RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 POLR2CP19387 275 aaPredicted RBP13.3□□□□□ -0.28
SNX6-203ENST00000555416 CD151P48509 253 aa13.3□□□□□ -0.28
SNX6-203ENST00000555416 TTPAP49638 278 aa13.3□□□□□ -0.28
SNX6-203ENST00000555416 KPNA2P52292 529 aaKnown RBP13.3□□□□□ -0.28
SNX6-203ENST00000555416 CXADRP78310 365 aa13.3□□□□□ -0.28
SNX6-203ENST00000555416 MRPS25P82663 173 aaKnown RBP13.3□□□□□ -0.28
SNX6-203ENST00000555416 SARNPP82979 210 aaKnown RBP13.3□□□□□ -0.28
SNX6-203ENST00000555416 KRT33BQ14525 404 aa13.3□□□□□ -0.28
SNX6-203ENST00000555416 KCNAB1Q14722 419 aa13.3□□□□□ -0.28
SNX6-203ENST00000555416 TYSND1Q2T9J0 566 aa13.3□□□□□ -0.28
SNX6-203ENST00000555416 KIAA0930Q6ICG6 404 aaPredicted RBP13.3□□□□□ -0.28
SNX6-203ENST00000555416 CENPUQ71F23 418 aa13.3□□□□□ -0.28
SNX6-203ENST00000555416 IGDCC3Q8IVU1 814 aa13.3□□□□□ -0.28
SNX6-203ENST00000555416 UNC5BQ8IZJ1 945 aa13.3□□□□□ -0.28
SNX6-203ENST00000555416 LMNTD1Q8N9Z9 388 aa13.3□□□□□ -0.28
SNX6-203ENST00000555416 ACVR1CQ8NER5 493 aa13.3□□□□□ -0.28
SNX6-203ENST00000555416 OR52E1Q8NGJ3 308 aa13.3□□□□□ -0.28
SNX6-203ENST00000555416 ZFPM2Q8WW38 1151 aa13.3□□□□□ -0.28
SNX6-203ENST00000555416 ZNF669Q96BR6 464 aaPredicted RBP13.3□□□□□ -0.28
SNX6-203ENST00000555416 BIRC8Q96P09 236 aa13.3□□□□□ -0.28
SNX6-203ENST00000555416 DDA1Q9BW61 102 aa13.3□□□□□ -0.28
SNX6-203ENST00000555416 ZNF768Q9H5H4 540 aaKnown RBP13.3□□□□□ -0.28
SNX6-203ENST00000555416 XAB2Q9HCS7 855 aaKnown RBP13.3□□□□□ -0.28
SNX6-203ENST00000555416 FBXO8Q9NRD0 319 aa13.3□□□□□ -0.28
SNX6-203ENST00000555416 WDR70Q9NW82 654 aa13.3□□□□□ -0.28
SNX6-203ENST00000555416 HRASLS2Q9NWW9 162 aa13.3□□□□□ -0.28
SNX6-203ENST00000555416 SEMA5BQ9P283 1151 aa13.3□□□□□ -0.28
SNX6-203ENST00000555416 GALPQ9UBC7 116 aa13.3□□□□□ -0.28
SNX6-203ENST00000555416 ASIC3Q9UHC3 531 aa13.3□□□□□ -0.28
SNX6-203ENST00000555416 ANAPC5Q9UJX4 755 aa13.3□□□□□ -0.28
SNX6-203ENST00000555416 HEBP2Q9Y5Z4 205 aa13.3□□□□□ -0.28
SNX6-203ENST00000555416 COLEC10Q9Y6Z7 277 aa13.3□□□□□ -0.28
SNX6-203ENST00000555416 TEX51A0A1B0GUA7 166 aa13.29□□□□□ -0.28
SNX6-203ENST00000555416 QSOX1O00391 747 aa13.29□□□□□ -0.28
SNX6-203ENST00000555416 IFRD1O00458 451 aaPredicted RBP13.29□□□□□ -0.28
SNX6-203ENST00000555416 TP73O15350 636 aa13.29□□□□□ -0.28
SNX6-203ENST00000555416 GPC4O75487 556 aa13.29□□□□□ -0.28
SNX6-203ENST00000555416 GSTM1P09488 218 aa13.29□□□□□ -0.28
SNX6-203ENST00000555416 LIPCP11150 499 aa13.29□□□□□ -0.28
SNX6-203ENST00000555416 FOLR1P15328 257 aa13.29□□□□□ -0.28
SNX6-203ENST00000555416 ZNF28P17035 718 aa13.29□□□□□ -0.28
SNX6-203ENST00000555416 AOAHP28039 575 aa13.29□□□□□ -0.28
SNX6-203ENST00000555416 NDUFS1P28331 727 aa13.29□□□□□ -0.28
SNX6-203ENST00000555416 FMO4P31512 558 aa13.29□□□□□ -0.28
SNX6-203ENST00000555416 EIF3BP55884 814 aaKnown RBP13.29□□□□□ -0.28
SNX6-203ENST00000555416 GSTM4Q03013 218 aa13.29□□□□□ -0.28
SNX6-203ENST00000555416 DHX34Q14147 1143 aaKnown RBP13.29□□□□□ -0.28
SNX6-203ENST00000555416 AARS2Q5JTZ9 985 aaKnown RBP13.29□□□□□ -0.28
SNX6-203ENST00000555416 ARHGAP40Q5TG30 622 aa13.29□□□□□ -0.28
SNX6-203ENST00000555416 IZUMO3Q5VZ72 239 aa13.29□□□□□ -0.28
SNX6-203ENST00000555416 TIPARPQ7Z3E1 657 aaKnown RBP13.29□□□□□ -0.28
SNX6-203ENST00000555416 TMEM135Q86UB9 458 aa13.29□□□□□ -0.28
SNX6-203ENST00000555416 DENND6AQ8IWF6 608 aa13.29□□□□□ -0.28
SNX6-203ENST00000555416 OTUD6BQ8N6M0 293 aa13.29□□□□□ -0.28
SNX6-203ENST00000555416 LCN9Q8WX39 176 aa13.29□□□□□ -0.28
SNX6-203ENST00000555416 LPGAT1Q92604 370 aa13.29□□□□□ -0.28
SNX6-203ENST00000555416 FAM136AQ96C01 138 aa13.29□□□□□ -0.28
SNX6-203ENST00000555416 ZDHHC12Q96GR4 267 aa13.29□□□□□ -0.28
SNX6-203ENST00000555416 ELMO2Q96JJ3 720 aa13.29□□□□□ -0.28
SNX6-203ENST00000555416 BBC3Q96PG8 261 aaPredicted RBP13.29□□□□□ -0.28
SNX6-203ENST00000555416 TTC1Q99614 292 aa13.29□□□□□ -0.28
SNX6-203ENST00000555416 CARD6Q9BX69 1037 aa13.29□□□□□ -0.28
SNX6-203ENST00000555416 B3GNT4Q9C0J1 378 aa13.29□□□□□ -0.28
SNX6-203ENST00000555416 MVB12BQ9H7P6 319 aa13.29□□□□□ -0.28
SNX6-203ENST00000555416 PLAC1Q9HBJ0 212 aa13.29□□□□□ -0.28
SNX6-203ENST00000555416 CIDEBQ9UHD4 219 aa13.29□□□□□ -0.28
SNX6-203ENST00000555416 PLAGL1Q9UM63 463 aa13.29□□□□□ -0.28
SNX6-203ENST00000555416 ICKQ9UPZ9 632 aa13.29□□□□□ -0.28
SNX6-203ENST00000555416 ASF1AQ9Y294 204 aa13.29□□□□□ -0.28
SNX6-203ENST00000555416 MAD1L1Q9Y6D9 718 aa13.29□□□□□ -0.28
SNX6-203ENST00000555416 UBA6A0AVT1 1052 aaPredicted RBP13.28□□□□□ -0.28
SNX6-203ENST00000555416 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.28□□□□□ -0.28
SNX6-203ENST00000555416 BTN3A1O00481 513 aa13.28□□□□□ -0.28
SNX6-203ENST00000555416 TOX3O15405 576 aaPredicted RBP13.28□□□□□ -0.28
SNX6-203ENST00000555416 TTI1O43156 1089 aa13.28□□□□□ -0.28
SNX6-203ENST00000555416 NIPSNAP2O75323 286 aa13.28□□□□□ -0.28
SNX6-203ENST00000555416 NDUFS3O75489 264 aa13.28□□□□□ -0.28
SNX6-203ENST00000555416 TIAF1O95411 115 aa13.28□□□□□ -0.28
SNX6-203ENST00000555416 S1PR4O95977 384 aa13.28□□□□□ -0.28
SNX6-203ENST00000555416 NELFEP18615 380 aaKnown RBP13.28□□□□□ -0.28
SNX6-203ENST00000555416 RPS3P23396 243 aaKnown RBP eCLIP13.28□□□□□ -0.28
SNX6-203ENST00000555416 FOXM1Q08050 763 aa13.28□□□□□ -0.28
SNX6-203ENST00000555416 HSPA14Q0VDF9 509 aa13.28□□□□□ -0.28
SNX6-203ENST00000555416 ABRQ12979 859 aa13.28□□□□□ -0.28
SNX6-203ENST00000555416 SYTL3Q4VX76 610 aa13.28□□□□□ -0.28
SNX6-203ENST00000555416 DNTTIP2Q5QJE6 756 aaKnown RBP13.28□□□□□ -0.28
SNX6-203ENST00000555416 DCAF12Q5T6F0 453 aa13.28□□□□□ -0.28
SNX6-203ENST00000555416 TMEM164Q5U3C3 297 aa13.28□□□□□ -0.28
SNX6-203ENST00000555416 PTRHD1Q6GMV3 140 aaKnown RBP13.28□□□□□ -0.28
SNX6-203ENST00000555416 NEPROQ6NW34 567 aa13.28□□□□□ -0.28
SNX6-203ENST00000555416 OOSP2Q86WS3 158 aa13.28□□□□□ -0.28
SNX6-203ENST00000555416 CILP2Q8IUL8 1156 aa13.28□□□□□ -0.28
SNX6-203ENST00000555416 SLC22A15Q8IZD6 547 aa13.28□□□□□ -0.28
SNX6-203ENST00000555416 ADGRF3Q8IZF5 1079 aa13.28□□□□□ -0.28
SNX6-203ENST00000555416 NKD1Q969G9 470 aa13.28□□□□□ -0.28
SNX6-203ENST00000555416 SLC41A2Q96JW4 573 aa13.28□□□□□ -0.28
SNX6-203ENST00000555416 OR6C1Q96RD1 312 aa13.28□□□□□ -0.28
SNX6-203ENST00000555416 WDR83Q9BRX9 315 aaKnown RBP13.28□□□□□ -0.28
SNX6-203ENST00000555416 SRMSQ9H3Y6 488 aa13.28□□□□□ -0.28
SNX6-203ENST00000555416 TFB2MQ9H5Q4 396 aaKnown RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms