RNA–Protein interactions for RNA: ENST00000557269.5

SHMT2-227, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-227ENST00000557269 SERPINB9P50453 376 aa12.51□□□□□ -0.41
SHMT2-227ENST00000557269 RAB10P61026 200 aa12.51□□□□□ -0.41
SHMT2-227ENST00000557269 IRF9Q00978 393 aa12.51□□□□□ -0.41
SHMT2-227ENST00000557269 PLOD1Q02809 727 aaPredicted RBP12.51□□□□□ -0.41
SHMT2-227ENST00000557269 KIR2DS5Q14953 304 aa12.51□□□□□ -0.41
SHMT2-227ENST00000557269 NR0B2Q15466 257 aa12.51□□□□□ -0.41
SHMT2-227ENST00000557269 PERM1Q5SV97 790 aa12.51□□□□□ -0.41
SHMT2-227ENST00000557269 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.51□□□□□ -0.41
SHMT2-227ENST00000557269 UGT3A1Q6NUS8 523 aa12.51□□□□□ -0.41
SHMT2-227ENST00000557269 GUSBP11Q6P575 273 aa12.51□□□□□ -0.41
SHMT2-227ENST00000557269 FBXO38Q6PIJ6 1188 aa12.51□□□□□ -0.41
SHMT2-227ENST00000557269 ZNF761Q86XN6 746 aaPredicted RBP12.51□□□□□ -0.41
SHMT2-227ENST00000557269 RASGRP3Q8IV61 690 aa12.51□□□□□ -0.41
SHMT2-227ENST00000557269 DEFB124Q8NES8 71 aa12.51□□□□□ -0.41
SHMT2-227ENST00000557269 OR5AR1Q8NGP9 310 aa12.51□□□□□ -0.41
SHMT2-227ENST00000557269 CFAP61Q8NHU2 1237 aa12.51□□□□□ -0.41
SHMT2-227ENST00000557269 MAPK15Q8TD08 544 aa12.51□□□□□ -0.41
SHMT2-227ENST00000557269 MZB1Q8WU39 189 aa12.51□□□□□ -0.41
SHMT2-227ENST00000557269 JPH3Q8WXH2 748 aaPredicted RBP12.51□□□□□ -0.41
SHMT2-227ENST00000557269 TFGQ92734 400 aaPredicted RBP12.51□□□□□ -0.41
SHMT2-227ENST00000557269 LINGO1Q96FE5 620 aa12.51□□□□□ -0.41
SHMT2-227ENST00000557269 CCDC77Q9BR77 488 aa12.51□□□□□ -0.41
SHMT2-227ENST00000557269 UNKQ9C0B0 810 aaKnown RBP12.51□□□□□ -0.41
SHMT2-227ENST00000557269 GPAMQ9HCL2 828 aa12.51□□□□□ -0.41
SHMT2-227ENST00000557269 SLC40A1Q9NP59 571 aa12.51□□□□□ -0.41
SHMT2-227ENST00000557269 SNX15Q9NRS6 342 aa12.51□□□□□ -0.41
SHMT2-227ENST00000557269 PSMC3IPQ9P2W1 217 aaPredicted RBP12.51□□□□□ -0.41
SHMT2-227ENST00000557269 CPNE7Q9UBL6 633 aa12.51□□□□□ -0.41
SHMT2-227ENST00000557269 PADI4Q9UM07 663 aa12.51□□□□□ -0.41
SHMT2-227ENST00000557269 FAM186AA6NE01 2351 aa12.5□□□□□ -0.41
SHMT2-227ENST00000557269 UQCRHLA0A096LP55 91 aa12.5□□□□□ -0.41
SHMT2-227ENST00000557269 TLDC2A0PJX2 215 aa12.5□□□□□ -0.41
SHMT2-227ENST00000557269 CPED1A4D0V7 1026 aa12.5□□□□□ -0.41
SHMT2-227ENST00000557269 OR5K4A6NMS3 321 aa12.5□□□□□ -0.41
SHMT2-227ENST00000557269 RFPL1O75677 317 aa12.5□□□□□ -0.41
SHMT2-227ENST00000557269 KRT38O76015 456 aa12.5□□□□□ -0.41
SHMT2-227ENST00000557269 C2P06681 752 aa12.5□□□□□ -0.41
SHMT2-227ENST00000557269 UQCRHP07919 91 aa12.5□□□□□ -0.41
SHMT2-227ENST00000557269 SNRPAP09012 282 aaKnown RBP12.5□□□□□ -0.41
SHMT2-227ENST00000557269 CKMT1AP12532 417 aa12.5□□□□□ -0.41
SHMT2-227ENST00000557269 MAGEA12P43365 314 aa12.5□□□□□ -0.41
SHMT2-227ENST00000557269 SLC12A2P55011 1212 aa12.5□□□□□ -0.41
SHMT2-227ENST00000557269 IL2P60568 153 aa12.5□□□□□ -0.41
SHMT2-227ENST00000557269 ZNF844Q08AG5 666 aa12.5□□□□□ -0.41
SHMT2-227ENST00000557269 ILF2Q12905 390 aaKnown RBP12.5□□□□□ -0.41
SHMT2-227ENST00000557269 DLG1Q12959 904 aa12.5□□□□□ -0.41
SHMT2-227ENST00000557269 PRKG2Q13237 762 aa12.5□□□□□ -0.41
SHMT2-227ENST00000557269 INAVAQ3KP66 663 aa12.5□□□□□ -0.41
SHMT2-227ENST00000557269 TTLL9Q3SXZ7 439 aa12.5□□□□□ -0.41
SHMT2-227ENST00000557269 CCSMST1Q4G0I0 132 aa12.5□□□□□ -0.41
SHMT2-227ENST00000557269 TDRPQ86YL5 185 aa12.5□□□□□ -0.41
SHMT2-227ENST00000557269 SKA2Q8WVK7 121 aaPredicted RBP12.5□□□□□ -0.41
SHMT2-227ENST00000557269 DLG3Q92796 817 aa12.5□□□□□ -0.41
SHMT2-227ENST00000557269 ISL2Q96A47 359 aa12.5□□□□□ -0.41
SHMT2-227ENST00000557269 CXorf40BQ96DE9 158 aa12.5□□□□□ -0.41
SHMT2-227ENST00000557269 TSPAN17Q96FV3 270 aa12.5□□□□□ -0.41
SHMT2-227ENST00000557269 ZIM3Q96PE6 472 aa12.5□□□□□ -0.41
SHMT2-227ENST00000557269 FERD3LQ96RJ6 166 aa12.5□□□□□ -0.41
SHMT2-227ENST00000557269 POPDC3Q9HBV1 291 aa12.5□□□□□ -0.41
SHMT2-227ENST00000557269 LRIT1Q9P2V4 623 aa12.5□□□□□ -0.41
SHMT2-227ENST00000557269 FTSJ1Q9UET6 329 aa12.5□□□□□ -0.41
SHMT2-227ENST00000557269 CIDEBQ9UHD4 219 aa12.5□□□□□ -0.41
SHMT2-227ENST00000557269 ADAMTS6Q9UKP5 1117 aa12.5□□□□□ -0.41
SHMT2-227ENST00000557269 COL5A1P20908 1838 aaPredicted RBP12.49□□□□□ -0.41
SHMT2-227ENST00000557269 A0A1W2PPM1 405 aa12.49□□□□□ -0.41
SHMT2-227ENST00000557269 EME2A4GXA9 379 aaPredicted RBP12.49□□□□□ -0.41
SHMT2-227ENST00000557269 IFRD1O00458 451 aaPredicted RBP12.49□□□□□ -0.41
SHMT2-227ENST00000557269 RASGRF2O14827 1237 aa12.49□□□□□ -0.41
SHMT2-227ENST00000557269 SLC30A4O14863 429 aa12.49□□□□□ -0.41
SHMT2-227ENST00000557269 KRT37O76014 449 aa12.49□□□□□ -0.41
SHMT2-227ENST00000557269 C1orf105O95561 183 aa12.49□□□□□ -0.41
SHMT2-227ENST00000557269 VIPP01282 170 aa12.49□□□□□ -0.41
SHMT2-227ENST00000557269 CCDC166P0CW27 439 aa12.49□□□□□ -0.41
SHMT2-227ENST00000557269 MPC1LP0DKB6 136 aa12.49□□□□□ -0.41
SHMT2-227ENST00000557269 CBSLP0DN79 551 aa12.49□□□□□ -0.41
SHMT2-227ENST00000557269 ENO3P13929 434 aaPredicted RBP12.49□□□□□ -0.41
SHMT2-227ENST00000557269 SLC2A4P14672 509 aa12.49□□□□□ -0.41
SHMT2-227ENST00000557269 CKMT2P17540 419 aa12.49□□□□□ -0.41
SHMT2-227ENST00000557269 CNTFP26441 200 aa12.49□□□□□ -0.41
SHMT2-227ENST00000557269 CRABP2P29373 138 aa12.49□□□□□ -0.41
SHMT2-227ENST00000557269 TYK2P29597 1187 aa12.49□□□□□ -0.41
SHMT2-227ENST00000557269 CBSP35520 551 aa12.49□□□□□ -0.41
SHMT2-227ENST00000557269 BDKRB1P46663 353 aa12.49□□□□□ -0.41
SHMT2-227ENST00000557269 FASLGP48023 281 aa12.49□□□□□ -0.41
SHMT2-227ENST00000557269 SERPINB8P50452 374 aa12.49□□□□□ -0.41
SHMT2-227ENST00000557269 DAB2P98082 770 aa12.49□□□□□ -0.41
SHMT2-227ENST00000557269 HHEXQ03014 270 aa12.49□□□□□ -0.41
SHMT2-227ENST00000557269 IFFO1Q0D2I5 559 aa12.49□□□□□ -0.41
SHMT2-227ENST00000557269 GPR18Q14330 331 aa12.49□□□□□ -0.41
SHMT2-227ENST00000557269 GRB7Q14451 532 aa12.49□□□□□ -0.41
SHMT2-227ENST00000557269 RASA2Q15283 850 aa12.49□□□□□ -0.41
SHMT2-227ENST00000557269 RSPO4Q2I0M5 234 aaPredicted RBP12.49□□□□□ -0.41
SHMT2-227ENST00000557269 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.49□□□□□ -0.41
SHMT2-227ENST00000557269 TIFABQ6ZNK6 161 aa12.49□□□□□ -0.41
SHMT2-227ENST00000557269 NEK10Q6ZWH5 1172 aa12.49□□□□□ -0.41
SHMT2-227ENST00000557269 RAPH1Q70E73 1250 aa12.49□□□□□ -0.41
SHMT2-227ENST00000557269 EFL1Q7Z2Z2 1120 aaKnown RBP12.49□□□□□ -0.41
SHMT2-227ENST00000557269 SLC9B2Q86UD5 537 aa12.49□□□□□ -0.41
SHMT2-227ENST00000557269 LMNTD1Q8N9Z9 388 aa12.49□□□□□ -0.41
SHMT2-227ENST00000557269 ASB11Q8WXH4 323 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms