RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 OLFML1Q6UWY5 402 aa4.79□□□□□ -1.64
ATXN3-239ENST00000556315 KRBA2Q6ZNG9 492 aa4.79□□□□□ -1.64
ATXN3-239ENST00000556315 ENOSF1Q7L5Y1 443 aa4.79□□□□□ -1.64
ATXN3-239ENST00000556315 HPS6Q86YV9 775 aa4.79□□□□□ -1.64
ATXN3-239ENST00000556315 ARHGEF19Q8IW93 802 aa4.79□□□□□ -1.64
ATXN3-239ENST00000556315 NAGSQ8N159 534 aa4.79□□□□□ -1.64
ATXN3-239ENST00000556315 C1orf131Q8NDD1 294 aaKnown RBP4.79□□□□□ -1.64
ATXN3-239ENST00000556315 THAP4Q8WY91 577 aa4.79□□□□□ -1.64
ATXN3-239ENST00000556315 CCDC34Q96HJ3 373 aa4.79□□□□□ -1.64
ATXN3-239ENST00000556315 HIST1H2AHQ96KK5 128 aa4.79□□□□□ -1.64
ATXN3-239ENST00000556315 FAM81BQ96LP2 452 aa4.79□□□□□ -1.64
ATXN3-239ENST00000556315 TBCBQ99426 244 aa4.79□□□□□ -1.64
ATXN3-239ENST00000556315 HIST1H2AJQ99878 128 aa4.79□□□□□ -1.64
ATXN3-239ENST00000556315 SLC25A23Q9BV35 468 aa4.79□□□□□ -1.64
ATXN3-239ENST00000556315 TRIM8Q9BZR9 551 aa4.79□□□□□ -1.64
ATXN3-239ENST00000556315 TWSG1Q9GZX9 223 aa4.79□□□□□ -1.64
ATXN3-239ENST00000556315 SYNCQ9H7C4 482 aa4.79□□□□□ -1.64
ATXN3-239ENST00000556315 WDR26Q9H7D7 661 aa4.79□□□□□ -1.64
ATXN3-239ENST00000556315 APMAPQ9HDC9 416 aa4.79□□□□□ -1.64
ATXN3-239ENST00000556315 MLXIPLQ9NP71 852 aa4.79□□□□□ -1.64
ATXN3-239ENST00000556315 UBE2TQ9NPD8 197 aaPredicted RBP4.79□□□□□ -1.64
ATXN3-239ENST00000556315 SLAMF7Q9NQ25 335 aa4.79□□□□□ -1.64
ATXN3-239ENST00000556315 RMND1Q9NWS8 449 aa4.79□□□□□ -1.64
ATXN3-239ENST00000556315 KCTD5Q9NXV2 234 aa4.79□□□□□ -1.64
ATXN3-239ENST00000556315 TMEM9Q9P0T7 183 aa4.79□□□□□ -1.64
ATXN3-239ENST00000556315 SAE1Q9UBE0 346 aaPredicted RBP4.79□□□□□ -1.64
ATXN3-239ENST00000556315 DNAI1Q9UI46 699 aa4.79□□□□□ -1.64
ATXN3-239ENST00000556315 PADI1Q9ULC6 663 aa4.79□□□□□ -1.64
ATXN3-239ENST00000556315 ENTPD4Q9Y227 616 aa4.79□□□□□ -1.64
ATXN3-239ENST00000556315 PCDHGA9Q9Y5G4 932 aaKnown RBP4.79□□□□□ -1.64
ATXN3-239ENST00000556315 MRPS18BQ9Y676 258 aaKnown RBP4.79□□□□□ -1.64
ATXN3-239ENST00000556315 SPTBN1Q01082 2364 aaKnown RBP4.79□□□□□ -1.64
ATXN3-239ENST00000556315 TDRD6O60522 2096 aaKnown RBP4.78□□□□□ -1.64
ATXN3-239ENST00000556315 A0A0A6YYJ9 748 aa4.78□□□□□ -1.64
ATXN3-239ENST00000556315 CYR61O00622 381 aa4.78□□□□□ -1.64
ATXN3-239ENST00000556315 INSIG1O15503 277 aa4.78□□□□□ -1.64
ATXN3-239ENST00000556315 DPM1O60762 260 aa4.78□□□□□ -1.64
ATXN3-239ENST00000556315 CBX6O95503 412 aa4.78□□□□□ -1.64
ATXN3-239ENST00000556315 MT-ND3P03897 115 aa4.78□□□□□ -1.64
ATXN3-239ENST00000556315 MTHFD2P13995 350 aa4.78□□□□□ -1.64
ATXN3-239ENST00000556315 ENPP1P22413 925 aa4.78□□□□□ -1.64
ATXN3-239ENST00000556315 AK4P27144 223 aaPredicted RBP4.78□□□□□ -1.64
ATXN3-239ENST00000556315 KRT9P35527 623 aa4.78□□□□□ -1.64
ATXN3-239ENST00000556315 DEKP35659 375 aaKnown RBP4.78□□□□□ -1.64
ATXN3-239ENST00000556315 MMP12P39900 470 aa4.78□□□□□ -1.64
ATXN3-239ENST00000556315 USP8P40818 1118 aa4.78□□□□□ -1.64
ATXN3-239ENST00000556315 GDF5P43026 501 aa4.78□□□□□ -1.64
ATXN3-239ENST00000556315 ETV4P43268 484 aa4.78□□□□□ -1.64
ATXN3-239ENST00000556315 GNPDA1P46926 289 aa4.78□□□□□ -1.64
ATXN3-239ENST00000556315 FASLGP48023 281 aa4.78□□□□□ -1.64
ATXN3-239ENST00000556315 CCL11P51671 97 aa4.78□□□□□ -1.64
ATXN3-239ENST00000556315 NDUFA8P51970 172 aa4.78□□□□□ -1.64
ATXN3-239ENST00000556315 POLR2LP62875 67 aaKnown RBP4.78□□□□□ -1.64
ATXN3-239ENST00000556315 IL11RAQ14626 422 aa4.78□□□□□ -1.64
ATXN3-239ENST00000556315 CYTH1Q15438 398 aa4.78□□□□□ -1.64
ATXN3-239ENST00000556315 CCDC40Q4G0X9 1142 aa4.78□□□□□ -1.64
ATXN3-239ENST00000556315 ZRANB3Q5FWF4 1079 aa4.78□□□□□ -1.64
ATXN3-239ENST00000556315 SP5Q6BEB4 398 aaPredicted RBP4.78□□□□□ -1.64
ATXN3-239ENST00000556315 RWDD4Q6NW29 188 aaKnown RBP4.78□□□□□ -1.64
ATXN3-239ENST00000556315 LEKR1Q6ZMV7 388 aa4.78□□□□□ -1.64
ATXN3-239ENST00000556315 SLC47A2Q86VL8 602 aa4.78□□□□□ -1.64
ATXN3-239ENST00000556315 NLRP14Q86W24 1093 aa4.78□□□□□ -1.64
ATXN3-239ENST00000556315 ZNF354CQ86Y25 554 aa4.78□□□□□ -1.64
ATXN3-239ENST00000556315 DNAAF5Q86Y56 855 aa4.78□□□□□ -1.64
ATXN3-239ENST00000556315 KLHL36Q8N4N3 616 aa4.78□□□□□ -1.64
ATXN3-239ENST00000556315 CDYL2Q8N8U2 506 aa4.78□□□□□ -1.64
ATXN3-239ENST00000556315 NUDT10Q8NFP7 164 aa4.78□□□□□ -1.64
ATXN3-239ENST00000556315 OR5AN1Q8NGI8 311 aa4.78□□□□□ -1.64
ATXN3-239ENST00000556315 PDCD6IPQ8WUM4 868 aaKnown RBP4.78□□□□□ -1.64
ATXN3-239ENST00000556315 PATE1Q8WXA2 126 aa4.78□□□□□ -1.64
ATXN3-239ENST00000556315 NCSTNQ92542 709 aa4.78□□□□□ -1.64
ATXN3-239ENST00000556315 SH3KBP1Q96B97 665 aa4.78□□□□□ -1.64
ATXN3-239ENST00000556315 NUDT11Q96G61 164 aa4.78□□□□□ -1.64
ATXN3-239ENST00000556315 AJUBAQ96IF1 538 aa4.78□□□□□ -1.64
ATXN3-239ENST00000556315 RAX2Q96IS3 184 aa4.78□□□□□ -1.64
ATXN3-239ENST00000556315 WWC2-AS2Q96NR7 200 aa4.78□□□□□ -1.64
ATXN3-239ENST00000556315 NCAPGQ9BPX3 1015 aa4.78□□□□□ -1.64
ATXN3-239ENST00000556315 TEX101Q9BY14 249 aa4.78□□□□□ -1.64
ATXN3-239ENST00000556315 ACP6Q9NPH0 428 aa4.78□□□□□ -1.64
ATXN3-239ENST00000556315 PHPT1Q9NRX4 125 aaPredicted RBP4.78□□□□□ -1.64
ATXN3-239ENST00000556315 TMEM248Q9NWD8 314 aa4.78□□□□□ -1.64
ATXN3-239ENST00000556315 OR12D3Q9UGF7 316 aa4.78□□□□□ -1.64
ATXN3-239ENST00000556315 PCDHGA6Q9Y5G7 932 aa4.78□□□□□ -1.64
ATXN3-239ENST00000556315 CACNA1DQ01668 2161 aa4.78□□□□□ -1.64
ATXN3-239ENST00000556315 ZFC3H1O60293 1989 aaKnown RBP4.78□□□□□ -1.64
ATXN3-239ENST00000556315 DOPEY1Q5JWR5 2465 aa4.78□□□□□ -1.64
ATXN3-239ENST00000556315 TRPM6Q9BX84 2022 aa4.77□□□□□ -1.65
ATXN3-239ENST00000556315 ARHGAP10A1A4S6 786 aa4.77□□□□□ -1.65
ATXN3-239ENST00000556315 HEATR9A2RTY3 570 aa4.77□□□□□ -1.65
ATXN3-239ENST00000556315 A6NCN8 305 aa4.77□□□□□ -1.65
ATXN3-239ENST00000556315 C21orf140B9A014 251 aa4.77□□□□□ -1.65
ATXN3-239ENST00000556315 NRP2O60462 931 aa4.77□□□□□ -1.65
ATXN3-239ENST00000556315 DNAJB5O75953 348 aa4.77□□□□□ -1.65
ATXN3-239ENST00000556315 ZNF202O95125 648 aa4.77□□□□□ -1.65
ATXN3-239ENST00000556315 PIGNO95427 931 aa4.77□□□□□ -1.65
ATXN3-239ENST00000556315 GNA14O95837 355 aa4.77□□□□□ -1.65
ATXN3-239ENST00000556315 SLPIP03973 132 aa4.77□□□□□ -1.65
ATXN3-239ENST00000556315 IVLP07476 585 aa4.77□□□□□ -1.65
ATXN3-239ENST00000556315 PLEKP08567 350 aaPredicted RBP4.77□□□□□ -1.65
ATXN3-239ENST00000556315 ANKRD34CP0C6C1 535 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms