RNA–Protein interactions for RNA: ENST00000557566.1

SPTLC2-206, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-206ENST00000557566 ADAM9Q13443 819 aa6.72□□□□□ -1.33
SPTLC2-206ENST00000557566 EIF4EBP2Q13542 120 aaPredicted RBP6.72□□□□□ -1.33
SPTLC2-206ENST00000557566 STILQ15468 1287 aa6.72□□□□□ -1.33
SPTLC2-206ENST00000557566 PDCD2Q16342 344 aaPredicted RBP6.72□□□□□ -1.33
SPTLC2-206ENST00000557566 TMEM52BQ4KMG9 183 aa6.72□□□□□ -1.33
SPTLC2-206ENST00000557566 VWA2Q5GFL6 755 aa6.72□□□□□ -1.33
SPTLC2-206ENST00000557566 EXOSC6Q5RKV6 272 aaKnown RBP6.72□□□□□ -1.33
SPTLC2-206ENST00000557566 WDR74Q6RFH5 385 aaPredicted RBP6.72□□□□□ -1.33
SPTLC2-206ENST00000557566 RGS9BPQ6ZS82 235 aa6.72□□□□□ -1.33
SPTLC2-206ENST00000557566 SPATA21Q7Z572 469 aa6.72□□□□□ -1.33
SPTLC2-206ENST00000557566 DAAM2Q86T65 1068 aa6.72□□□□□ -1.33
SPTLC2-206ENST00000557566 TBC1D1Q86TI0 1168 aaPredicted RBP6.72□□□□□ -1.33
SPTLC2-206ENST00000557566 LMNTD2Q8IXW0 634 aa6.72□□□□□ -1.33
SPTLC2-206ENST00000557566 RIBC1Q8N443 379 aaPredicted RBP6.72□□□□□ -1.33
SPTLC2-206ENST00000557566 UBL4BQ8N7F7 174 aa6.72□□□□□ -1.33
SPTLC2-206ENST00000557566 ENDOVQ8N8Q3 282 aaKnown RBP6.72□□□□□ -1.33
SPTLC2-206ENST00000557566 GLIS1Q8NBF1 620 aa6.72□□□□□ -1.33
SPTLC2-206ENST00000557566 FBXL13Q8NEE6 735 aa6.72□□□□□ -1.33
SPTLC2-206ENST00000557566 MAIP1Q8WWC4 291 aa6.72□□□□□ -1.33
SPTLC2-206ENST00000557566 PATE1Q8WXA2 126 aa6.72□□□□□ -1.33
SPTLC2-206ENST00000557566 CTNNBL1Q8WYA6 563 aaPredicted RBP6.72□□□□□ -1.33
SPTLC2-206ENST00000557566 SEMA4DQ92854 862 aa6.72□□□□□ -1.33
SPTLC2-206ENST00000557566 FUBP1Q96AE4 644 aaKnown RBP6.72□□□□□ -1.33
SPTLC2-206ENST00000557566 ISG20Q96AZ6 181 aaKnown RBP6.72□□□□□ -1.33
SPTLC2-206ENST00000557566 KLHL29Q96CT2 875 aa6.72□□□□□ -1.33
SPTLC2-206ENST00000557566 ZNF570Q96NI8 536 aa6.72□□□□□ -1.33
SPTLC2-206ENST00000557566 SLC38A3Q99624 504 aa6.72□□□□□ -1.33
SPTLC2-206ENST00000557566 ELAC2Q9BQ52 826 aaKnown RBP6.72□□□□□ -1.33
SPTLC2-206ENST00000557566 SELENOSQ9BQE4 189 aa6.72□□□□□ -1.33
SPTLC2-206ENST00000557566 SYT11Q9BT88 431 aa6.72□□□□□ -1.33
SPTLC2-206ENST00000557566 AP1M1Q9BXS5 423 aa6.72□□□□□ -1.33
SPTLC2-206ENST00000557566 TMPRSS13Q9BYE2 586 aa6.72□□□□□ -1.33
SPTLC2-206ENST00000557566 STK33Q9BYT3 514 aa6.72□□□□□ -1.33
SPTLC2-206ENST00000557566 LRMDAQ9H2I8 198 aa6.72□□□□□ -1.33
SPTLC2-206ENST00000557566 ACTL8Q9H568 366 aa6.72□□□□□ -1.33
SPTLC2-206ENST00000557566 ATP13A1Q9HD20 1204 aa6.72□□□□□ -1.33
SPTLC2-206ENST00000557566 AGPAT4Q9NRZ5 378 aa6.72□□□□□ -1.33
SPTLC2-206ENST00000557566 DDIT4Q9NX09 232 aa6.72□□□□□ -1.33
SPTLC2-206ENST00000557566 RAB20Q9NX57 234 aa6.72□□□□□ -1.33
SPTLC2-206ENST00000557566 GRHL1Q9NZI5 618 aa6.72□□□□□ -1.33
SPTLC2-206ENST00000557566 UBP1Q9NZI7 540 aa6.72□□□□□ -1.33
SPTLC2-206ENST00000557566 COX16Q9P0S2 106 aa6.72□□□□□ -1.33
SPTLC2-206ENST00000557566 WHRNQ9P202 907 aa6.72□□□□□ -1.33
SPTLC2-206ENST00000557566 PADI1Q9ULC6 663 aa6.72□□□□□ -1.33
SPTLC2-206ENST00000557566 PACSIN2Q9UNF0 486 aaPredicted RBP6.72□□□□□ -1.33
SPTLC2-206ENST00000557566 OSGIN2Q9Y236 505 aa6.72□□□□□ -1.33
SPTLC2-206ENST00000557566 B3GNT3Q9Y2A9 372 aa6.72□□□□□ -1.33
SPTLC2-206ENST00000557566 ATP8A1Q9Y2Q0 1164 aa6.72□□□□□ -1.33
SPTLC2-206ENST00000557566 PCDHA3Q9Y5H8 950 aa6.72□□□□□ -1.33
SPTLC2-206ENST00000557566 HS3ST4Q9Y661 456 aa6.72□□□□□ -1.33
SPTLC2-206ENST00000557566 A0A1B0GUH1 482 aa6.71□□□□□ -1.34
SPTLC2-206ENST00000557566 ILVBLA1L0T0 632 aa6.71□□□□□ -1.34
SPTLC2-206ENST00000557566 DDX3XO00571 662 aaKnown RBP eCLIP6.71□□□□□ -1.34
SPTLC2-206ENST00000557566 PRICKLE3O43900 615 aaPredicted RBP6.71□□□□□ -1.34
SPTLC2-206ENST00000557566 ZMPSTE24O75844 475 aa6.71□□□□□ -1.34
SPTLC2-206ENST00000557566 SNUPNO95149 360 aaKnown RBP6.71□□□□□ -1.34
SPTLC2-206ENST00000557566 POP4O95707 220 aaKnown RBP6.71□□□□□ -1.34
SPTLC2-206ENST00000557566 GSRP00390 522 aa6.71□□□□□ -1.34
SPTLC2-206ENST00000557566 FGGP02679 453 aa6.71□□□□□ -1.34
SPTLC2-206ENST00000557566 HOXC4P09017 264 aaPredicted RBP6.71□□□□□ -1.34
SPTLC2-206ENST00000557566 GSTA2P09210 222 aa6.71□□□□□ -1.34
SPTLC2-206ENST00000557566 ACADSP16219 412 aa6.71□□□□□ -1.34
SPTLC2-206ENST00000557566 PECAM1P16284 738 aaPredicted RBP6.71□□□□□ -1.34
SPTLC2-206ENST00000557566 GNAZP19086 355 aa6.71□□□□□ -1.34
SPTLC2-206ENST00000557566 ATP6V1C1P21283 382 aa6.71□□□□□ -1.34
SPTLC2-206ENST00000557566 CALB2P22676 271 aa6.71□□□□□ -1.34
SPTLC2-206ENST00000557566 NR2F2P24468 414 aa6.71□□□□□ -1.34
SPTLC2-206ENST00000557566 OR1E1P30953 314 aa6.71□□□□□ -1.34
SPTLC2-206ENST00000557566 GTF2H1P32780 548 aa6.71□□□□□ -1.34
SPTLC2-206ENST00000557566 ACADSBP45954 432 aa6.71□□□□□ -1.34
SPTLC2-206ENST00000557566 RASSF2P50749 326 aa6.71□□□□□ -1.34
SPTLC2-206ENST00000557566 SUOXP51687 545 aa6.71□□□□□ -1.34
SPTLC2-206ENST00000557566 NDST2P52849 883 aa6.71□□□□□ -1.34
SPTLC2-206ENST00000557566 PITX1P78337 314 aaPredicted RBP6.71□□□□□ -1.34
SPTLC2-206ENST00000557566 ARF5P84085 180 aa6.71□□□□□ -1.34
SPTLC2-206ENST00000557566 CUL2Q13617 745 aa6.71□□□□□ -1.34
SPTLC2-206ENST00000557566 SLC29A2Q14542 456 aa6.71□□□□□ -1.34
SPTLC2-206ENST00000557566 POLD3Q15054 466 aaPredicted RBP6.71□□□□□ -1.34
SPTLC2-206ENST00000557566 PLEKHN1Q494U1 663 aaPredicted RBP6.71□□□□□ -1.34
SPTLC2-206ENST00000557566 ALFQ53S48 1182 aa6.71□□□□□ -1.34
SPTLC2-206ENST00000557566 ANKRD20A2Q5SQ80 823 aa6.71□□□□□ -1.34
SPTLC2-206ENST00000557566 ANKRD20A1Q5TYW2 823 aa6.71□□□□□ -1.34
SPTLC2-206ENST00000557566 ANKRD20A3Q5VUR7 823 aa6.71□□□□□ -1.34
SPTLC2-206ENST00000557566 SLC30A9Q6PML9 568 aa6.71□□□□□ -1.34
SPTLC2-206ENST00000557566 GDPD4Q6W3E5 623 aa6.71□□□□□ -1.34
SPTLC2-206ENST00000557566 PPP1R21Q6ZMI0 780 aa6.71□□□□□ -1.34
SPTLC2-206ENST00000557566 ZNF783Q6ZMS7 281 aa6.71□□□□□ -1.34
SPTLC2-206ENST00000557566 TFAP2DQ7Z6R9 452 aa6.71□□□□□ -1.34
SPTLC2-206ENST00000557566 SYVN1Q86TM6 617 aa6.71□□□□□ -1.34
SPTLC2-206ENST00000557566 NRROSQ86YC3 692 aa6.71□□□□□ -1.34
SPTLC2-206ENST00000557566 RASGRP3Q8IV61 690 aa6.71□□□□□ -1.34
SPTLC2-206ENST00000557566 NAGSQ8N159 534 aa6.71□□□□□ -1.34
SPTLC2-206ENST00000557566 FDCSPQ8NFU4 85 aa6.71□□□□□ -1.34
SPTLC2-206ENST00000557566 OR7D4Q8NG98 312 aa6.71□□□□□ -1.34
SPTLC2-206ENST00000557566 OR2AP1Q8NGE2 309 aa6.71□□□□□ -1.34
SPTLC2-206ENST00000557566 ZNF398Q8TD17 642 aa6.71□□□□□ -1.34
SPTLC2-206ENST00000557566 CT55Q8WUE5 264 aa6.71□□□□□ -1.34
SPTLC2-206ENST00000557566 TFAP2BQ92481 460 aa6.71□□□□□ -1.34
SPTLC2-206ENST00000557566 MEGF10Q96KG7 1140 aa6.71□□□□□ -1.34
SPTLC2-206ENST00000557566 MAGEB18Q96M61 343 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms