RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 KIRREL2Q6UWL6 708 aa8.76□□□□□ -1.01
PRKCH-208ENST00000553846 BEND7Q8N7W2 519 aaPredicted RBP8.76□□□□□ -1.01
PRKCH-208ENST00000553846 CATSPER1Q8NEC5 780 aa8.76□□□□□ -1.01
PRKCH-208ENST00000553846 DNAJB14Q8TBM8 379 aa8.76□□□□□ -1.01
PRKCH-208ENST00000553846 PTERQ96BW5 349 aa8.76□□□□□ -1.01
PRKCH-208ENST00000553846 ZNF653Q96CK0 615 aa8.76□□□□□ -1.01
PRKCH-208ENST00000553846 C12orf66Q96MD2 445 aa8.76□□□□□ -1.01
PRKCH-208ENST00000553846 ERGIC2Q96RQ1 377 aa8.76□□□□□ -1.01
PRKCH-208ENST00000553846 SPSB2Q99619 263 aa8.76□□□□□ -1.01
PRKCH-208ENST00000553846 C17orf62Q9BQA9 187 aa8.76□□□□□ -1.01
PRKCH-208ENST00000553846 MESP1Q9BRJ9 268 aa8.76□□□□□ -1.01
PRKCH-208ENST00000553846 TTLL3Q9Y4R7 772 aa8.76□□□□□ -1.01
PRKCH-208ENST00000553846 STAB1Q9NY15 2570 aa8.75□□□□□ -1.01
PRKCH-208ENST00000553846 AKAP6Q13023 2319 aa8.75□□□□□ -1.01
PRKCH-208ENST00000553846 CCDC66A2RUB6 948 aa8.75□□□□□ -1.01
PRKCH-208ENST00000553846 MGAT4DA6NG13 374 aa8.75□□□□□ -1.01
PRKCH-208ENST00000553846 OR2AG2A6NM03 316 aa8.75□□□□□ -1.01
PRKCH-208ENST00000553846 TMCO5BA8MYB1 307 aa8.75□□□□□ -1.01
PRKCH-208ENST00000553846 KCNK1O00180 336 aa8.75□□□□□ -1.01
PRKCH-208ENST00000553846 DDX3XO00571 662 aaKnown RBP eCLIP8.75□□□□□ -1.01
PRKCH-208ENST00000553846 KLHL18O94889 574 aa8.75□□□□□ -1.01
PRKCH-208ENST00000553846 SLC4A1P02730 911 aa8.75□□□□□ -1.01
PRKCH-208ENST00000553846 FTLP02792 175 aaPredicted RBP8.75□□□□□ -1.01
PRKCH-208ENST00000553846 HBQ1P09105 142 aa8.75□□□□□ -1.01
PRKCH-208ENST00000553846 GZMAP12544 262 aa8.75□□□□□ -1.01
PRKCH-208ENST00000553846 FERP16591 822 aa8.75□□□□□ -1.01
PRKCH-208ENST00000553846 AGXTP21549 392 aa8.75□□□□□ -1.01
PRKCH-208ENST00000553846 CDH3P22223 829 aa8.75□□□□□ -1.01
PRKCH-208ENST00000553846 MST1P26927 711 aa8.75□□□□□ -1.01
PRKCH-208ENST00000553846 SOX11P35716 441 aa8.75□□□□□ -1.01
PRKCH-208ENST00000553846 DCDP81605 110 aaKnown RBP8.75□□□□□ -1.01
PRKCH-208ENST00000553846 MFAP5Q13361 173 aa8.75□□□□□ -1.01
PRKCH-208ENST00000553846 XRCC4Q13426 336 aa8.75□□□□□ -1.01
PRKCH-208ENST00000553846 SLC9A5Q14940 896 aa8.75□□□□□ -1.01
PRKCH-208ENST00000553846 CYP2A13Q16696 494 aa8.75□□□□□ -1.01
PRKCH-208ENST00000553846 NKAIN1Q4KMZ8 207 aa8.75□□□□□ -1.01
PRKCH-208ENST00000553846 BCL7AQ4VC05 210 aa8.75□□□□□ -1.01
PRKCH-208ENST00000553846 C1orf189Q5VU69 101 aa8.75□□□□□ -1.01
PRKCH-208ENST00000553846 AGAP7PQ5VUJ5 663 aa8.75□□□□□ -1.01
PRKCH-208ENST00000553846 MLIPQ5VWP3 458 aa8.75□□□□□ -1.01
PRKCH-208ENST00000553846 PPP1R2P3Q6NXS1 205 aa8.75□□□□□ -1.01
PRKCH-208ENST00000553846 COX15Q7KZN9 410 aa8.75□□□□□ -1.01
PRKCH-208ENST00000553846 ADGRF3Q8IZF5 1079 aa8.75□□□□□ -1.01
PRKCH-208ENST00000553846 OR4E2Q8NGC2 313 aa8.75□□□□□ -1.01
PRKCH-208ENST00000553846 OR2L2Q8NH16 312 aa8.75□□□□□ -1.01
PRKCH-208ENST00000553846 BRSK1Q8TDC3 778 aa8.75□□□□□ -1.01
PRKCH-208ENST00000553846 NAT14Q8WUY8 206 aa8.75□□□□□ -1.01
PRKCH-208ENST00000553846 PSMF1Q92530 271 aa8.75□□□□□ -1.01
PRKCH-208ENST00000553846 LINC00615Q96LM1 132 aaPredicted RBP8.75□□□□□ -1.01
PRKCH-208ENST00000553846 AGAP4Q96P64 663 aa8.75□□□□□ -1.01
PRKCH-208ENST00000553846 SPOCK3Q9BQ16 436 aa8.75□□□□□ -1.01
PRKCH-208ENST00000553846 SPRTNQ9H040 489 aaPredicted RBP8.75□□□□□ -1.01
PRKCH-208ENST00000553846 KLHL25Q9H0H3 589 aa8.75□□□□□ -1.01
PRKCH-208ENST00000553846 ENKD1Q9H0I2 346 aa8.75□□□□□ -1.01
PRKCH-208ENST00000553846 SLC26A1Q9H2B4 701 aa8.75□□□□□ -1.01
PRKCH-208ENST00000553846 MCCC2Q9HCC0 563 aa8.75□□□□□ -1.01
PRKCH-208ENST00000553846 ENAMQ9NRM1 1142 aa8.75□□□□□ -1.01
PRKCH-208ENST00000553846 DHCR7Q9UBM7 475 aaKnown RBP8.75□□□□□ -1.01
PRKCH-208ENST00000553846 SERTAD3Q9UJW9 196 aa8.75□□□□□ -1.01
PRKCH-208ENST00000553846 AP1M2Q9Y6Q5 423 aa8.75□□□□□ -1.01
PRKCH-208ENST00000553846 JMJD1CQ15652 2540 aa8.74□□□□□ -1.01
PRKCH-208ENST00000553846 ZSCAN9O15535 394 aaPredicted RBP8.74□□□□□ -1.01
PRKCH-208ENST00000553846 UGT1A9O60656 530 aa8.74□□□□□ -1.01
PRKCH-208ENST00000553846 UGT1A6P19224 532 aa8.74□□□□□ -1.01
PRKCH-208ENST00000553846 UGT1A1P22309 533 aa8.74□□□□□ -1.01
PRKCH-208ENST00000553846 UGT1A4P22310 534 aa8.74□□□□□ -1.01
PRKCH-208ENST00000553846 PBX1P40424 430 aa8.74□□□□□ -1.01
PRKCH-208ENST00000553846 TNFSF10P50591 281 aa8.74□□□□□ -1.01
PRKCH-208ENST00000553846 TMPRSS15P98073 1019 aa8.74□□□□□ -1.01
PRKCH-208ENST00000553846 PPIDQ08752 370 aaKnown RBP8.74□□□□□ -1.01
PRKCH-208ENST00000553846 GTF2H3Q13889 308 aa8.74□□□□□ -1.01
PRKCH-208ENST00000553846 PRKD1Q15139 912 aaPredicted RBP8.74□□□□□ -1.01
PRKCH-208ENST00000553846 NOMO1Q15155 1222 aa8.74□□□□□ -1.01
PRKCH-208ENST00000553846 DEFB110Q30KQ9 67 aa8.74□□□□□ -1.01
PRKCH-208ENST00000553846 VWA2Q5GFL6 755 aa8.74□□□□□ -1.01
PRKCH-208ENST00000553846 LDLRAP1Q5SW96 308 aa8.74□□□□□ -1.01
PRKCH-208ENST00000553846 XKRXQ6PP77 449 aa8.74□□□□□ -1.01
PRKCH-208ENST00000553846 TMEM220Q6QAJ8 160 aa8.74□□□□□ -1.01
PRKCH-208ENST00000553846 ZNF571Q7Z3V5 609 aaPredicted RBP8.74□□□□□ -1.01
PRKCH-208ENST00000553846 DAAM2Q86T65 1068 aa8.74□□□□□ -1.01
PRKCH-208ENST00000553846 CPNE8Q86YQ8 564 aa8.74□□□□□ -1.01
PRKCH-208ENST00000553846 C19orf47Q8N9M1 422 aaKnown RBP8.74□□□□□ -1.01
PRKCH-208ENST00000553846 ACVR1CQ8NER5 493 aa8.74□□□□□ -1.01
PRKCH-208ENST00000553846 NEK11Q8NG66 645 aa8.74□□□□□ -1.01
PRKCH-208ENST00000553846 OR11G2Q8NGC1 345 aa8.74□□□□□ -1.01
PRKCH-208ENST00000553846 ENOX1Q8TC92 643 aaKnown RBP8.74□□□□□ -1.01
PRKCH-208ENST00000553846 ADAMTS18Q8TE60 1221 aa8.74□□□□□ -1.01
PRKCH-208ENST00000553846 FKBP10Q96AY3 582 aa8.74□□□□□ -1.01
PRKCH-208ENST00000553846 CNDP1Q96KN2 507 aa8.74□□□□□ -1.01
PRKCH-208ENST00000553846 ZNF670Q9BS34 389 aa8.74□□□□□ -1.01
PRKCH-208ENST00000553846 AP1M1Q9BXS5 423 aa8.74□□□□□ -1.01
PRKCH-208ENST00000553846 GPR63Q9BZJ6 419 aa8.74□□□□□ -1.01
PRKCH-208ENST00000553846 LHPPQ9H008 270 aa8.74□□□□□ -1.01
PRKCH-208ENST00000553846 ISCUQ9H1K1 167 aa8.74□□□□□ -1.01
PRKCH-208ENST00000553846 HSD3B7Q9H2F3 369 aa8.74□□□□□ -1.01
PRKCH-208ENST00000553846 CLSTN2Q9H4D0 955 aa8.74□□□□□ -1.01
PRKCH-208ENST00000553846 TFB2MQ9H5Q4 396 aaKnown RBP8.74□□□□□ -1.01
PRKCH-208ENST00000553846 WDR54Q9H977 334 aa8.74□□□□□ -1.01
PRKCH-208ENST00000553846 UGT1A7Q9HAW7 530 aa8.74□□□□□ -1.01
PRKCH-208ENST00000553846 UGT1A10Q9HAW8 530 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms