RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 HEPHQ9BQS7 1158 aa11.2□□□□□ -0.62
SRP54-213ENST00000556994 RHNO1Q9BSD3 238 aa11.2□□□□□ -0.62
SRP54-213ENST00000556994 RBM4Q9BWF3 364 aaKnown RBP11.2□□□□□ -0.62
SRP54-213ENST00000556994 GORASP2Q9H8Y8 452 aa11.2□□□□□ -0.62
SRP54-213ENST00000556994 PDFQ9HBH1 243 aa11.2□□□□□ -0.62
SRP54-213ENST00000556994 ELOVL7A1L3X0 281 aa11.19□□□□□ -0.62
SRP54-213ENST00000556994 ZBBXA8MT70 800 aa11.19□□□□□ -0.62
SRP54-213ENST00000556994 ZNF99A8MXY4 864 aaPredicted RBP11.19□□□□□ -0.62
SRP54-213ENST00000556994 PRLP01236 227 aa11.19□□□□□ -0.62
SRP54-213ENST00000556994 ALDH2P05091 517 aa11.19□□□□□ -0.62
SRP54-213ENST00000556994 DCTP40126 519 aa11.19□□□□□ -0.62
SRP54-213ENST00000556994 THPOP40225 353 aa11.19□□□□□ -0.62
SRP54-213ENST00000556994 HSPA7P48741 367 aa11.19□□□□□ -0.62
SRP54-213ENST00000556994 TMED10P49755 219 aaKnown RBP11.19□□□□□ -0.62
SRP54-213ENST00000556994 RAPSNQ13702 412 aa11.19□□□□□ -0.62
SRP54-213ENST00000556994 GTF2H2Q13888 395 aa11.19□□□□□ -0.62
SRP54-213ENST00000556994 DGCR6Q14129 220 aa11.19□□□□□ -0.62
SRP54-213ENST00000556994 SIM2Q14190 667 aaPredicted RBP11.19□□□□□ -0.62
SRP54-213ENST00000556994 ADPRMQ3LIE5 342 aa11.19□□□□□ -0.62
SRP54-213ENST00000556994 SPANXN4Q5MJ08 99 aa11.19□□□□□ -0.62
SRP54-213ENST00000556994 GTF2H2CQ6P1K8 395 aa11.19□□□□□ -0.62
SRP54-213ENST00000556994 CCDC81Q6ZN84 652 aa11.19□□□□□ -0.62
SRP54-213ENST00000556994 ZNF280BQ86YH2 543 aa11.19□□□□□ -0.62
SRP54-213ENST00000556994 ANKRD13BQ86YJ7 626 aa11.19□□□□□ -0.62
SRP54-213ENST00000556994 MSRB3Q8IXL7 192 aa11.19□□□□□ -0.62
SRP54-213ENST00000556994 CADM3Q8N126 398 aa11.19□□□□□ -0.62
SRP54-213ENST00000556994 PJA1Q8NG27 643 aa11.19□□□□□ -0.62
SRP54-213ENST00000556994 NETO1Q8TDF5 533 aa11.19□□□□□ -0.62
SRP54-213ENST00000556994 FAR1Q8WVX9 515 aa11.19□□□□□ -0.62
SRP54-213ENST00000556994 GLMNQ92990 594 aa11.19□□□□□ -0.62
SRP54-213ENST00000556994 FBXO32Q969P5 355 aa11.19□□□□□ -0.62
SRP54-213ENST00000556994 MTFMTQ96DP5 389 aaKnown RBP11.19□□□□□ -0.62
SRP54-213ENST00000556994 BARD1Q99728 777 aaKnown RBP11.19□□□□□ -0.62
SRP54-213ENST00000556994 SGIP1Q9BQI5 828 aa11.19□□□□□ -0.62
SRP54-213ENST00000556994 HERC2P3Q9BVR0 1158 aa11.19□□□□□ -0.62
SRP54-213ENST00000556994 IPPKQ9H8X2 491 aa11.19□□□□□ -0.62
SRP54-213ENST00000556994 POLE4Q9NR33 117 aa11.19□□□□□ -0.62
SRP54-213ENST00000556994 ERVK-18Q9QC07 812 aa11.19□□□□□ -0.62
SRP54-213ENST00000556994 WDR37Q9Y2I8 494 aa11.19□□□□□ -0.62
SRP54-213ENST00000556994 JRKO75564 520 aa11.19□□□□□ -0.62
SRP54-213ENST00000556994 B3GALT4O96024 378 aa11.19□□□□□ -0.62
SRP54-213ENST00000556994 GSNP06396 782 aa11.19□□□□□ -0.62
SRP54-213ENST00000556994 HOXD9P28356 352 aaPredicted RBP11.19□□□□□ -0.62
SRP54-213ENST00000556994 TGFBR1P36897 503 aa11.19□□□□□ -0.62
SRP54-213ENST00000556994 VAC14Q08AM6 782 aa11.19□□□□□ -0.62
SRP54-213ENST00000556994 TAF10Q12962 218 aa11.19□□□□□ -0.62
SRP54-213ENST00000556994 CDK5R2Q13319 367 aa11.19□□□□□ -0.62
SRP54-213ENST00000556994 PON2Q15165 354 aa11.19□□□□□ -0.62
SRP54-213ENST00000556994 TAF1AQ15573 450 aaPredicted RBP11.19□□□□□ -0.62
SRP54-213ENST00000556994 TRIP4Q15650 581 aaPredicted RBP11.19□□□□□ -0.62
SRP54-213ENST00000556994 FAM110CQ1W6H9 321 aa11.19□□□□□ -0.62
SRP54-213ENST00000556994 GREB1Q4ZG55 1949 aa11.19□□□□□ -0.62
SRP54-213ENST00000556994 GNASQ5JWF2 1037 aa11.19□□□□□ -0.62
SRP54-213ENST00000556994 ZNF691Q5VV52 312 aa11.19□□□□□ -0.62
SRP54-213ENST00000556994 MILR1Q7Z6M3 343 aa11.19□□□□□ -0.62
SRP54-213ENST00000556994 DCP2Q8IU60 420 aaKnown RBP11.19□□□□□ -0.62
SRP54-213ENST00000556994 OR7A2PQ8NGA2 310 aa11.19□□□□□ -0.62
SRP54-213ENST00000556994 OR8J3Q8NGG0 315 aa11.19□□□□□ -0.62
SRP54-213ENST00000556994 MCOLN3Q8TDD5 553 aa11.19□□□□□ -0.62
SRP54-213ENST00000556994 SLC35B4Q969S0 331 aa11.19□□□□□ -0.62
SRP54-213ENST00000556994 MROQ9BYG7 248 aa11.19□□□□□ -0.62
SRP54-213ENST00000556994 FBXO44Q9H4M3 255 aa11.19□□□□□ -0.62
SRP54-213ENST00000556994 NSUN3Q9H649 340 aaKnown RBP11.19□□□□□ -0.62
SRP54-213ENST00000556994 CCSER2Q9H7U1 834 aa11.19□□□□□ -0.62
SRP54-213ENST00000556994 HMG20AQ9NP66 347 aa11.19□□□□□ -0.62
SRP54-213ENST00000556994 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.19□□□□□ -0.62
SRP54-213ENST00000556994 TMEFF2Q9UIK5 374 aaPredicted RBP11.19□□□□□ -0.62
SRP54-213ENST00000556994 NOD1Q9Y239 953 aa11.19□□□□□ -0.62
SRP54-213ENST00000556994 NADKO95544 446 aaPredicted RBP11.18□□□□□ -0.62
SRP54-213ENST00000556994 SERPINA1P01009 418 aa11.18□□□□□ -0.62
SRP54-213ENST00000556994 ITIH1P19827 911 aa11.18□□□□□ -0.62
SRP54-213ENST00000556994 TACR2P21452 398 aa11.18□□□□□ -0.62
SRP54-213ENST00000556994 YBEYP58557 167 aaPredicted RBP11.18□□□□□ -0.62
SRP54-213ENST00000556994 GABARAPL2P60520 117 aa11.18□□□□□ -0.62
SRP54-213ENST00000556994 MAP2K5Q13163 448 aa11.18□□□□□ -0.62
SRP54-213ENST00000556994 MAPK11Q15759 364 aa11.18□□□□□ -0.62
SRP54-213ENST00000556994 INAQ16352 499 aa11.18□□□□□ -0.62
SRP54-213ENST00000556994 LAIR1Q6GTX8 287 aa11.18□□□□□ -0.62
SRP54-213ENST00000556994 DSG4Q86SJ6 1040 aa11.18□□□□□ -0.62
SRP54-213ENST00000556994 EID3Q8N140 333 aa11.18□□□□□ -0.62
SRP54-213ENST00000556994 LIX1Q8N485 282 aa11.18□□□□□ -0.62
SRP54-213ENST00000556994 ARL10Q8N8L6 244 aa11.18□□□□□ -0.62
SRP54-213ENST00000556994 GIPC2Q8TF65 315 aa11.18□□□□□ -0.62
SRP54-213ENST00000556994 HPS1Q92902 700 aa11.18□□□□□ -0.62
SRP54-213ENST00000556994 RDH12Q96NR8 316 aa11.18□□□□□ -0.62
SRP54-213ENST00000556994 CINPQ9BW66 212 aaPredicted RBP11.18□□□□□ -0.62
SRP54-213ENST00000556994 ATP13A3Q9H7F0 1226 aa11.18□□□□□ -0.62
SRP54-213ENST00000556994 AKIP1Q9NQ31 210 aa11.18□□□□□ -0.62
SRP54-213ENST00000556994 ATAD3AQ9NVI7 634 aa11.18□□□□□ -0.62
SRP54-213ENST00000556994 VNN3Q9NY84 501 aa11.18□□□□□ -0.62
SRP54-213ENST00000556994 C3orf18Q9UK00 162 aa11.18□□□□□ -0.62
SRP54-213ENST00000556994 PRG3Q9Y2Y8 225 aaPredicted RBP11.18□□□□□ -0.62
SRP54-213ENST00000556994 NUP214P35658 2090 aaPredicted RBP11.18□□□□□ -0.62
SRP54-213ENST00000556994 A0A0U1RQF3 1178 aa11.18□□□□□ -0.62
SRP54-213ENST00000556994 M0R3G1 203 aa11.18□□□□□ -0.62
SRP54-213ENST00000556994 PRMT5O14744 637 aaPredicted RBP11.18□□□□□ -0.62
SRP54-213ENST00000556994 BCKDKO14874 412 aa11.18□□□□□ -0.62
SRP54-213ENST00000556994 INSIG1O15503 277 aa11.18□□□□□ -0.62
SRP54-213ENST00000556994 CREG1O75629 220 aa11.18□□□□□ -0.62
SRP54-213ENST00000556994 ANGPTL1O95841 491 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms