RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 TNK1Q13470 666 aa3.04□□□□□ -1.92
TRAV28-201ENST00000557548 HNF4GQ14541 408 aa3.04□□□□□ -1.92
TRAV28-201ENST00000557548 ODF3L2Q3SX64 289 aa3.04□□□□□ -1.92
TRAV28-201ENST00000557548 IQCCQ4KMZ1 466 aa3.04□□□□□ -1.92
TRAV28-201ENST00000557548 GAGE2EQ4V326 116 aa3.04□□□□□ -1.92
TRAV28-201ENST00000557548 MDH1BQ5I0G3 518 aa3.04□□□□□ -1.92
TRAV28-201ENST00000557548 WASHC2DQ5SRD0 308 aa3.04□□□□□ -1.92
TRAV28-201ENST00000557548 ETFRF1Q6IPR1 90 aa3.04□□□□□ -1.92
TRAV28-201ENST00000557548 TYW3Q6IPR3 259 aaKnown RBP3.04□□□□□ -1.92
TRAV28-201ENST00000557548 PRR27Q6MZM9 219 aa3.04□□□□□ -1.92
TRAV28-201ENST00000557548 GAGE2AQ6NT46 116 aa3.04□□□□□ -1.92
TRAV28-201ENST00000557548 MFSD12Q6NUT3 480 aa3.04□□□□□ -1.92
TRAV28-201ENST00000557548 RGMBQ6NW40 437 aa3.04□□□□□ -1.92
TRAV28-201ENST00000557548 BRAT1Q6PJG6 821 aa3.04□□□□□ -1.92
TRAV28-201ENST00000557548 Q6ZTK2 550 aa3.04□□□□□ -1.92
TRAV28-201ENST00000557548 PIGWQ7Z7B1 504 aa3.04□□□□□ -1.92
TRAV28-201ENST00000557548 FAM114A1Q8IWE2 563 aa3.04□□□□□ -1.92
TRAV28-201ENST00000557548 CCDC83Q8IWF9 413 aa3.04□□□□□ -1.92
TRAV28-201ENST00000557548 LMNTD2Q8IXW0 634 aa3.04□□□□□ -1.92
TRAV28-201ENST00000557548 C1orf52Q8N6N3 182 aaKnown RBP3.04□□□□□ -1.92
TRAV28-201ENST00000557548 ZNF611Q8N823 705 aa3.04□□□□□ -1.92
TRAV28-201ENST00000557548 NEK11Q8NG66 645 aa3.04□□□□□ -1.92
TRAV28-201ENST00000557548 OR5R1Q8NH85 324 aa3.04□□□□□ -1.92
TRAV28-201ENST00000557548 OIT3Q8WWZ8 545 aa3.04□□□□□ -1.92
TRAV28-201ENST00000557548 DNAAF4Q8WXU2 420 aa3.04□□□□□ -1.92
TRAV28-201ENST00000557548 SYN2Q92777 582 aaPredicted RBP3.04□□□□□ -1.92
TRAV28-201ENST00000557548 DPF1Q92782 380 aa3.04□□□□□ -1.92
TRAV28-201ENST00000557548 RIT1Q92963 219 aa3.04□□□□□ -1.92
TRAV28-201ENST00000557548 LRFN5Q96NI6 719 aa3.04□□□□□ -1.92
TRAV28-201ENST00000557548 OSBPL8Q9BZF1 889 aa3.04□□□□□ -1.92
TRAV28-201ENST00000557548 ABCG4Q9H172 646 aa3.04□□□□□ -1.92
TRAV28-201ENST00000557548 ISCUQ9H1K1 167 aa3.04□□□□□ -1.92
TRAV28-201ENST00000557548 ABCG8Q9H221 673 aa3.04□□□□□ -1.92
TRAV28-201ENST00000557548 C1orf21Q9H246 121 aa3.04□□□□□ -1.92
TRAV28-201ENST00000557548 FOXP1Q9H334 677 aaPredicted RBP3.04□□□□□ -1.92
TRAV28-201ENST00000557548 ANO10Q9NW15 660 aa3.04□□□□□ -1.92
TRAV28-201ENST00000557548 P4HTMQ9NXG6 502 aa3.04□□□□□ -1.92
TRAV28-201ENST00000557548 VPS18Q9P253 973 aa3.04□□□□□ -1.92
TRAV28-201ENST00000557548 GAGE2DQ9UEU5 116 aa3.04□□□□□ -1.92
TRAV28-201ENST00000557548 IL19Q9UHD0 177 aa3.04□□□□□ -1.92
TRAV28-201ENST00000557548 FBXW2Q9UKT8 454 aa3.04□□□□□ -1.92
TRAV28-201ENST00000557548 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.04□□□□□ -1.92
TRAV28-201ENST00000557548 CCDC180Q9P1Z9 1646 aa3.04□□□□□ -1.92
TRAV28-201ENST00000557548 A0A1W2PP11 408 aa3.03□□□□□ -1.92
TRAV28-201ENST00000557548 hDV102S1A0JD36 115 aa3.03□□□□□ -1.92
TRAV28-201ENST00000557548 FAM90A10PA6NDY2 464 aa3.03□□□□□ -1.92
TRAV28-201ENST00000557548 E5RJQ4 531 aa3.03□□□□□ -1.92
TRAV28-201ENST00000557548 H0YGN5 161 aa3.03□□□□□ -1.92
TRAV28-201ENST00000557548 TMEM178BH3BS89 294 aa3.03□□□□□ -1.92
TRAV28-201ENST00000557548 CTDSPLO15194 276 aa3.03□□□□□ -1.92
TRAV28-201ENST00000557548 PRPSAP2O60256 369 aa3.03□□□□□ -1.92
TRAV28-201ENST00000557548 FCGR3BO75015 233 aa3.03□□□□□ -1.92
TRAV28-201ENST00000557548 PROP1O75360 226 aa3.03□□□□□ -1.92
TRAV28-201ENST00000557548 REC8O95072 547 aa3.03□□□□□ -1.92
TRAV28-201ENST00000557548 SPP1P10451 314 aa3.03□□□□□ -1.92
TRAV28-201ENST00000557548 ARSBP15848 533 aa3.03□□□□□ -1.92
TRAV28-201ENST00000557548 CERS1P27544 350 aa3.03□□□□□ -1.92
TRAV28-201ENST00000557548 SERPINB6P35237 376 aa3.03□□□□□ -1.92
TRAV28-201ENST00000557548 FRKP42685 505 aaPredicted RBP3.03□□□□□ -1.92
TRAV28-201ENST00000557548 RFX5P48382 616 aaPredicted RBP3.03□□□□□ -1.92
TRAV28-201ENST00000557548 SLC9A3P48764 834 aa3.03□□□□□ -1.92
TRAV28-201ENST00000557548 GMPSP49915 693 aaPredicted RBP3.03□□□□□ -1.92
TRAV28-201ENST00000557548 ENTPD1P49961 510 aa3.03□□□□□ -1.92
TRAV28-201ENST00000557548 RASSF2P50749 326 aa3.03□□□□□ -1.92
TRAV28-201ENST00000557548 CLCNKAP51800 687 aa3.03□□□□□ -1.92
TRAV28-201ENST00000557548 LUMP51884 338 aaPredicted RBP3.03□□□□□ -1.92
TRAV28-201ENST00000557548 ZNF131P52739 623 aa3.03□□□□□ -1.92
TRAV28-201ENST00000557548 CTSCP53634 463 aa3.03□□□□□ -1.92
TRAV28-201ENST00000557548 CASP9P55211 416 aa3.03□□□□□ -1.92
TRAV28-201ENST00000557548 HSD17B7P56937 341 aa3.03□□□□□ -1.92
TRAV28-201ENST00000557548 STARD6P59095 220 aa3.03□□□□□ -1.92
TRAV28-201ENST00000557548 SEC61BP60468 96 aaKnown RBP3.03□□□□□ -1.92
TRAV28-201ENST00000557548 COG7P83436 770 aa3.03□□□□□ -1.92
TRAV28-201ENST00000557548 FOLH1Q04609 750 aa3.03□□□□□ -1.92
TRAV28-201ENST00000557548 CRYZQ08257 329 aaKnown RBP3.03□□□□□ -1.92
TRAV28-201ENST00000557548 DAZAP2Q15038 168 aaPredicted RBP3.03□□□□□ -1.92
TRAV28-201ENST00000557548 SGCBQ16585 318 aa3.03□□□□□ -1.92
TRAV28-201ENST00000557548 AMZ1Q400G9 498 aa3.03□□□□□ -1.92
TRAV28-201ENST00000557548 GCNT6Q5T4J0 391 aa3.03□□□□□ -1.92
TRAV28-201ENST00000557548 SLC18B1Q6NT16 456 aa3.03□□□□□ -1.92
TRAV28-201ENST00000557548 PODNL1Q6PEZ8 512 aa3.03□□□□□ -1.92
TRAV28-201ENST00000557548 TRAPPC11Q7Z392 1133 aa3.03□□□□□ -1.92
TRAV28-201ENST00000557548 TMPRSS11BQ86T26 416 aa3.03□□□□□ -1.92
TRAV28-201ENST00000557548 RPAINQ86UA6 219 aa3.03□□□□□ -1.92
TRAV28-201ENST00000557548 NLRP14Q86W24 1093 aa3.03□□□□□ -1.92
TRAV28-201ENST00000557548 LDLRAD3Q86YD5 345 aa3.03□□□□□ -1.92
TRAV28-201ENST00000557548 FOXP4Q8IVH2 680 aaPredicted RBP3.03□□□□□ -1.92
TRAV28-201ENST00000557548 C4orf19Q8IY42 314 aa3.03□□□□□ -1.92
TRAV28-201ENST00000557548 TMEM199Q8N511 208 aa3.03□□□□□ -1.92
TRAV28-201ENST00000557548 C7orf57Q8NEG2 295 aa3.03□□□□□ -1.92
TRAV28-201ENST00000557548 OR5M8Q8NGP6 311 aa3.03□□□□□ -1.92
TRAV28-201ENST00000557548 OR52I2Q8NH67 350 aa3.03□□□□□ -1.92
TRAV28-201ENST00000557548 DENND1AQ8TEH3 1009 aa3.03□□□□□ -1.92
TRAV28-201ENST00000557548 PPP4R1Q8TF05 950 aa3.03□□□□□ -1.92
TRAV28-201ENST00000557548 SLC38A5Q8WUX1 472 aa3.03□□□□□ -1.92
TRAV28-201ENST00000557548 SMPDL3BQ92485 455 aa3.03□□□□□ -1.92
TRAV28-201ENST00000557548 LPAR1Q92633 364 aa3.03□□□□□ -1.92
TRAV28-201ENST00000557548 TAF4BQ92750 862 aa3.03□□□□□ -1.92
TRAV28-201ENST00000557548 BCL2L2Q92843 193 aaPredicted RBP3.03□□□□□ -1.92
TRAV28-201ENST00000557548 SLC25A28Q96A46 364 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms