RNA–Protein interactions for RNA: ENST00000557159.5

APEX1-216, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 2

Gene APEX1, Length 1,803 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-216ENST00000557159 WNT3AP56704 352 aa12.34□□□□□ -0.43
APEX1-216ENST00000557159 TIAL1Q01085 375 aaKnown RBP eCLIP12.34□□□□□ -0.43
APEX1-216ENST00000557159 PIGFQ07326 219 aa12.34□□□□□ -0.43
APEX1-216ENST00000557159 OR4D1Q15615 310 aa12.34□□□□□ -0.43
APEX1-216ENST00000557159 PFKFB4Q16877 469 aa12.34□□□□□ -0.43
APEX1-216ENST00000557159 SMU1Q2TAY7 513 aa12.34□□□□□ -0.43
APEX1-216ENST00000557159 MANEALQ5VSG8 457 aa12.34□□□□□ -0.43
APEX1-216ENST00000557159 SLC39A5Q6ZMH5 540 aa12.34□□□□□ -0.43
APEX1-216ENST00000557159 USP43Q70EL4 1123 aa12.34□□□□□ -0.43
APEX1-216ENST00000557159 B3GNT8Q7Z7M8 397 aa12.34□□□□□ -0.43
APEX1-216ENST00000557159 PLD3Q8IV08 490 aa12.34□□□□□ -0.43
APEX1-216ENST00000557159 POC5Q8NA72 575 aa12.34□□□□□ -0.43
APEX1-216ENST00000557159 DNAJB8Q8NHS0 232 aa12.34□□□□□ -0.43
APEX1-216ENST00000557159 PROX1Q92786 737 aa12.34□□□□□ -0.43
APEX1-216ENST00000557159 RHBDF1Q96CC6 855 aa12.34□□□□□ -0.43
APEX1-216ENST00000557159 ZHX1-C8orf76Q96EF9 292 aa12.34□□□□□ -0.43
APEX1-216ENST00000557159 PDLIM5Q96HC4 596 aaKnown RBP12.34□□□□□ -0.43
APEX1-216ENST00000557159 TRIM62Q9BVG3 475 aa12.34□□□□□ -0.43
APEX1-216ENST00000557159 ALOXE3Q9BYJ1 711 aa12.34□□□□□ -0.43
APEX1-216ENST00000557159 RNF39Q9H2S5 420 aa12.34□□□□□ -0.43
APEX1-216ENST00000557159 C11orf49Q9H6J7 331 aa12.34□□□□□ -0.43
APEX1-216ENST00000557159 CATSPERBQ9H7T0 1116 aa12.34□□□□□ -0.43
APEX1-216ENST00000557159 ACOT13Q9NPJ3 140 aa12.34□□□□□ -0.43
APEX1-216ENST00000557159 HECAQ9UBI9 543 aaPredicted RBP12.34□□□□□ -0.43
APEX1-216ENST00000557159 OPTCQ9UBM4 332 aa12.34□□□□□ -0.43
APEX1-216ENST00000557159 MKLN1Q9UL63 735 aa12.34□□□□□ -0.43
APEX1-216ENST00000557159 USP22Q9UPT9 525 aa12.34□□□□□ -0.43
APEX1-216ENST00000557159 OR2A25A4D2G3 310 aa12.34□□□□□ -0.43
APEX1-216ENST00000557159 RAD51BO15315 384 aa12.34□□□□□ -0.43
APEX1-216ENST00000557159 RGS10O43665 173 aa12.34□□□□□ -0.43
APEX1-216ENST00000557159 IDH3BO43837 385 aa12.34□□□□□ -0.43
APEX1-216ENST00000557159 CRCPO75575 148 aa12.34□□□□□ -0.43
APEX1-216ENST00000557159 ALX3O95076 343 aa12.34□□□□□ -0.43
APEX1-216ENST00000557159 KRT8P05787 483 aa12.34□□□□□ -0.43
APEX1-216ENST00000557159 THP07101 528 aa12.34□□□□□ -0.43
APEX1-216ENST00000557159 TRAPPC2P0DI81 140 aa12.34□□□□□ -0.43
APEX1-216ENST00000557159 TRAPPC2BP0DI82 140 aa12.34□□□□□ -0.43
APEX1-216ENST00000557159 OGNP20774 298 aaKnown RBP12.34□□□□□ -0.43
APEX1-216ENST00000557159 CXCR2P25025 360 aa12.34□□□□□ -0.43
APEX1-216ENST00000557159 CHRNA4P43681 627 aa12.34□□□□□ -0.43
APEX1-216ENST00000557159 DEFA1P59665 94 aa12.34□□□□□ -0.43
APEX1-216ENST00000557159 DEFA3P59666 94 aa12.34□□□□□ -0.43
APEX1-216ENST00000557159 NCS1P62166 190 aa12.34□□□□□ -0.43
APEX1-216ENST00000557159 SLC13A2Q13183 592 aa12.34□□□□□ -0.43
APEX1-216ENST00000557159 EIF4EBP2Q13542 120 aaPredicted RBP12.34□□□□□ -0.43
APEX1-216ENST00000557159 E2F2Q14209 437 aa12.34□□□□□ -0.43
APEX1-216ENST00000557159 C6orf136Q5SQH8 315 aa12.34□□□□□ -0.43
APEX1-216ENST00000557159 TMEM236Q5W0B7 351 aa12.34□□□□□ -0.43
APEX1-216ENST00000557159 GDF6Q6KF10 455 aaPredicted RBP12.34□□□□□ -0.43
APEX1-216ENST00000557159 KIAA1841Q6NSI8 718 aa12.34□□□□□ -0.43
APEX1-216ENST00000557159 ZNF544Q6NX49 715 aa12.34□□□□□ -0.43
APEX1-216ENST00000557159 SHQ1Q6PI26 577 aaKnown RBP12.34□□□□□ -0.43
APEX1-216ENST00000557159 GPR149Q86SP6 731 aa12.34□□□□□ -0.43
APEX1-216ENST00000557159 OSTM1Q86WC4 334 aa12.34□□□□□ -0.43
APEX1-216ENST00000557159 HOMEZQ8IX15 550 aa12.34□□□□□ -0.43
APEX1-216ENST00000557159 GALNT6Q8NCL4 622 aa12.34□□□□□ -0.43
APEX1-216ENST00000557159 IL17RDQ8NFM7 739 aa12.34□□□□□ -0.43
APEX1-216ENST00000557159 OR2T12Q8NG77 320 aa12.34□□□□□ -0.43
APEX1-216ENST00000557159 SLC38A4Q969I6 547 aa12.34□□□□□ -0.43
APEX1-216ENST00000557159 IMP4Q96G21 291 aaKnown RBP12.34□□□□□ -0.43
APEX1-216ENST00000557159 CELF6Q96J87 481 aaKnown RBP12.34□□□□□ -0.43
APEX1-216ENST00000557159 NSUN5Q96P11 429 aaKnown RBP12.34□□□□□ -0.43
APEX1-216ENST00000557159 KCNA7Q96RP8 456 aa12.34□□□□□ -0.43
APEX1-216ENST00000557159 C17orf80Q9BSJ5 609 aa12.34□□□□□ -0.43
APEX1-216ENST00000557159 CCDC90BQ9GZT6 254 aa12.34□□□□□ -0.43
APEX1-216ENST00000557159 RBM22Q9NW64 420 aaKnown RBP eCLIP12.34□□□□□ -0.43
APEX1-216ENST00000557159 ERVK-18Q9QC07 812 aa12.34□□□□□ -0.43
APEX1-216ENST00000557159 SLCO3A1Q9UIG8 710 aa12.34□□□□□ -0.43
APEX1-216ENST00000557159 GRIP1Q9Y3R0 1128 aa12.34□□□□□ -0.43
APEX1-216ENST00000557159 MICAL3Q7RTP6 2002 aa12.33□□□□□ -0.43
APEX1-216ENST00000557159 NYNRINQ9P2P1 1898 aaKnown RBP12.33□□□□□ -0.44
APEX1-216ENST00000557159 PNMA8CA0A1B0GUJ8 204 aa12.33□□□□□ -0.44
APEX1-216ENST00000557159 LCHNA4D1U4 455 aa12.33□□□□□ -0.44
APEX1-216ENST00000557159 EFCAB9A8MZ26 197 aa12.33□□□□□ -0.44
APEX1-216ENST00000557159 E9PQ18 207 aa12.33□□□□□ -0.44
APEX1-216ENST00000557159 GNGT2O14610 69 aa12.33□□□□□ -0.44
APEX1-216ENST00000557159 HOXC11O43248 304 aaPredicted RBP12.33□□□□□ -0.44
APEX1-216ENST00000557159 NDUFB5O43674 189 aa12.33□□□□□ -0.44
APEX1-216ENST00000557159 PMPCBO75439 489 aa12.33□□□□□ -0.44
APEX1-216ENST00000557159 IGLV3-25P01717 112 aa12.33□□□□□ -0.44
APEX1-216ENST00000557159 S100BP04271 92 aaPredicted RBP12.33□□□□□ -0.44
APEX1-216ENST00000557159 MAGEA2P43356 314 aa12.33□□□□□ -0.44
APEX1-216ENST00000557159 MASP1P48740 699 aa12.33□□□□□ -0.44
APEX1-216ENST00000557159 SCNN1GP51170 649 aa12.33□□□□□ -0.44
APEX1-216ENST00000557159 NRG1Q02297 640 aaPredicted RBP12.33□□□□□ -0.44
APEX1-216ENST00000557159 SOX4Q06945 474 aaPredicted RBP12.33□□□□□ -0.44
APEX1-216ENST00000557159 TRAF3Q13114 568 aa12.33□□□□□ -0.44
APEX1-216ENST00000557159 RAPSNQ13702 412 aa12.33□□□□□ -0.44
APEX1-216ENST00000557159 MAPK11Q15759 364 aa12.33□□□□□ -0.44
APEX1-216ENST00000557159 NKG7Q16617 165 aa12.33□□□□□ -0.44
APEX1-216ENST00000557159 ATP6AP1LQ52LC2 224 aa12.33□□□□□ -0.44
APEX1-216ENST00000557159 BRMS1LQ5PSV4 323 aa12.33□□□□□ -0.44
APEX1-216ENST00000557159 SPESP1Q6UW49 350 aa12.33□□□□□ -0.44
APEX1-216ENST00000557159 BHLHA9Q7RTU4 235 aa12.33□□□□□ -0.44
APEX1-216ENST00000557159 ANKRD33Q7Z3H0 272 aa12.33□□□□□ -0.44
APEX1-216ENST00000557159 FBXO39Q8N4B4 442 aa12.33□□□□□ -0.44
APEX1-216ENST00000557159 AMER2Q8N7J2 671 aa12.33□□□□□ -0.44
APEX1-216ENST00000557159 OR52K2Q8NGK3 314 aa12.33□□□□□ -0.44
APEX1-216ENST00000557159 OR6F1Q8NGZ6 308 aa12.33□□□□□ -0.44
APEX1-216ENST00000557159 APOL4Q9BPW4 351 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms