RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 DPH2Q9BQC3 489 aaPredicted RBP11.65□□□□□ -0.54
XRCC3-208ENST00000554811 IKZF5Q9H5V7 419 aa11.65□□□□□ -0.54
XRCC3-208ENST00000554811 LRTM1Q9HBL6 345 aa11.65□□□□□ -0.54
XRCC3-208ENST00000554811 PCDHA9Q9Y5H5 950 aa11.65□□□□□ -0.54
XRCC3-208ENST00000554811 SBF1O95248 1867 aa11.65□□□□□ -0.54
XRCC3-208ENST00000554811 HTTP42858 3142 aa11.65□□□□□ -0.54
XRCC3-208ENST00000554811 ELOVL7A1L3X0 281 aa11.65□□□□□ -0.54
XRCC3-208ENST00000554811 SLC38A8A6NNN8 435 aa11.65□□□□□ -0.54
XRCC3-208ENST00000554811 WDR47O94967 919 aa11.65□□□□□ -0.54
XRCC3-208ENST00000554811 INMTO95050 263 aa11.65□□□□□ -0.54
XRCC3-208ENST00000554811 HIST1H2AGP0C0S8 130 aaPredicted RBP11.65□□□□□ -0.54
XRCC3-208ENST00000554811 HSD17B1P14061 328 aa11.65□□□□□ -0.54
XRCC3-208ENST00000554811 EPB42P16452 691 aa11.65□□□□□ -0.54
XRCC3-208ENST00000554811 HIST1H2ADP20671 130 aa11.65□□□□□ -0.54
XRCC3-208ENST00000554811 PIGAP37287 484 aa11.65□□□□□ -0.54
XRCC3-208ENST00000554811 SEPHS1P49903 392 aa11.65□□□□□ -0.54
XRCC3-208ENST00000554811 TAF1AQ15573 450 aaPredicted RBP11.65□□□□□ -0.54
XRCC3-208ENST00000554811 SYT16Q17RD7 645 aa11.65□□□□□ -0.54
XRCC3-208ENST00000554811 SLC36A3Q495N2 470 aa11.65□□□□□ -0.54
XRCC3-208ENST00000554811 TMEM236Q5W0B7 351 aa11.65□□□□□ -0.54
XRCC3-208ENST00000554811 SLCO6A1Q86UG4 719 aa11.65□□□□□ -0.54
XRCC3-208ENST00000554811 PLD3Q8IV08 490 aa11.65□□□□□ -0.54
XRCC3-208ENST00000554811 LKAAEAR1Q8TD35 194 aa11.65□□□□□ -0.54
XRCC3-208ENST00000554811 SLC39A13Q96H72 371 aa11.65□□□□□ -0.54
XRCC3-208ENST00000554811 HIST1H2AHQ96KK5 128 aa11.65□□□□□ -0.54
XRCC3-208ENST00000554811 EGLN2Q96KS0 407 aa11.65□□□□□ -0.54
XRCC3-208ENST00000554811 NSMCE3Q96MG7 304 aa11.65□□□□□ -0.54
XRCC3-208ENST00000554811 HIST1H2AJQ99878 128 aa11.65□□□□□ -0.54
XRCC3-208ENST00000554811 SGIP1Q9BQI5 828 aa11.65□□□□□ -0.54
XRCC3-208ENST00000554811 H2AFJQ9BTM1 129 aa11.65□□□□□ -0.54
XRCC3-208ENST00000554811 UGT2B28Q9BY64 529 aa11.65□□□□□ -0.54
XRCC3-208ENST00000554811 SH3BP4Q9P0V3 963 aa11.65□□□□□ -0.54
XRCC3-208ENST00000554811 MAGEL2Q9UJ55 1249 aa11.65□□□□□ -0.54
XRCC3-208ENST00000554811 KIAA0100Q14667 2235 aaKnown RBP11.64□□□□□ -0.55
XRCC3-208ENST00000554811 NADKO95544 446 aaPredicted RBP11.64□□□□□ -0.55
XRCC3-208ENST00000554811 GBAP04062 536 aa11.64□□□□□ -0.55
XRCC3-208ENST00000554811 FUT4P22083 530 aa11.64□□□□□ -0.55
XRCC3-208ENST00000554811 LRRC74AQ0VAA2 488 aa11.64□□□□□ -0.55
XRCC3-208ENST00000554811 UAP1L1Q3KQV9 507 aa11.64□□□□□ -0.55
XRCC3-208ENST00000554811 CTSL3PQ5NE16 218 aa11.64□□□□□ -0.55
XRCC3-208ENST00000554811 DOK6Q6PKX4 331 aa11.64□□□□□ -0.55
XRCC3-208ENST00000554811 CACUL1Q86Y37 369 aa11.64□□□□□ -0.55
XRCC3-208ENST00000554811 ARL14EPQ8N8R7 260 aaPredicted RBP11.64□□□□□ -0.55
XRCC3-208ENST00000554811 ZNF540Q8NDQ6 660 aa11.64□□□□□ -0.55
XRCC3-208ENST00000554811 FNDC8Q8TC99 324 aa11.64□□□□□ -0.55
XRCC3-208ENST00000554811 SPPL2AQ8TCT8 520 aa11.64□□□□□ -0.55
XRCC3-208ENST00000554811 UTP15Q8TED0 518 aaKnown RBP11.64□□□□□ -0.55
XRCC3-208ENST00000554811 C1orf74Q96LT6 269 aa11.64□□□□□ -0.55
XRCC3-208ENST00000554811 C6orf62Q9GZU0 229 aaPredicted RBP11.64□□□□□ -0.55
XRCC3-208ENST00000554811 SMG9Q9H0W8 520 aaKnown RBP11.64□□□□□ -0.55
XRCC3-208ENST00000554811 EPB41L1Q9H4G0 881 aa11.64□□□□□ -0.55
XRCC3-208ENST00000554811 ZFYVE1Q9HBF4 777 aa11.64□□□□□ -0.55
XRCC3-208ENST00000554811 STARD7Q9NQZ5 370 aa11.64□□□□□ -0.55
XRCC3-208ENST00000554811 INTS10Q9NVR2 710 aaKnown RBP11.64□□□□□ -0.55
XRCC3-208ENST00000554811 NLE1Q9NVX2 485 aaPredicted RBP11.64□□□□□ -0.55
XRCC3-208ENST00000554811 PDE10AQ9Y233 779 aa11.64□□□□□ -0.55
XRCC3-208ENST00000554811 PCDHGA8Q9Y5G5 932 aa11.64□□□□□ -0.55
XRCC3-208ENST00000554811 FAM20BO75063 409 aa11.64□□□□□ -0.55
XRCC3-208ENST00000554811 OPN1SWP03999 348 aa11.64□□□□□ -0.55
XRCC3-208ENST00000554811 POU2F1P14859 743 aa11.64□□□□□ -0.55
XRCC3-208ENST00000554811 TYMPP19971 482 aa11.64□□□□□ -0.55
XRCC3-208ENST00000554811 HOXD9P28356 352 aaPredicted RBP11.64□□□□□ -0.55
XRCC3-208ENST00000554811 SLC11A1P49279 550 aa11.64□□□□□ -0.55
XRCC3-208ENST00000554811 BMXP51813 675 aa11.64□□□□□ -0.55
XRCC3-208ENST00000554811 VBP1P61758 197 aa11.64□□□□□ -0.55
XRCC3-208ENST00000554811 TIAL1Q01085 375 aaKnown RBP eCLIP11.64□□□□□ -0.55
XRCC3-208ENST00000554811 BCL2L1Q07817 233 aa11.64□□□□□ -0.55
XRCC3-208ENST00000554811 TXNDC8Q6A555 127 aa11.64□□□□□ -0.55
XRCC3-208ENST00000554811 FAM180BQ6P0A1 224 aa11.64□□□□□ -0.55
XRCC3-208ENST00000554811 ADAMTSL2Q86TH1 951 aa11.64□□□□□ -0.55
XRCC3-208ENST00000554811 RTN4RL1Q86UN2 441 aaPredicted RBP11.64□□□□□ -0.55
XRCC3-208ENST00000554811 C2orf73Q8N5S3 287 aaPredicted RBP11.64□□□□□ -0.55
XRCC3-208ENST00000554811 RORBQ92753 470 aa11.64□□□□□ -0.55
XRCC3-208ENST00000554811 TSPAN18Q96SJ8 248 aa11.64□□□□□ -0.55
XRCC3-208ENST00000554811 ITM2CQ9NQX7 267 aa11.64□□□□□ -0.55
XRCC3-208ENST00000554811 ABCB10Q9NRK6 738 aa11.64□□□□□ -0.55
XRCC3-208ENST00000554811 WDR70Q9NW82 654 aa11.64□□□□□ -0.55
XRCC3-208ENST00000554811 BLOC1S6Q9UL45 172 aa11.64□□□□□ -0.55
XRCC3-208ENST00000554811 COQ6Q9Y2Z9 468 aa11.64□□□□□ -0.55
XRCC3-208ENST00000554811 URB1O60287 2271 aaKnown RBP11.64□□□□□ -0.55
XRCC3-208ENST00000554811 OR2AG2A6NM03 316 aa11.64□□□□□ -0.55
XRCC3-208ENST00000554811 EVPLLA8MZ36 301 aa11.64□□□□□ -0.55
XRCC3-208ENST00000554811 COCHO43405 550 aa11.64□□□□□ -0.55
XRCC3-208ENST00000554811 PGRP06401 933 aa11.64□□□□□ -0.55
XRCC3-208ENST00000554811 RAP2AP10114 183 aa11.64□□□□□ -0.55
XRCC3-208ENST00000554811 CKBP12277 381 aa11.64□□□□□ -0.55
XRCC3-208ENST00000554811 CSKP41240 450 aa11.64□□□□□ -0.55
XRCC3-208ENST00000554811 GNPDA1P46926 289 aa11.64□□□□□ -0.55
XRCC3-208ENST00000554811 CYP2A13Q16696 494 aa11.64□□□□□ -0.55
XRCC3-208ENST00000554811 OR4F3Q6IEY1 312 aa11.64□□□□□ -0.55
XRCC3-208ENST00000554811 AHSA2Q719I0 299 aa11.64□□□□□ -0.55
XRCC3-208ENST00000554811 TSPAN33Q86UF1 283 aa11.64□□□□□ -0.55
XRCC3-208ENST00000554811 RGL4Q8IZJ4 473 aa11.64□□□□□ -0.55
XRCC3-208ENST00000554811 PSMA8Q8TAA3 256 aa11.64□□□□□ -0.55
XRCC3-208ENST00000554811 DPF3Q92784 378 aa11.64□□□□□ -0.55
XRCC3-208ENST00000554811 PANX1Q96RD7 426 aa11.64□□□□□ -0.55
XRCC3-208ENST00000554811 KLHL25Q9H0H3 589 aa11.64□□□□□ -0.55
XRCC3-208ENST00000554811 ZDHHC6Q9H6R6 413 aa11.64□□□□□ -0.55
XRCC3-208ENST00000554811 VPS9D1Q9Y2B5 631 aa11.64□□□□□ -0.55
XRCC3-208ENST00000554811 PRSS21Q9Y6M0 314 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms