RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 VPS37BQ9H9H4 285 aa12.04□□□□□ -0.48
SYNE2-214ENST00000554928 POLR1BQ9H9Y6 1135 aa12.04□□□□□ -0.48
SYNE2-214ENST00000554928 OCIAD1Q9NX40 245 aa12.04□□□□□ -0.48
SYNE2-214ENST00000554928 PDP2Q9P2J9 529 aa12.04□□□□□ -0.48
SYNE2-214ENST00000554928 PISDQ9UG56 409 aa12.04□□□□□ -0.48
SYNE2-214ENST00000554928 CIDEBQ9UHD4 219 aa12.04□□□□□ -0.48
SYNE2-214ENST00000554928 FBXO5Q9UKT4 447 aa12.04□□□□□ -0.48
SYNE2-214ENST00000554928 ZMIZ1Q9ULJ6 1067 aa12.04□□□□□ -0.48
SYNE2-214ENST00000554928 PLAGL1Q9UM63 463 aa12.04□□□□□ -0.48
SYNE2-214ENST00000554928 RAXQ9Y2V3 346 aa12.04□□□□□ -0.48
SYNE2-214ENST00000554928 DMXL2Q8TDJ6 3036 aa12.03□□□□□ -0.48
SYNE2-214ENST00000554928 KLHL33A6NCF5 533 aa12.03□□□□□ -0.48
SYNE2-214ENST00000554928 QSOX1O00391 747 aa12.03□□□□□ -0.48
SYNE2-214ENST00000554928 PLD2O14939 933 aa12.03□□□□□ -0.48
SYNE2-214ENST00000554928 CAPN5O15484 640 aaPredicted RBP12.03□□□□□ -0.48
SYNE2-214ENST00000554928 PIAS1O75925 651 aa12.03□□□□□ -0.48
SYNE2-214ENST00000554928 TNFSF15O95150 251 aa12.03□□□□□ -0.48
SYNE2-214ENST00000554928 AMD1P17707 334 aa12.03□□□□□ -0.48
SYNE2-214ENST00000554928 CAPZBP47756 277 aa12.03□□□□□ -0.48
SYNE2-214ENST00000554928 PLTPP55058 493 aa12.03□□□□□ -0.48
SYNE2-214ENST00000554928 TIAL1Q01085 375 aaKnown RBP eCLIP12.03□□□□□ -0.48
SYNE2-214ENST00000554928 ABRQ12979 859 aa12.03□□□□□ -0.48
SYNE2-214ENST00000554928 RPA4Q13156 261 aa12.03□□□□□ -0.48
SYNE2-214ENST00000554928 PLCL1Q15111 1095 aa12.03□□□□□ -0.48
SYNE2-214ENST00000554928 ST3GAL2Q16842 350 aa12.03□□□□□ -0.48
SYNE2-214ENST00000554928 SYTL3Q4VX76 610 aa12.03□□□□□ -0.48
SYNE2-214ENST00000554928 SPANXN3Q5MJ09 141 aa12.03□□□□□ -0.48
SYNE2-214ENST00000554928 FBXO38Q6PIJ6 1188 aa12.03□□□□□ -0.48
SYNE2-214ENST00000554928 WDR74Q6RFH5 385 aaPredicted RBP12.03□□□□□ -0.48
SYNE2-214ENST00000554928 CAPN12Q6ZSI9 719 aa12.03□□□□□ -0.48
SYNE2-214ENST00000554928 FAM92BQ6ZTR7 304 aa12.03□□□□□ -0.48
SYNE2-214ENST00000554928 ARHGAP22Q7Z5H3 698 aa12.03□□□□□ -0.48
SYNE2-214ENST00000554928 PROSER1Q86XN7 944 aa12.03□□□□□ -0.48
SYNE2-214ENST00000554928 SLC22A15Q8IZD6 547 aa12.03□□□□□ -0.48
SYNE2-214ENST00000554928 FBXO39Q8N4B4 442 aa12.03□□□□□ -0.48
SYNE2-214ENST00000554928 AVL9Q8NBF6 648 aa12.03□□□□□ -0.48
SYNE2-214ENST00000554928 OR52E1Q8NGJ3 308 aa12.03□□□□□ -0.48
SYNE2-214ENST00000554928 WDR36Q8NI36 951 aaKnown RBP12.03□□□□□ -0.48
SYNE2-214ENST00000554928 ART4Q93070 314 aa12.03□□□□□ -0.48
SYNE2-214ENST00000554928 SMYD2Q9NRG4 433 aa12.03□□□□□ -0.48
SYNE2-214ENST00000554928 WHRNQ9P202 907 aa12.03□□□□□ -0.48
SYNE2-214ENST00000554928 ZC3H7BQ9UGR2 993 aaKnown RBP12.03□□□□□ -0.48
SYNE2-214ENST00000554928 DMGDHQ9UI17 866 aaKnown RBP12.03□□□□□ -0.48
SYNE2-214ENST00000554928 GNPTGQ9UJJ9 305 aa12.03□□□□□ -0.48
SYNE2-214ENST00000554928 NFS1Q9Y697 457 aa12.03□□□□□ -0.48
SYNE2-214ENST00000554928 MN1Q10571 1320 aaPredicted RBP12.03□□□□□ -0.48
SYNE2-214ENST00000554928 APC2O95996 2303 aa12.03□□□□□ -0.48
SYNE2-214ENST00000554928 PIKFYVEQ9Y2I7 2098 aa12.02□□□□□ -0.48
SYNE2-214ENST00000554928 OR6C74A6NCV1 312 aa12.02□□□□□ -0.49
SYNE2-214ENST00000554928 IFRD1O00458 451 aaPredicted RBP12.02□□□□□ -0.49
SYNE2-214ENST00000554928 BTN3A3O00478 584 aa12.02□□□□□ -0.49
SYNE2-214ENST00000554928 C9P02748 559 aa12.02□□□□□ -0.49
SYNE2-214ENST00000554928 GSTM1P09488 218 aa12.02□□□□□ -0.49
SYNE2-214ENST00000554928 FGF3P11487 239 aaPredicted RBP12.02□□□□□ -0.49
SYNE2-214ENST00000554928 PKMP14618 531 aaKnown RBP12.02□□□□□ -0.49
SYNE2-214ENST00000554928 PPARGP37231 505 aaPredicted RBP12.02□□□□□ -0.49
SYNE2-214ENST00000554928 CD151P48509 253 aa12.02□□□□□ -0.49
SYNE2-214ENST00000554928 CARSP49589 748 aaKnown RBP12.02□□□□□ -0.49
SYNE2-214ENST00000554928 GSTM4Q03013 218 aa12.02□□□□□ -0.49
SYNE2-214ENST00000554928 CLPPQ16740 277 aaPredicted RBP12.02□□□□□ -0.49
SYNE2-214ENST00000554928 CCSMST1Q4G0I0 132 aa12.02□□□□□ -0.49
SYNE2-214ENST00000554928 ACSBG2Q5FVE4 666 aa12.02□□□□□ -0.49
SYNE2-214ENST00000554928 RBM20Q5T481 1227 aaKnown RBP12.02□□□□□ -0.49
SYNE2-214ENST00000554928 UBAP2Q5T6F2 1119 aaKnown RBP12.02□□□□□ -0.49
SYNE2-214ENST00000554928 TEDDM1Q5T9Z0 273 aa12.02□□□□□ -0.49
SYNE2-214ENST00000554928 IRGCQ6NXR0 463 aa12.02□□□□□ -0.49
SYNE2-214ENST00000554928 LRRC6Q86X45 466 aa12.02□□□□□ -0.49
SYNE2-214ENST00000554928 RBM12BQ8IXT5 1001 aaKnown RBP12.02□□□□□ -0.49
SYNE2-214ENST00000554928 ZBED8Q8IZ13 594 aa12.02□□□□□ -0.49
SYNE2-214ENST00000554928 SIDT2Q8NBJ9 832 aaKnown RBP12.02□□□□□ -0.49
SYNE2-214ENST00000554928 C2CD4AQ8NCU7 369 aaPredicted RBP12.02□□□□□ -0.49
SYNE2-214ENST00000554928 OR4E2Q8NGC2 313 aa12.02□□□□□ -0.49
SYNE2-214ENST00000554928 CFAP61Q8NHU2 1237 aa12.02□□□□□ -0.49
SYNE2-214ENST00000554928 FBXO25Q8TCJ0 367 aa12.02□□□□□ -0.49
SYNE2-214ENST00000554928 TMEM159Q96B96 161 aa12.02□□□□□ -0.49
SYNE2-214ENST00000554928 CERS2Q96G23 380 aa12.02□□□□□ -0.49
SYNE2-214ENST00000554928 C9orf72Q96LT7 481 aa12.02□□□□□ -0.49
SYNE2-214ENST00000554928 SLC46A1Q96NT5 459 aa12.02□□□□□ -0.49
SYNE2-214ENST00000554928 TCF12Q99081 682 aa12.02□□□□□ -0.49
SYNE2-214ENST00000554928 NDNQ99608 321 aa12.02□□□□□ -0.49
SYNE2-214ENST00000554928 STRADBQ9C0K7 418 aa12.02□□□□□ -0.49
SYNE2-214ENST00000554928 SAYSD1Q9NPB0 183 aa12.02□□□□□ -0.49
SYNE2-214ENST00000554928 FOXJ2Q9P0K8 574 aa12.02□□□□□ -0.49
SYNE2-214ENST00000554928 DKK4Q9UBT3 224 aa12.02□□□□□ -0.49
SYNE2-214ENST00000554928 ICKQ9UPZ9 632 aa12.02□□□□□ -0.49
SYNE2-214ENST00000554928 ASF1AQ9Y294 204 aa12.02□□□□□ -0.49
SYNE2-214ENST00000554928 PSAT1Q9Y617 370 aa12.02□□□□□ -0.49
SYNE2-214ENST00000554928 USP24Q9UPU5 2620 aa12.01□□□□□ -0.49
SYNE2-214ENST00000554928 OR5K3A6NET4 321 aa12.01□□□□□ -0.49
SYNE2-214ENST00000554928 CDRT15L2A8MXV6 281 aa12.01□□□□□ -0.49
SYNE2-214ENST00000554928 C9orf172C9J069 976 aa12.01□□□□□ -0.49
SYNE2-214ENST00000554928 SMAPO00193 183 aa12.01□□□□□ -0.49
SYNE2-214ENST00000554928 BTN3A1O00481 513 aa12.01□□□□□ -0.49
SYNE2-214ENST00000554928 DXOO77932 396 aaKnown RBP12.01□□□□□ -0.49
SYNE2-214ENST00000554928 SLCO2B1O94956 709 aa12.01□□□□□ -0.49
SYNE2-214ENST00000554928 TTC4O95801 387 aa12.01□□□□□ -0.49
SYNE2-214ENST00000554928 ESR1P03372 595 aa12.01□□□□□ -0.49
SYNE2-214ENST00000554928 POLR2CP19387 275 aaPredicted RBP12.01□□□□□ -0.49
SYNE2-214ENST00000554928 BDKRB1P46663 353 aa12.01□□□□□ -0.49
SYNE2-214ENST00000554928 SEPHS1P49903 392 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms