa13.98□□□□□ -0.17
USP3-205ENST00000557884 ACSBG2Q5FVE4 666 aa13.98□□□□□ -0.17
USP3-205ENST00000557884 UBAP2Q5T6F2 1119 aaKnown RBP13.98□□□□□ -0.17
USP3-205ENST00000557884 RBM12BQ8IXT5 1001 aaKnown RBP13.98□□□□□ -0.17
USP3-205ENST00000557884 GSPT2Q8IYD1 628 aaKnown RBP13.98□□□□□ -0.17
USP3-205ENST00000557884 SLC22A15Q8IZD6 547 aa13.98□□□□□ -0.17
USP3-205ENST00000557884 DCBLD1Q8N8Z6 715 aa13.98□□□□□ -0.17
USP3-205ENST00000557884 GPATCH11Q8N954 259 aa13.98□□□□□ -0.17
USP3-205ENST00000557884 OR5AR1Q8NGP9 310 aa13.98□□□□□ -0.17
USP3-205ENST00000557884 GIMAP7Q8NHV1 300 aa13.98□□□□□ -0.17
USP3-205ENST00000557884 NCSTNQ92542 709 aa13.98□□□□□ -0.17
USP3-205ENST00000557884 GPR21Q99679 349 aa13.98□□□□□ -0.17
USP3-205ENST00000557884 NRTNQ99748 197 aa13.98□□□□□ -0.17
USP3-205ENST00000557884 UCK1Q9HA47 277 aa13.98□□□□□ -0.17
USP3-205ENST00000557884 NINJ2Q9NZG7 142 aa13.98□□□□□ -0.17
USP3-205ENST00000557884 TMEM9Q9P0T7 183 aa13.98□□□□□ -0.17
USP3-205ENST00000557884 ANGPTL2Q9UKU9 493 aa13.98□□□□□ -0.17
USP3-205ENST00000557884 RUVBL2Q9Y230 463 aaKnown RBP13.98□□□□□ -0.17
USP3-205ENST00000557884 ASF1AQ9Y294 204 aa13.98□□□□□ -0.17
USP3-205ENST00000557884 MED16Q9Y2X0 877 aa13.98□□□□□ -0.17
USP3-205ENST00000557884 COLEC10Q9Y6Z7 277 aa13.98□□□□□ -0.17
USP3-205ENST00000557884 ASXL3Q9C0F0 2248 aa13.98□□□□□ -0.17
USP3-205ENST00000557884 ARHGEF17Q96PE2 2063 aaPredicted RBP13.97□□□□□ -0.17
USP3-205ENST00000557884 KPNA5O15131 536 aa13.97□□□□□ -0.17
USP3-205ENST00000557884 SLCO2B1O94956 709 aa13.97□□□□□ -0.17
USP3-205ENST00000557884 GSTA2P09210 222 aa13.97□□□□□ -0.17
USP3-205ENST00000557884 AMD1P17707 334 aa13.97□□□□□ -0.17
USP3-205ENST00000557884 CLCN7P51798 805 aa13.97□□□□□ -0.17
USP3-205ENST00000557884 PGGT1BP53609 377 aa13.97□□□□□ -0.17
USP3-205ENST00000557884 EPHA4P54764 986 aa13.97□□□□□ -0.17
USP3-205ENST00000557884 CDKN2DP55273 166 aa13.97□□□□□ -0.17
USP3-205ENST00000557884 EFTUD2Q15029 972 aaKnown RBP eCLIP13.97□□□□□ -0.171e-7■■■□□ 15.5
USP3-205ENST00000557884 ISXQ2M1V0 245 aa13.97□□□□□ -0.17
USP3-205ENST00000557884 SNAP47Q5SQN1 464 aa13.97□□□□□ -0.17
USP3-205ENST00000557884 PLEKHS1Q5SXH7 462 aa13.97□□□□□ -0.17
USP3-205ENST00000557884 PHF19Q5T6S3 580 aa13.97□□□□□ -0.17
USP3-205ENST00000557884 CCNI2Q6ZMN8 369 aaPredicted RBP13.97□□□□□ -0.17
USP3-205ENST00000557884 CEP128Q6ZU80 1094 aa13.97□□□□□ -0.17
USP3-205ENST00000557884 PIM3Q86V86 326 aa13.97□□□□□ -0.17
USP3-205ENST00000557884 CTAGE3PQ8IX95 158 aa13.97□□□□□ -0.17
USP3-205ENST00000557884 FBF1Q8TES7 1133 aa13.97□□□□□ -0.17
USP3-205ENST00000557884 RSC1A1Q92681 617 aa13.97□□□□□ -0.17
USP3-205ENST00000557884 KCNJ9Q92806 393 aa13.97□□□□□ -0.17
USP3-205ENST00000557884 SEMA6CQ9H3T2 930 aa13.97□□□□□ -0.17
USP3-205ENST00000557884 KIR3DX1Q9H7L2 352 aa13.97□□□□□ -0.17
USP3-205ENST00000557884 MVB12BQ9H7P6 319 aa13.97□□□□□ -0.17
USP3-205ENST00000557884 OGFRQ9NZT2 677 aa13.97□□□□□ -0.17
USP3-205ENST00000557884 KLHL3Q9UH77 587 aa13.97□□□□□ -0.17
USP3-205ENST00000557884 CIDEBQ9UHD4 219 aa13.97□□□□□ -0.17
USP3-205ENST00000557884 SLC24A2Q9UI40 661 aa13.97□□□□□ -0.17
USP3-205ENST00000557884 TRMT6Q9UJA5 497 aaKnown RBP13.97□□□□□ -0.17
USP3-205ENST00000557884 TDRKHQ9Y2W6 561 aaKnown RBP13.97□□□□□ -0.17
USP3-205ENST00000557884 NEUROG3Q9Y4Z2 214 aa13.97□□□□□ -0.17
USP3-205ENST00000557884 COMMD10Q9Y6G5 202 aa13.97□□□□□ -0.17
USP3-205ENST00000557884 FRYQ5TBA9 3013 aa13.97□□□□□ -0.17
USP3-205ENST00000557884 FAM159BA6NKW6 160 aa13.96□□□□□ -0.17
USP3-205ENST00000557884 VPS26AO75436 327 aa13.96□□□□□ -0.17
USP3-205ENST00000557884 SAT1P21673 171 aa13.96□□□□□ -0.17
USP3-205ENST00000557884 MCM3P25205 808 aa13.96□□□□□ -0.17
USP3-205ENST00000557884 NDUFS1P28331 727 aa13.96□□□□□ -0.17
USP3-205ENST00000557884 STX2P32856 288 aa13.96□□□□□ -0.17
USP3-205ENST00000557884 INHBCP55103 352 aa13.96□□□□□ -0.17
USP3-205ENST00000557884 GFERP55789 205 aa13.96□□□□□ -0.17
USP3-205ENST00000557884 TIAL1Q01085 375 aaKnown RBP eCLIP13.96□□□□□ -0.17
USP3-205ENST00000557884 HECTD2Q5U5R9 776 aa13.96□□□□□ -0.17
USP3-205ENST00000557884 ZNF574Q6ZN55 896 aaPredicted RBP13.96□□□□□ -0.17
USP3-205ENST00000557884 GALNT7Q86SF2 657 aa13.96□□□□□ -0.17
USP3-205ENST00000557884 SLC26A11Q86WA9 606 aa13.96□□□□□ -0.17
USP3-205ENST00000557884 PPM1NQ8N819 430 aa13.96□□□□□ -0.17
USP3-205ENST00000557884 OR52E1Q8NGJ3 308 aa13.96□□□□□ -0.17
USP3-205ENST00000557884 CD200R1Q8TD46 325 aa13.96□□□□□ -0.17
USP3-205ENST00000557884 LCN9Q8WX39 176 aa13.96□□□□□ -0.17
USP3-205ENST00000557884 CDKL2Q92772 493 aa13.96□□□□□ -0.17
USP3-205ENST00000557884 INPP5DQ92835 1189 aa13.96□□□□□ -0.17
USP3-205ENST00000557884 ELMO2Q96JJ3 720 aa13.96□□□□□ -0.17
USP3-205ENST00000557884 TRIT1Q9H3H1 467 aaKnown RBP13.96□□□□□ -0.17
USP3-205ENST00000557884 CDC42EP4Q9H3Q1 356 aaKnown RBP13.96□□□□□ -0.17
USP3-205ENST00000557884 XKR8Q9H6D3 395 aa13.96□□□□□ -0.17
USP3-205ENST00000557884 NSMCE4AQ9NXX6 385 aa13.96□□□□□ -0.17
USP3-205ENST00000557884 PLAGL1Q9UM63 463 aa13.96□□□□□ -0.17
USP3-205ENST00000557884 DHRS7Q9Y394 339 aa13.96□□□□□ -0.17
USP3-205ENST00000557884 ENTPD2Q9Y5L3 495 aa13.96□□□□□ -0.17
USP3-205ENST00000557884 NFS1Q9Y697 457 aa13.96□□□□□ -0.17
USP3-205ENST00000557884 IGHV5-10-1A0A0J9YXX1 117 aa13.95□□□□□ -0.18
USP3-205ENST00000557884 OR6C74A6NCV1 312 aa13.95□□□□□ -0.18
USP3-205ENST00000557884 A8MU76 341 aa13.95□□□□□ -0.18
USP3-205ENST00000557884 SPAG6O75602 509 aa13.95□□□□□ -0.18
USP3-205ENST00000557884 SLU7O95391 586 aaKnown RBP13.95□□□□□ -0.18
USP3-205ENST00000557884 ACSL3O95573 720 aa13.95□□□□□ -0.18
USP3-205ENST00000557884 C1QAP02745 245 aa13.95□□□□□ -0.18
USP3-205ENST00000557884 CAPZBP47756 277 aa13.95□□□□□ -0.18
USP3-205ENST00000557884 PPP1CAP62136 330 aa13.95□□□□□ -0.18
USP3-205ENST00000557884 SHC2P98077 582 aa13.95□□□□□ -0.18
USP3-205ENST00000557884 GBX1Q14549 363 aa13.95□□□□□ -0.18
USP3-205ENST00000557884 KLHL38Q2WGJ6 581 aa13.95□□□□□ -0.18
USP3-205ENST00000557884 TTLL9Q3SXZ7 439 aa13.95□□□□□ -0.18
USP3-205ENST00000557884 KBTBD12Q3ZCT8 623 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms