RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 TBX4P57082 545 aa4.95□□□□□ -1.62
SCAF11-214ENST00000550893 RPS14P62263 151 aaKnown RBP4.95□□□□□ -1.62
SCAF11-214ENST00000550893 IRX4P78413 519 aa4.95□□□□□ -1.62
SCAF11-214ENST00000550893 COG7P83436 770 aa4.95□□□□□ -1.62
SCAF11-214ENST00000550893 SEMA3BQ13214 749 aa4.95□□□□□ -1.62
SCAF11-214ENST00000550893 STIM1Q13586 685 aa4.95□□□□□ -1.62
SCAF11-214ENST00000550893 CCNIQ14094 377 aa4.95□□□□□ -1.62
SCAF11-214ENST00000550893 SYCP1Q15431 976 aa4.95□□□□□ -1.62
SCAF11-214ENST00000550893 RNASE12Q5GAN4 147 aaKnown RBP4.95□□□□□ -1.62
SCAF11-214ENST00000550893 C3orf38Q5JPI3 329 aa4.95□□□□□ -1.62
SCAF11-214ENST00000550893 CERCAMQ5T4B2 595 aa4.95□□□□□ -1.62
SCAF11-214ENST00000550893 TAF3Q5VWG9 929 aa4.95□□□□□ -1.62
SCAF11-214ENST00000550893 RAP1GAP2Q684P5 730 aa4.95□□□□□ -1.62
SCAF11-214ENST00000550893 ZNF626Q68DY1 528 aa4.95□□□□□ -1.62
SCAF11-214ENST00000550893 FBXL22Q6P050 247 aa4.95□□□□□ -1.62
SCAF11-214ENST00000550893 KDM7AQ6ZMT4 941 aa4.95□□□□□ -1.62
SCAF11-214ENST00000550893 IRF2BP2Q7Z5L9 587 aa4.95□□□□□ -1.62
SCAF11-214ENST00000550893 ANKS1BQ7Z6G8 1248 aa4.95□□□□□ -1.62
SCAF11-214ENST00000550893 YTHDF3Q7Z739 585 aaKnown RBP4.95□□□□□ -1.62
SCAF11-214ENST00000550893 PIP4P1Q86T03 277 aa4.95□□□□□ -1.62
SCAF11-214ENST00000550893 NLRP14Q86W24 1093 aa4.95□□□□□ -1.62
SCAF11-214ENST00000550893 CACUL1Q86Y37 369 aa4.95□□□□□ -1.62
SCAF11-214ENST00000550893 SIX6OS1Q8N1H7 587 aa4.95□□□□□ -1.62
SCAF11-214ENST00000550893 AADATQ8N5Z0 425 aa4.95□□□□□ -1.62
SCAF11-214ENST00000550893 DEFB119Q8N690 84 aa4.95□□□□□ -1.62
SCAF11-214ENST00000550893 EMC1Q8N766 993 aa4.95□□□□□ -1.62
SCAF11-214ENST00000550893 FAM156AQ8NDB6 213 aa4.95□□□□□ -1.62
SCAF11-214ENST00000550893 CENPIQ92674 756 aaPredicted RBP4.95□□□□□ -1.62
SCAF11-214ENST00000550893 NMD3Q96D46 503 aaKnown RBP4.95□□□□□ -1.62
SCAF11-214ENST00000550893 PGAP3Q96FM1 320 aaPredicted RBP4.95□□□□□ -1.62
SCAF11-214ENST00000550893 RITA1Q96K30 269 aa4.95□□□□□ -1.62
SCAF11-214ENST00000550893 PPP1R13BQ96KQ4 1090 aa4.95□□□□□ -1.62
SCAF11-214ENST00000550893 PEBP4Q96S96 227 aa4.95□□□□□ -1.62
SCAF11-214ENST00000550893 PPP1R9BQ96SB3 815 aa4.95□□□□□ -1.62
SCAF11-214ENST00000550893 TBCBQ99426 244 aa4.95□□□□□ -1.62
SCAF11-214ENST00000550893 QTRT1Q9BXR0 403 aaKnown RBP4.95□□□□□ -1.62
SCAF11-214ENST00000550893 VPS16Q9H269 839 aa4.95□□□□□ -1.62
SCAF11-214ENST00000550893 LRRC4Q9HBW1 653 aa4.95□□□□□ -1.62
SCAF11-214ENST00000550893 PRSS16Q9NQE7 514 aa4.95□□□□□ -1.62
SCAF11-214ENST00000550893 ELOVL2Q9NXB9 296 aa4.95□□□□□ -1.62
SCAF11-214ENST00000550893 WSB2Q9NYS7 404 aaPredicted RBP4.95□□□□□ -1.62
SCAF11-214ENST00000550893 SLCO3A1Q9UIG8 710 aa4.95□□□□□ -1.62
SCAF11-214ENST00000550893 GGA2Q9UJY4 613 aa4.95□□□□□ -1.62
SCAF11-214ENST00000550893 SARDHQ9UL12 918 aa4.95□□□□□ -1.62
SCAF11-214ENST00000550893 PAXBP1Q9Y5B6 917 aa4.95□□□□□ -1.62
SCAF11-214ENST00000550893 PTPRQQ9UMZ3 2332 aa4.94□□□□□ -1.62
SCAF11-214ENST00000550893 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.94□□□□□ -1.62
SCAF11-214ENST00000550893 TBC1D3BA6NDS4 549 aa4.94□□□□□ -1.62
SCAF11-214ENST00000550893 MBD3L4A6NDZ8 208 aaPredicted RBP4.94□□□□□ -1.62
SCAF11-214ENST00000550893 MBD3L3A6NE82 208 aaPredicted RBP4.94□□□□□ -1.62
SCAF11-214ENST00000550893 C2CD4BA6NLJ0 364 aa4.94□□□□□ -1.62
SCAF11-214ENST00000550893 TTC34A8MYJ7 566 aa4.94□□□□□ -1.62
SCAF11-214ENST00000550893 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.94□□□□□ -1.62
SCAF11-214ENST00000550893 H7C1Q1 480 aa4.94□□□□□ -1.62
SCAF11-214ENST00000550893 PLK4O00444 970 aa4.94□□□□□ -1.62
SCAF11-214ENST00000550893 PPP6CO00743 305 aa4.94□□□□□ -1.62
SCAF11-214ENST00000550893 SMAD6O43541 496 aaKnown RBP4.94□□□□□ -1.62
SCAF11-214ENST00000550893 SNAP91O60641 907 aa4.94□□□□□ -1.62
SCAF11-214ENST00000550893 TBL1XO60907 577 aa4.94□□□□□ -1.62
SCAF11-214ENST00000550893 HSF2BPO75031 334 aa4.94□□□□□ -1.62
SCAF11-214ENST00000550893 SRGAP2O75044 1071 aa4.94□□□□□ -1.62
SCAF11-214ENST00000550893 RASSF9O75901 435 aa4.94□□□□□ -1.62
SCAF11-214ENST00000550893 GFPT2O94808 682 aa4.94□□□□□ -1.62
SCAF11-214ENST00000550893 LUC7L3O95232 432 aaKnown RBP4.94□□□□□ -1.62
SCAF11-214ENST00000550893 RASAL1O95294 804 aa4.94□□□□□ -1.62
SCAF11-214ENST00000550893 TUBB4AP04350 444 aa4.94□□□□□ -1.62
SCAF11-214ENST00000550893 WNT1P04628 370 aa4.94□□□□□ -1.62
SCAF11-214ENST00000550893 CD59P13987 128 aa4.94□□□□□ -1.62
SCAF11-214ENST00000550893 PRKAR1BP31321 381 aa4.94□□□□□ -1.62
SCAF11-214ENST00000550893 ACSL1P33121 698 aa4.94□□□□□ -1.62
SCAF11-214ENST00000550893 MTIF2P46199 727 aaKnown RBP4.94□□□□□ -1.62
SCAF11-214ENST00000550893 TPMTP51580 245 aa4.94□□□□□ -1.62
SCAF11-214ENST00000550893 RENBPP51606 427 aa4.94□□□□□ -1.62
SCAF11-214ENST00000550893 PLK1P53350 603 aa4.94□□□□□ -1.62
SCAF11-214ENST00000550893 TAS2R38P59533 333 aa4.94□□□□□ -1.62
SCAF11-214ENST00000550893 YWHAEP62258 255 aaKnown RBP4.94□□□□□ -1.62
SCAF11-214ENST00000550893 YWHAZP63104 245 aaKnown RBP4.94□□□□□ -1.62
SCAF11-214ENST00000550893 CDR2Q01850 454 aa4.94□□□□□ -1.62
SCAF11-214ENST00000550893 MYL5Q02045 173 aa4.94□□□□□ -1.62
SCAF11-214ENST00000550893 SHBQ15464 509 aa4.94□□□□□ -1.62
SCAF11-214ENST00000550893 INSCQ1MX18 579 aa4.94□□□□□ -1.62
SCAF11-214ENST00000550893 C15orf59Q2T9L4 293 aaPredicted RBP4.94□□□□□ -1.62
SCAF11-214ENST00000550893 CCDC14Q49A88 953 aa4.94□□□□□ -1.62
SCAF11-214ENST00000550893 EOGTQ5NDL2 527 aa4.94□□□□□ -1.62
SCAF11-214ENST00000550893 MPP7Q5T2T1 576 aa4.94□□□□□ -1.62
SCAF11-214ENST00000550893 C9orf64Q5T6V5 341 aa4.94□□□□□ -1.62
SCAF11-214ENST00000550893 STPG1Q5TH74 334 aa4.94□□□□□ -1.62
SCAF11-214ENST00000550893 RNF220Q5VTB9 566 aa4.94□□□□□ -1.62
SCAF11-214ENST00000550893 CACHD1Q5VU97 1274 aa4.94□□□□□ -1.62
SCAF11-214ENST00000550893 NAA35Q5VZE5 725 aa4.94□□□□□ -1.62
SCAF11-214ENST00000550893 CHST9Q7L1S5 443 aa4.94□□□□□ -1.62
SCAF11-214ENST00000550893 ENOSF1Q7L5Y1 443 aa4.94□□□□□ -1.62
SCAF11-214ENST00000550893 CACNA2D4Q7Z3S7 1137 aa4.94□□□□□ -1.62
SCAF11-214ENST00000550893 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.94□□□□□ -1.62
SCAF11-214ENST00000550893 CCAR2Q8N163 923 aaKnown RBP4.94□□□□□ -1.62
SCAF11-214ENST00000550893 MYO1HQ8N1T3 1032 aa4.94□□□□□ -1.62
SCAF11-214ENST00000550893 ARHGAP18Q8N392 663 aa4.94□□□□□ -1.62
SCAF11-214ENST00000550893 CCDC185Q8N715 623 aa4.94□□□□□ -1.62
SCAF11-214ENST00000550893 CCDC150Q8NCX0 1101 aa4.94□□□□□ -1.62
SCAF11-214ENST00000550893 FIBINQ8TAL6 211 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms