RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 CRLS1Q9UJA2 301 aa13.67□□□□□ -0.22
SLIRP-210ENST00000557431 UNC79Q9P2D8 2635 aa13.67□□□□□ -0.22
SLIRP-210ENST00000557431 hCG_1818297A0A087WSY0 165 aa13.66□□□□□ -0.22
SLIRP-210ENST00000557431 SSU72P8A0A1W2PR75 194 aa13.66□□□□□ -0.22
SLIRP-210ENST00000557431 CCDC66A2RUB6 948 aa13.66□□□□□ -0.22
SLIRP-210ENST00000557431 ZNF749O43361 778 aa13.66□□□□□ -0.22
SLIRP-210ENST00000557431 RBL1P28749 1068 aa13.66□□□□□ -0.22
SLIRP-210ENST00000557431 PRDX3P30048 256 aaKnown RBP13.66□□□□□ -0.22
SLIRP-210ENST00000557431 ARHGAP25P42331 645 aa13.66□□□□□ -0.22
SLIRP-210ENST00000557431 NCF4Q15080 339 aa13.66□□□□□ -0.22
SLIRP-210ENST00000557431 TAZQ16635 292 aa13.66□□□□□ -0.22
SLIRP-210ENST00000557431 BCL7AQ4VC05 210 aa13.66□□□□□ -0.22
SLIRP-210ENST00000557431 LRRC38Q5VT99 294 aa13.66□□□□□ -0.22
SLIRP-210ENST00000557431 MLIPQ5VWP3 458 aa13.66□□□□□ -0.22
SLIRP-210ENST00000557431 ZDHHC20Q5W0Z9 365 aa13.66□□□□□ -0.22
SLIRP-210ENST00000557431 ZNF385CQ66K41 422 aaPredicted RBP13.66□□□□□ -0.22
SLIRP-210ENST00000557431 CDHR3Q6ZTQ4 885 aa13.66□□□□□ -0.22
SLIRP-210ENST00000557431 OR52E1Q8NGJ3 308 aa13.66□□□□□ -0.22
SLIRP-210ENST00000557431 DTX3LQ8TDB6 740 aa13.66□□□□□ -0.22
SLIRP-210ENST00000557431 P3H4Q92791 437 aa13.66□□□□□ -0.22
SLIRP-210ENST00000557431 INPP5DQ92835 1189 aa13.66□□□□□ -0.22
SLIRP-210ENST00000557431 SNRNP40Q96DI7 357 aaKnown RBP13.66□□□□□ -0.22
SLIRP-210ENST00000557431 IQCDQ96DY2 449 aa13.66□□□□□ -0.22
SLIRP-210ENST00000557431 RBM41Q96IZ5 413 aaKnown RBP13.66□□□□□ -0.22
SLIRP-210ENST00000557431 TRAPPC9Q96Q05 1148 aa13.66□□□□□ -0.22
SLIRP-210ENST00000557431 RANBP9Q96S59 729 aa13.66□□□□□ -0.22
SLIRP-210ENST00000557431 DNAJC7Q99615 494 aa13.66□□□□□ -0.22
SLIRP-210ENST00000557431 HEMGNQ9BXL5 484 aa13.66□□□□□ -0.22
SLIRP-210ENST00000557431 SRMSQ9H3Y6 488 aa13.66□□□□□ -0.22
SLIRP-210ENST00000557431 ZBTB20Q9HC78 741 aaPredicted RBP13.66□□□□□ -0.22
SLIRP-210ENST00000557431 FAM60AQ9NP50 221 aa13.66□□□□□ -0.22
SLIRP-210ENST00000557431 C1GALT1Q9NS00 363 aa13.66□□□□□ -0.22
SLIRP-210ENST00000557431 LCMT1Q9UIC8 334 aa13.66□□□□□ -0.22
SLIRP-210ENST00000557431 ACSL5Q9ULC5 683 aa13.66□□□□□ -0.22
SLIRP-210ENST00000557431 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.66□□□□□ -0.226e-18■□□□□ 8
SLIRP-210ENST00000557431 CNOT3O75175 753 aaKnown RBP13.65□□□□□ -0.22
SLIRP-210ENST00000557431 ALOX12BO75342 701 aa13.65□□□□□ -0.22
SLIRP-210ENST00000557431 EPOP01588 193 aa13.65□□□□□ -0.22
SLIRP-210ENST00000557431 PSMB4P28070 264 aa13.65□□□□□ -0.22
SLIRP-210ENST00000557431 DCTP40126 519 aa13.65□□□□□ -0.22
SLIRP-210ENST00000557431 NR2C2P49116 596 aa13.65□□□□□ -0.22
SLIRP-210ENST00000557431 PRLHRP49683 370 aa13.65□□□□□ -0.22
SLIRP-210ENST00000557431 TFDP2Q14188 446 aa13.65□□□□□ -0.22
SLIRP-210ENST00000557431 SPARCL1Q14515 664 aa13.65□□□□□ -0.22
SLIRP-210ENST00000557431 NAPRTQ6XQN6 538 aa13.65□□□□□ -0.22
SLIRP-210ENST00000557431 RHOT2Q8IXI1 618 aa13.65□□□□□ -0.22
SLIRP-210ENST00000557431 ACVR1CQ8NER5 493 aa13.65□□□□□ -0.22
SLIRP-210ENST00000557431 OR8K1Q8NGG5 319 aa13.65□□□□□ -0.22
SLIRP-210ENST00000557431 OR8K5Q8NH50 307 aa13.65□□□□□ -0.22
SLIRP-210ENST00000557431 HM13Q8TCT9 377 aa13.65□□□□□ -0.22
SLIRP-210ENST00000557431 PNPLA2Q96AD5 504 aa13.65□□□□□ -0.22
SLIRP-210ENST00000557431 SGSM3Q96HU1 749 aa13.65□□□□□ -0.22
SLIRP-210ENST00000557431 SMAD5Q99717 465 aaKnown RBP13.65□□□□□ -0.22
SLIRP-210ENST00000557431 SLC29A3Q9BZD2 475 aa13.65□□□□□ -0.22
SLIRP-210ENST00000557431 SPRTNQ9H040 489 aaPredicted RBP13.65□□□□□ -0.22
SLIRP-210ENST00000557431 COG4Q9H9E3 785 aa13.65□□□□□ -0.22
SLIRP-210ENST00000557431 NHEJ1Q9H9Q4 299 aaPredicted RBP13.65□□□□□ -0.22
SLIRP-210ENST00000557431 ABHD10Q9NUJ1 306 aa13.65□□□□□ -0.22
SLIRP-210ENST00000557431 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.65□□□□□ -0.22
SLIRP-210ENST00000557431 CDYLQ9Y232 598 aa13.65□□□□□ -0.22
SLIRP-210ENST00000557431 NTNG1Q9Y2I2 539 aa13.65□□□□□ -0.22
SLIRP-210ENST00000557431 COLEC10Q9Y6Z7 277 aa13.65□□□□□ -0.22
SLIRP-210ENST00000557431 MYO9AB2RTY4 2548 aa13.64□□□□□ -0.23
SLIRP-210ENST00000557431 E7EQ34 232 aa13.64□□□□□ -0.23
SLIRP-210ENST00000557431 H7C0C1 242 aa13.64□□□□□ -0.23
SLIRP-210ENST00000557431 LDLRP01130 860 aa13.64□□□□□ -0.23
SLIRP-210ENST00000557431 NDUFS1P28331 727 aa13.64□□□□□ -0.23
SLIRP-210ENST00000557431 ATP5OP48047 213 aa13.64□□□□□ -0.23
SLIRP-210ENST00000557431 TAF1AQ15573 450 aaPredicted RBP13.64□□□□□ -0.23
SLIRP-210ENST00000557431 ZIC1Q15915 447 aa13.64□□□□□ -0.23
SLIRP-210ENST00000557431 MAMDC2Q7Z304 686 aaPredicted RBP13.64□□□□□ -0.23
SLIRP-210ENST00000557431 MRGPREQ86SM8 312 aa13.64□□□□□ -0.23
SLIRP-210ENST00000557431 FAM20CQ8IXL6 584 aa13.64□□□□□ -0.23
SLIRP-210ENST00000557431 ADGRF3Q8IZF5 1079 aa13.64□□□□□ -0.23
SLIRP-210ENST00000557431 TMEM102Q8N9M5 508 aaPredicted RBP13.64□□□□□ -0.23
SLIRP-210ENST00000557431 LMNTD1Q8N9Z9 388 aa13.64□□□□□ -0.23
SLIRP-210ENST00000557431 GLIS1Q8NBF1 620 aa13.64□□□□□ -0.23
SLIRP-210ENST00000557431 KRT35Q92764 455 aa13.64□□□□□ -0.23
SLIRP-210ENST00000557431 DCUN1D1Q96GG9 259 aa13.64□□□□□ -0.23
SLIRP-210ENST00000557431 LINC00615Q96LM1 132 aaPredicted RBP13.64□□□□□ -0.23
SLIRP-210ENST00000557431 GBA3Q9H227 469 aa13.64□□□□□ -0.23
SLIRP-210ENST00000557431 OR52A5Q9H2C5 316 aa13.64□□□□□ -0.23
SLIRP-210ENST00000557431 CUEDC1Q9NWM3 386 aaPredicted RBP13.64□□□□□ -0.23
SLIRP-210ENST00000557431 ACTR10Q9NZ32 417 aa13.64□□□□□ -0.23
SLIRP-210ENST00000557431 DHCR7Q9UBM7 475 aaKnown RBP13.64□□□□□ -0.23
SLIRP-210ENST00000557431 PLAGL1Q9UM63 463 aa13.64□□□□□ -0.23
SLIRP-210ENST00000557431 PTRH2Q9Y3E5 179 aaKnown RBP13.64□□□□□ -0.23
SLIRP-210ENST00000557431 CSAG2Q9Y5P2 127 aa13.64□□□□□ -0.23
SLIRP-210ENST00000557431 ITPR2Q14571 2701 aa13.64□□□□□ -0.23
SLIRP-210ENST00000557431 PRRC2CQ9Y520 2896 aaKnown RBP13.64□□□□□ -0.23
SLIRP-210ENST00000557431 DOPEY1Q5JWR5 2465 aa13.64□□□□□ -0.23
SLIRP-210ENST00000557431 HEATR5BQ9P2D3 2071 aa13.63□□□□□ -0.23
SLIRP-210ENST00000557431 MACROD2A1Z1Q3 448 aa13.63□□□□□ -0.23
SLIRP-210ENST00000557431 CCDC78A2IDD5 438 aa13.63□□□□□ -0.23
SLIRP-210ENST00000557431 C2orf81A6NN90 581 aa13.63□□□□□ -0.23
SLIRP-210ENST00000557431 C9J4A7 227 aa13.63□□□□□ -0.23
SLIRP-210ENST00000557431 KLF7O75840 302 aaPredicted RBP13.63□□□□□ -0.23
SLIRP-210ENST00000557431 CBX6O95503 412 aa13.63□□□□□ -0.23
SLIRP-210ENST00000557431 MC4RP32245 332 aa13.63□□□□□ -0.23
SLIRP-210ENST00000557431 ADRA1AP35348 466 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms