RNA–Protein interactions for RNA: ENST00000556462.1

LINC01550-206, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 2 BASIC

Gene LINC01550, Length 2,098 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-206ENST00000556462 CCT6BQ92526 530 aa10.59□□□□□ -0.71
LINC01550-206ENST00000556462 TMEM79Q9BSE2 394 aa10.59□□□□□ -0.71
LINC01550-206ENST00000556462 CHRDQ9H2X0 955 aa10.59□□□□□ -0.71
LINC01550-206ENST00000556462 MUTYHQ9UIF7 546 aa10.59□□□□□ -0.71
LINC01550-206ENST00000556462 SLC17A4Q9Y2C5 497 aa10.59□□□□□ -0.71
LINC01550-206ENST00000556462 CA5BQ9Y2D0 317 aa10.59□□□□□ -0.71
LINC01550-206ENST00000556462 TNPO3Q9Y5L0 923 aaKnown RBP10.59□□□□□ -0.71
LINC01550-206ENST00000556462 H0Y8X5 98 aa10.59□□□□□ -0.71
LINC01550-206ENST00000556462 H3BM21 787 aa10.59□□□□□ -0.71
LINC01550-206ENST00000556462 HDAC3O15379 428 aa10.59□□□□□ -0.71
LINC01550-206ENST00000556462 JUNP05412 331 aaKnown RBP10.59□□□□□ -0.71
LINC01550-206ENST00000556462 FGF4P08620 206 aa10.59□□□□□ -0.71
LINC01550-206ENST00000556462 HOXC4P09017 264 aaPredicted RBP10.59□□□□□ -0.71
LINC01550-206ENST00000556462 HK2P52789 917 aa10.59□□□□□ -0.71
LINC01550-206ENST00000556462 NAA20P61599 178 aa10.59□□□□□ -0.71
LINC01550-206ENST00000556462 TUBB3Q13509 450 aa10.59□□□□□ -0.71
LINC01550-206ENST00000556462 PLA2G4EQ3MJ16 856 aa10.59□□□□□ -0.71
LINC01550-206ENST00000556462 FAM219BQ5XKK7 198 aa10.59□□□□□ -0.71
LINC01550-206ENST00000556462 EPGNQ6UW88 154 aa10.59□□□□□ -0.71
LINC01550-206ENST00000556462 AMZ2Q86W34 360 aa10.59□□□□□ -0.71
LINC01550-206ENST00000556462 SPEM1Q8N4L4 309 aa10.59□□□□□ -0.71
LINC01550-206ENST00000556462 OXR1Q8N573 874 aa10.59□□□□□ -0.71
LINC01550-206ENST00000556462 RLN3Q8WXF3 142 aa10.59□□□□□ -0.71
LINC01550-206ENST00000556462 SCARF2Q96GP6 870 aaPredicted RBP10.59□□□□□ -0.71
LINC01550-206ENST00000556462 ASB2Q96Q27 587 aa10.59□□□□□ -0.71
LINC01550-206ENST00000556462 EGFL8Q99944 293 aa10.59□□□□□ -0.71
LINC01550-206ENST00000556462 TPSD1Q9BZJ3 242 aa10.59□□□□□ -0.71
LINC01550-206ENST00000556462 DPEP2Q9H4A9 486 aa10.59□□□□□ -0.71
LINC01550-206ENST00000556462 SEMA4BQ9NPR2 832 aaPredicted RBP10.59□□□□□ -0.71
LINC01550-206ENST00000556462 ARL15Q9NXU5 204 aa10.59□□□□□ -0.71
LINC01550-206ENST00000556462 HEY2Q9UBP5 337 aa10.59□□□□□ -0.71
LINC01550-206ENST00000556462 ZNHIT2Q9UHR6 403 aa10.59□□□□□ -0.71
LINC01550-206ENST00000556462 EIF2B4Q9UI10 523 aaKnown RBP10.59□□□□□ -0.71
LINC01550-206ENST00000556462 ZNF225Q9UK10 706 aa10.59□□□□□ -0.71
LINC01550-206ENST00000556462 KRT87PA6NCN2 255 aa10.58□□□□□ -0.72
LINC01550-206ENST00000556462 ARHGEF33A8MVX0 844 aa10.58□□□□□ -0.72
LINC01550-206ENST00000556462 SLCO1B7G3V0H7 640 aa10.58□□□□□ -0.72
LINC01550-206ENST00000556462 STK25O00506 426 aa10.58□□□□□ -0.72
LINC01550-206ENST00000556462 FPGTO14772 594 aa10.58□□□□□ -0.72
LINC01550-206ENST00000556462 HGSO14964 777 aaPredicted RBP10.58□□□□□ -0.72
LINC01550-206ENST00000556462 KMOO15229 486 aa10.58□□□□□ -0.72
LINC01550-206ENST00000556462 ZNF217O75362 1048 aa10.58□□□□□ -0.72
LINC01550-206ENST00000556462 ANXA5P08758 320 aa10.58□□□□□ -0.72
LINC01550-206ENST00000556462 CYP2A7P20853 494 aa10.58□□□□□ -0.72
LINC01550-206ENST00000556462 ACADLP28330 430 aa10.58□□□□□ -0.72
LINC01550-206ENST00000556462 SERPINB3P29508 390 aa10.58□□□□□ -0.72
LINC01550-206ENST00000556462 PRDX3P30048 256 aaKnown RBP10.58□□□□□ -0.72
LINC01550-206ENST00000556462 CD6P30203 668 aa10.58□□□□□ -0.72
LINC01550-206ENST00000556462 OXTRP30559 389 aa10.58□□□□□ -0.72
LINC01550-206ENST00000556462 GGT5P36269 586 aa10.58□□□□□ -0.72
LINC01550-206ENST00000556462 GDF5P43026 501 aa10.58□□□□□ -0.72
LINC01550-206ENST00000556462 RPS9P46781 194 aaKnown RBP10.58□□□□□ -0.72
LINC01550-206ENST00000556462 HSPA7P48741 367 aa10.58□□□□□ -0.72
LINC01550-206ENST00000556462 CCR5P51681 352 aa10.58□□□□□ -0.72
LINC01550-206ENST00000556462 HNRNPH2P55795 449 aaKnown RBP10.58□□□□□ -0.72
LINC01550-206ENST00000556462 PFN3P60673 137 aa10.58□□□□□ -0.72
LINC01550-206ENST00000556462 PLOD1Q02809 727 aaPredicted RBP10.58□□□□□ -0.72
LINC01550-206ENST00000556462 LCP2Q13094 533 aa10.58□□□□□ -0.72
LINC01550-206ENST00000556462 UGT3A2Q3SY77 523 aa10.58□□□□□ -0.72
LINC01550-206ENST00000556462 SLC9B1Q4ZJI4 515 aa10.58□□□□□ -0.72
LINC01550-206ENST00000556462 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.58□□□□□ -0.72
LINC01550-206ENST00000556462 METRNLQ641Q3 311 aa10.58□□□□□ -0.72
LINC01550-206ENST00000556462 MTDHQ86UE4 582 aaKnown RBP10.58□□□□□ -0.72
LINC01550-206ENST00000556462 FAM160A2Q8N612 972 aaPredicted RBP10.58□□□□□ -0.72
LINC01550-206ENST00000556462 TMEM145Q8NBT3 493 aa10.58□□□□□ -0.72
LINC01550-206ENST00000556462 CFAP61Q8NHU2 1237 aa10.58□□□□□ -0.72
LINC01550-206ENST00000556462 MCOLN3Q8TDD5 553 aa10.58□□□□□ -0.72
LINC01550-206ENST00000556462 AGAP11Q8TF27 550 aa10.58□□□□□ -0.72
LINC01550-206ENST00000556462 SKA1Q96BD8 255 aa10.58□□□□□ -0.72
LINC01550-206ENST00000556462 HGH1Q9BTY7 390 aa10.58□□□□□ -0.72
LINC01550-206ENST00000556462 TRIM54Q9BYV2 358 aa10.58□□□□□ -0.72
LINC01550-206ENST00000556462 CD244Q9BZW8 370 aa10.58□□□□□ -0.72
LINC01550-206ENST00000556462 WWP1Q9H0M0 922 aa10.58□□□□□ -0.72
LINC01550-206ENST00000556462 OR52A5Q9H2C5 316 aa10.58□□□□□ -0.72
LINC01550-206ENST00000556462 STN1Q9H668 368 aaKnown RBP10.58□□□□□ -0.72
LINC01550-206ENST00000556462 MRPL40Q9NQ50 206 aaKnown RBP10.58□□□□□ -0.72
LINC01550-206ENST00000556462 DNAJC28Q9NX36 388 aa10.58□□□□□ -0.72
LINC01550-206ENST00000556462 VTI1BQ9UEU0 232 aa10.58□□□□□ -0.72
LINC01550-206ENST00000556462 TRAF6Q9Y4K3 522 aa10.58□□□□□ -0.72
LINC01550-206ENST00000556462 IGHV1OR15-9A0A0B4J2B8 117 aa10.57□□□□□ -0.72
LINC01550-206ENST00000556462 CACNB4O00305 520 aaPredicted RBP10.57□□□□□ -0.72
LINC01550-206ENST00000556462 DCTN3O75935 186 aa10.57□□□□□ -0.72
LINC01550-206ENST00000556462 S100BP04271 92 aaPredicted RBP10.57□□□□□ -0.72
LINC01550-206ENST00000556462 HIST1H2AGP0C0S8 130 aaPredicted RBP10.57□□□□□ -0.72
LINC01550-206ENST00000556462 HIST1H2ADP20671 130 aa10.57□□□□□ -0.72
LINC01550-206ENST00000556462 PXNP49023 591 aaPredicted RBP10.57□□□□□ -0.72
LINC01550-206ENST00000556462 FOXA1P55317 472 aa10.57□□□□□ -0.72
LINC01550-206ENST00000556462 AP1S2P56377 157 aa10.57□□□□□ -0.72
LINC01550-206ENST00000556462 MTAPQ13126 283 aa10.57□□□□□ -0.72
LINC01550-206ENST00000556462 RPA4Q13156 261 aa10.57□□□□□ -0.72
LINC01550-206ENST00000556462 CCSMST1Q4G0I0 132 aa10.57□□□□□ -0.72
LINC01550-206ENST00000556462 PYCR3Q53H96 274 aa10.57□□□□□ -0.72
LINC01550-206ENST00000556462 TPRG1LQ5T0D9 272 aa10.57□□□□□ -0.72
LINC01550-206ENST00000556462 KIAA0895LQ68EN5 471 aa10.57□□□□□ -0.72
LINC01550-206ENST00000556462 GCNT7Q6ZNI0 430 aa10.57□□□□□ -0.72
LINC01550-206ENST00000556462 ALYREFQ86V81 257 aaKnown RBP10.57□□□□□ -0.72
LINC01550-206ENST00000556462 CLYBLQ8N0X4 340 aa10.57□□□□□ -0.72
LINC01550-206ENST00000556462 GJD3Q8N144 294 aa10.57□□□□□ -0.72
LINC01550-206ENST00000556462 SPDYE1Q8NFV5 336 aaPredicted RBP10.57□□□□□ -0.72
LINC01550-206ENST00000556462 UBTD2Q8WUN7 234 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms