RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 HIST3H2AQ7L7L0 130 aa2.84□□□□□ -1.95
SCFD1-218ENST00000556256 PIWIL4Q7Z3Z4 852 aaKnown RBP2.84□□□□□ -1.95
SCFD1-218ENST00000556256 ADGRA1Q86SQ6 560 aa2.84□□□□□ -1.95
SCFD1-218ENST00000556256 SDCCAG8Q86SQ7 713 aaPredicted RBP2.84□□□□□ -1.95
SCFD1-218ENST00000556256 PRPF39Q86UA1 669 aaKnown RBP2.84□□□□□ -1.95
SCFD1-218ENST00000556256 LRRTM1Q86UE6 522 aa2.84□□□□□ -1.95
SCFD1-218ENST00000556256 LINC00346Q8IVM7 164 aa2.84□□□□□ -1.95
SCFD1-218ENST00000556256 MCEMP1Q8IX19 187 aa2.84□□□□□ -1.95
SCFD1-218ENST00000556256 TEX11Q8IYF3 940 aa2.84□□□□□ -1.95
SCFD1-218ENST00000556256 SCML4Q8N228 414 aa2.84□□□□□ -1.95
SCFD1-218ENST00000556256 C17orf53Q8N3J3 647 aaPredicted RBP2.84□□□□□ -1.95
SCFD1-218ENST00000556256 LSMEM1Q8N8F7 131 aa2.84□□□□□ -1.95
SCFD1-218ENST00000556256 POC5Q8NA72 575 aa2.84□□□□□ -1.95
SCFD1-218ENST00000556256 CSNK2A3Q8NEV1 391 aa2.84□□□□□ -1.95
SCFD1-218ENST00000556256 OR8K5Q8NH50 307 aa2.84□□□□□ -1.95
SCFD1-218ENST00000556256 SLC22A18Q96BI1 424 aa2.84□□□□□ -1.95
SCFD1-218ENST00000556256 CEP295NLQ96MC4 621 aa2.84□□□□□ -1.95
SCFD1-218ENST00000556256 DACH2Q96NX9 599 aa2.84□□□□□ -1.95
SCFD1-218ENST00000556256 CENPOQ9BU64 300 aa2.84□□□□□ -1.95
SCFD1-218ENST00000556256 FGFBP2Q9BYJ0 223 aa2.84□□□□□ -1.95
SCFD1-218ENST00000556256 EPB41L5Q9HCM4 733 aa2.84□□□□□ -1.95
SCFD1-218ENST00000556256 NKIRAS2Q9NYR9 191 aa2.84□□□□□ -1.95
SCFD1-218ENST00000556256 R3HDM2Q9Y2K5 976 aaKnown RBP2.84□□□□□ -1.95
SCFD1-218ENST00000556256 COL4A4P53420 1690 aaPredicted RBP2.84□□□□□ -1.95
SCFD1-218ENST00000556256 ZNF644Q9H582 1327 aaPredicted RBP2.84□□□□□ -1.96
SCFD1-218ENST00000556256 TMEM8BA6NDV4 472 aa2.83□□□□□ -1.96
SCFD1-218ENST00000556256 GLOD5A6NK44 160 aa2.83□□□□□ -1.96
SCFD1-218ENST00000556256 PRR32B1ATL7 298 aa2.83□□□□□ -1.96
SCFD1-218ENST00000556256 B4DLN1 442 aa2.83□□□□□ -1.96
SCFD1-218ENST00000556256 FAM90A26D6RGX4 464 aa2.83□□□□□ -1.96
SCFD1-218ENST00000556256 TMEM178BH3BS89 294 aa2.83□□□□□ -1.96
SCFD1-218ENST00000556256 ADAMDEC1O15204 470 aa2.83□□□□□ -1.96
SCFD1-218ENST00000556256 SPINT2O43291 252 aa2.83□□□□□ -1.96
SCFD1-218ENST00000556256 FIBPO43427 364 aa2.83□□□□□ -1.96
SCFD1-218ENST00000556256 ADAM20O43506 726 aa2.83□□□□□ -1.96
SCFD1-218ENST00000556256 CSPG5O95196 566 aa2.83□□□□□ -1.96
SCFD1-218ENST00000556256 STARD3NLO95772 234 aa2.83□□□□□ -1.96
SCFD1-218ENST00000556256 DUX4L4P0CJ87 422 aa2.83□□□□□ -1.96
SCFD1-218ENST00000556256 IGHV4-38-2P0DP08 117 aa2.83□□□□□ -1.96
SCFD1-218ENST00000556256 TRIM21P19474 475 aaKnown RBP2.83□□□□□ -1.96
SCFD1-218ENST00000556256 UGT1A1P22309 533 aa2.83□□□□□ -1.96
SCFD1-218ENST00000556256 CEACAM8P31997 349 aaPredicted RBP2.83□□□□□ -1.96
SCFD1-218ENST00000556256 EIF2DP41214 584 aaKnown RBP2.83□□□□□ -1.96
SCFD1-218ENST00000556256 NRIP1P48552 1158 aa2.83□□□□□ -1.96
SCFD1-218ENST00000556256 SUOXP51687 545 aa2.83□□□□□ -1.96
SCFD1-218ENST00000556256 MRPL12P52815 198 aaKnown RBP2.83□□□□□ -1.96
SCFD1-218ENST00000556256 TAS2R38P59533 333 aa2.83□□□□□ -1.96
SCFD1-218ENST00000556256 PLIN5Q00G26 463 aa2.83□□□□□ -1.96
SCFD1-218ENST00000556256 LRMPQ12912 555 aa2.83□□□□□ -1.96
SCFD1-218ENST00000556256 RAB6CQ53S08 254 aa2.83□□□□□ -1.96
SCFD1-218ENST00000556256 DCST1Q5T197 706 aa2.83□□□□□ -1.96
SCFD1-218ENST00000556256 KRT79Q5XKE5 535 aa2.83□□□□□ -1.96
SCFD1-218ENST00000556256 NSUN5P2Q63ZY6 315 aa2.83□□□□□ -1.96
SCFD1-218ENST00000556256 PAPD4Q6PIY7 484 aaKnown RBP2.83□□□□□ -1.96
SCFD1-218ENST00000556256 MFSD6Q6ZSS7 791 aa2.83□□□□□ -1.96
SCFD1-218ENST00000556256 KBTBD6Q86V97 674 aa2.83□□□□□ -1.96
SCFD1-218ENST00000556256 TAGAPQ8N103 731 aa2.83□□□□□ -1.96
SCFD1-218ENST00000556256 SLC38A9Q8NBW4 561 aa2.83□□□□□ -1.96
SCFD1-218ENST00000556256 C1orf131Q8NDD1 294 aaKnown RBP2.83□□□□□ -1.96
SCFD1-218ENST00000556256 RBM15BQ8NDT2 890 aaKnown RBP2.83□□□□□ -1.96
SCFD1-218ENST00000556256 ACVR1CQ8NER5 493 aa2.83□□□□□ -1.96
SCFD1-218ENST00000556256 OR1J2Q8NGS2 313 aa2.83□□□□□ -1.96
SCFD1-218ENST00000556256 HM13Q8TCT9 377 aa2.83□□□□□ -1.96
SCFD1-218ENST00000556256 MRGPRDQ8TDS7 321 aa2.83□□□□□ -1.96
SCFD1-218ENST00000556256 ORAI1Q96D31 301 aa2.83□□□□□ -1.96
SCFD1-218ENST00000556256 ERP27Q96DN0 273 aa2.83□□□□□ -1.96
SCFD1-218ENST00000556256 GAD1Q99259 594 aa2.83□□□□□ -1.96
SCFD1-218ENST00000556256 GFI1Q99684 422 aa2.83□□□□□ -1.96
SCFD1-218ENST00000556256 PSD2Q9BQI7 771 aa2.83□□□□□ -1.96
SCFD1-218ENST00000556256 TEX12Q9BXU0 123 aa2.83□□□□□ -1.96
SCFD1-218ENST00000556256 RAB6CQ9H0N0 254 aa2.83□□□□□ -1.96
SCFD1-218ENST00000556256 SIL1Q9H173 461 aa2.83□□□□□ -1.96
SCFD1-218ENST00000556256 HRH4Q9H3N8 390 aa2.83□□□□□ -1.96
SCFD1-218ENST00000556256 ZBTB20Q9HC78 741 aaPredicted RBP2.83□□□□□ -1.96
SCFD1-218ENST00000556256 TCP11L1Q9NUJ3 509 aa2.83□□□□□ -1.96
SCFD1-218ENST00000556256 PLCXD1Q9NUJ7 323 aa2.83□□□□□ -1.96
SCFD1-218ENST00000556256 GIMAP4Q9NUV9 329 aa2.83□□□□□ -1.96
SCFD1-218ENST00000556256 TRMT1Q9NXH9 659 aaKnown RBP2.83□□□□□ -1.96
SCFD1-218ENST00000556256 TDRD15B5MCY1 1934 aaKnown RBP2.82□□□□□ -1.96
SCFD1-218ENST00000556256 IGLV7-46A0A075B6I9 117 aa2.82□□□□□ -1.96
SCFD1-218ENST00000556256 A0A1W2PP11 408 aa2.82□□□□□ -1.96
SCFD1-218ENST00000556256 LNP1A1A4G5 178 aa2.82□□□□□ -1.96
SCFD1-218ENST00000556256 C5orf60A6NFR6 353 aa2.82□□□□□ -1.96
SCFD1-218ENST00000556256 H3BQ06 376 aaPredicted RBP2.82□□□□□ -1.96
SCFD1-218ENST00000556256 CTDSP2O14595 271 aa2.82□□□□□ -1.96
SCFD1-218ENST00000556256 SLC22A2O15244 555 aa2.82□□□□□ -1.96
SCFD1-218ENST00000556256 KCNN4O15554 427 aa2.82□□□□□ -1.96
SCFD1-218ENST00000556256 MMP9P14780 707 aa2.82□□□□□ -1.96
SCFD1-218ENST00000556256 PRLRP16471 622 aa2.82□□□□□ -1.96
SCFD1-218ENST00000556256 NNMTP40261 264 aa2.82□□□□□ -1.96
SCFD1-218ENST00000556256 MSH2P43246 934 aa2.82□□□□□ -1.96
SCFD1-218ENST00000556256 NUCB1Q02818 461 aa2.82□□□□□ -1.96
SCFD1-218ENST00000556256 FOXM1Q08050 763 aa2.82□□□□□ -1.96
SCFD1-218ENST00000556256 MAD2L1Q13257 205 aaPredicted RBP2.82□□□□□ -1.96
SCFD1-218ENST00000556256 BAATQ14032 418 aaPredicted RBP2.82□□□□□ -1.96
SCFD1-218ENST00000556256 MVPQ14764 893 aaKnown RBP2.82□□□□□ -1.96
SCFD1-218ENST00000556256 NTRK2Q16620 822 aa2.82□□□□□ -1.96
SCFD1-218ENST00000556256 MYLK3Q32MK0 819 aa2.82□□□□□ -1.96
SCFD1-218ENST00000556256 GARNL3Q5VVW2 1013 aa2.82□□□□□ -1.96
SCFD1-218ENST00000556256 C18orf63Q68DL7 685 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms