RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 SLC29A3Q9BZD2 475 aa22.42■■□□□ 1.18
SMARCD1-209ENST00000550477 MVB12BQ9H7P6 319 aa22.42■■□□□ 1.18
SMARCD1-209ENST00000550477 EFR3BQ9Y2G0 817 aa22.42■■□□□ 1.18
SMARCD1-209ENST00000550477 ESPL1Q14674 2120 aa22.42■■□□□ 1.18
SMARCD1-209ENST00000550477 MED13Q9UHV7 2174 aa22.41■■□□□ 1.18
SMARCD1-209ENST00000550477 MACROD2A1Z1Q3 448 aa22.41■■□□□ 1.18
SMARCD1-209ENST00000550477 C2orf74A8MZ97 194 aa22.41■■□□□ 1.18
SMARCD1-209ENST00000550477 KLHL41O60662 606 aa22.41■■□□□ 1.18
SMARCD1-209ENST00000550477 CD63P08962 238 aa22.41■■□□□ 1.18
SMARCD1-209ENST00000550477 GSTM1P09488 218 aa22.41■■□□□ 1.18
SMARCD1-209ENST00000550477 SPTBP11277 2137 aa22.41■■□□□ 1.18
SMARCD1-209ENST00000550477 GSTM4Q03013 218 aa22.41■■□□□ 1.18
SMARCD1-209ENST00000550477 LAMB3Q13751 1172 aa22.41■■□□□ 1.18
SMARCD1-209ENST00000550477 NADK2Q4G0N4 442 aa22.41■■□□□ 1.18
SMARCD1-209ENST00000550477 ANKRD20A2Q5SQ80 823 aa22.41■■□□□ 1.18
SMARCD1-209ENST00000550477 ANKRD20A1Q5TYW2 823 aa22.41■■□□□ 1.18
SMARCD1-209ENST00000550477 ANKRD20A3Q5VUR7 823 aa22.41■■□□□ 1.18
SMARCD1-209ENST00000550477 C11orf63Q6NUN7 778 aa22.41■■□□□ 1.18
SMARCD1-209ENST00000550477 FBXO38Q6PIJ6 1188 aa22.41■■□□□ 1.18
SMARCD1-209ENST00000550477 IP6K3Q96PC2 410 aa22.41■■□□□ 1.18
SMARCD1-209ENST00000550477 APOL2Q9BQE5 337 aa22.41■■□□□ 1.18
SMARCD1-209ENST00000550477 TFB2MQ9H5Q4 396 aaKnown RBP22.41■■□□□ 1.18
SMARCD1-209ENST00000550477 MAP4K5Q9Y4K4 846 aa22.41■■□□□ 1.18
SMARCD1-209ENST00000550477 ZNF185O15231 689 aa22.4■■□□□ 1.18
SMARCD1-209ENST00000550477 ADRA1AP35348 466 aa22.4■■□□□ 1.18
SMARCD1-209ENST00000550477 ITGA1P56199 1179 aa22.4■■□□□ 1.18
SMARCD1-209ENST00000550477 TMPRSS15P98073 1019 aa22.4■■□□□ 1.18
SMARCD1-209ENST00000550477 XIAPP98170 497 aa22.4■■□□□ 1.18
SMARCD1-209ENST00000550477 RPA4Q13156 261 aa22.4■■□□□ 1.18
SMARCD1-209ENST00000550477 DARS2Q6PI48 645 aaKnown RBP22.4■■□□□ 1.18
SMARCD1-209ENST00000550477 SYTL1Q8IYJ3 562 aa22.4■■□□□ 1.18
SMARCD1-209ENST00000550477 ADAMTS17Q8TE56 1095 aa22.4■■□□□ 1.18
SMARCD1-209ENST00000550477 TBRG4Q969Z0 631 aaKnown RBP eCLIP22.4■■□□□ 1.18
SMARCD1-209ENST00000550477 SGSM3Q96HU1 749 aa22.4■■□□□ 1.18
SMARCD1-209ENST00000550477 ALS2CR12Q96Q35 445 aa22.4■■□□□ 1.18
SMARCD1-209ENST00000550477 TBL1YQ9BQ87 522 aa22.4■■□□□ 1.18
SMARCD1-209ENST00000550477 DHRS4Q9BTZ2 278 aa22.4■■□□□ 1.18
SMARCD1-209ENST00000550477 COG4Q9H9E3 785 aa22.4■■□□□ 1.18
SMARCD1-209ENST00000550477 ZDHHC3Q9NYG2 299 aa22.4■■□□□ 1.18
SMARCD1-209ENST00000550477 GPR83Q9NYM4 423 aa22.4■■□□□ 1.18
SMARCD1-209ENST00000550477 MAP10Q9P2G4 905 aa22.4■■□□□ 1.18
SMARCD1-209ENST00000550477 SPTBN1Q01082 2364 aaKnown RBP22.4■■□□□ 1.18
SMARCD1-209ENST00000550477 KCNN4O15554 427 aa22.39■■□□□ 1.17
SMARCD1-209ENST00000550477 CEACAM4O75871 244 aa22.39■■□□□ 1.17
SMARCD1-209ENST00000550477 IGHEP01854 428 aa22.39■■□□□ 1.17
SMARCD1-209ENST00000550477 RBP3P10745 1247 aa22.39■■□□□ 1.17
SMARCD1-209ENST00000550477 PSMB4P28070 264 aa22.39■■□□□ 1.17
SMARCD1-209ENST00000550477 RORAP35398 523 aa22.39■■□□□ 1.17
SMARCD1-209ENST00000550477 UQCRFS1P47985 274 aa22.39■■□□□ 1.17
SMARCD1-209ENST00000550477 EIF3EP60228 445 aaKnown RBP22.39■■□□□ 1.17
SMARCD1-209ENST00000550477 OTUD4Q01804 1114 aaKnown RBP22.39■■□□□ 1.17
SMARCD1-209ENST00000550477 AMIGO1Q86WK6 493 aa22.39■■□□□ 1.17
SMARCD1-209ENST00000550477 CCDC170Q8IYT3 715 aa22.39■■□□□ 1.17
SMARCD1-209ENST00000550477 OR13C4Q8NGS5 318 aa22.39■■□□□ 1.17
SMARCD1-209ENST00000550477 OR1L3Q8NH93 324 aa22.39■■□□□ 1.17
SMARCD1-209ENST00000550477 ACTL9Q8TC94 416 aa22.39■■□□□ 1.17
SMARCD1-209ENST00000550477 SSC4DQ8WTU2 575 aa22.39■■□□□ 1.17
SMARCD1-209ENST00000550477 PPM1MQ96MI6 270 aa22.39■■□□□ 1.17
SMARCD1-209ENST00000550477 GOLPH3Q9H4A6 298 aa22.39■■□□□ 1.17
SMARCD1-209ENST00000550477 PCMTD2Q9NV79 361 aa22.39■■□□□ 1.17
SMARCD1-209ENST00000550477 CUEDC1Q9NWM3 386 aaPredicted RBP22.39■■□□□ 1.17
SMARCD1-209ENST00000550477 GPN3Q9UHW5 284 aaPredicted RBP22.39■■□□□ 1.17
SMARCD1-209ENST00000550477 CYLC1P35663 651 aaPredicted RBP22.38■■□□□ 1.17
SMARCD1-209ENST00000550477 ABRQ12979 859 aa22.38■■□□□ 1.17
SMARCD1-209ENST00000550477 INPP5JQ15735 1006 aaPredicted RBP22.38■■□□□ 1.17
SMARCD1-209ENST00000550477 ZRANB3Q5FWF4 1079 aa22.38■■□□□ 1.17
SMARCD1-209ENST00000550477 PRAMEF17Q5VTA0 474 aa22.38■■□□□ 1.17
SMARCD1-209ENST00000550477 JMJD6Q6NYC1 403 aaPredicted RBP22.38■■□□□ 1.17
SMARCD1-209ENST00000550477 TAS2R42Q7RTR8 314 aa22.38■■□□□ 1.17
SMARCD1-209ENST00000550477 LILRA3Q8N6C8 439 aaPredicted RBP22.38■■□□□ 1.17
SMARCD1-209ENST00000550477 FDCSPQ8NFU4 85 aa22.38■■□□□ 1.17
SMARCD1-209ENST00000550477 NAT14Q8WUY8 206 aa22.38■■□□□ 1.17
SMARCD1-209ENST00000550477 TFGQ92734 400 aaPredicted RBP22.38■■□□□ 1.17
SMARCD1-209ENST00000550477 PITPNM3Q9BZ71 974 aa22.38■■□□□ 1.17
SMARCD1-209ENST00000550477 FAM96AQ9H5X1 160 aa22.38■■□□□ 1.17
SMARCD1-209ENST00000550477 C10orf88Q9H8K7 445 aa22.38■■□□□ 1.17
SMARCD1-209ENST00000550477 C5AR2Q9P296 337 aa22.38■■□□□ 1.17
SMARCD1-209ENST00000550477 PCDHA13Q9Y5I0 950 aa22.38■■□□□ 1.17
SMARCD1-209ENST00000550477 AP1M2Q9Y6Q5 423 aa22.38■■□□□ 1.17
SMARCD1-209ENST00000550477 RELNP78509 3460 aa22.38■■□□□ 1.17
SMARCD1-209ENST00000550477 A6NL46 340 aa22.37■■□□□ 1.17
SMARCD1-209ENST00000550477 QSOX1O00391 747 aa22.37■■□□□ 1.17
SMARCD1-209ENST00000550477 BTN3A3O00478 584 aa22.37■■□□□ 1.17
SMARCD1-209ENST00000550477 BTN3A1O00481 513 aa22.37■■□□□ 1.17
SMARCD1-209ENST00000550477 SGTAO43765 313 aa22.37■■□□□ 1.17
SMARCD1-209ENST00000550477 KDM1AO60341 852 aa22.37■■□□□ 1.17
SMARCD1-209ENST00000550477 SORBS2O94875 1100 aaKnown RBP22.37■■□□□ 1.17
SMARCD1-209ENST00000550477 TJP3O95049 919 aa22.37■■□□□ 1.17
SMARCD1-209ENST00000550477 LCA5LO95447 670 aa22.37■■□□□ 1.17
SMARCD1-209ENST00000550477 PTMAP06454 111 aaKnown RBP22.37■■□□□ 1.17
SMARCD1-209ENST00000550477 ST6GAL1P15907 406 aa22.37■■□□□ 1.17
SMARCD1-209ENST00000550477 MC4RP32245 332 aa22.37■■□□□ 1.17
SMARCD1-209ENST00000550477 LMAN1P49257 510 aa22.37■■□□□ 1.17
SMARCD1-209ENST00000550477 NAP1L1P55209 391 aaKnown RBP22.37■■□□□ 1.17
SMARCD1-209ENST00000550477 NCF4Q15080 339 aa22.37■■□□□ 1.17
SMARCD1-209ENST00000550477 GLIS1Q8NBF1 620 aa22.37■■□□□ 1.17
SMARCD1-209ENST00000550477 PHC3Q8NDX5 983 aa22.37■■□□□ 1.17
SMARCD1-209ENST00000550477 OR52E1Q8NGJ3 308 aa22.37■■□□□ 1.17
SMARCD1-209ENST00000550477 PNPLA2Q96AD5 504 aa22.37■■□□□ 1.17
SMARCD1-209ENST00000550477 FER1L6-AS2Q96M78 137 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms