RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 IKZF3Q9UKT9 509 aa12.73□□□□□ -0.37
RAB5C-206ENST00000550406 CDV3Q9UKY7 258 aaKnown RBP12.73□□□□□ -0.37
RAB5C-206ENST00000550406 RUVBL2Q9Y230 463 aaKnown RBP12.73□□□□□ -0.37
RAB5C-206ENST00000550406 NFS1Q9Y697 457 aa12.73□□□□□ -0.37
RAB5C-206ENST00000550406 PTPRBP23467 1997 aa12.72□□□□□ -0.37
RAB5C-206ENST00000550406 CPED1A4D0V7 1026 aa12.72□□□□□ -0.37
RAB5C-206ENST00000550406 PHGDHO43175 533 aaKnown RBP12.72□□□□□ -0.37
RAB5C-206ENST00000550406 B4GAT1O43505 415 aa12.72□□□□□ -0.37
RAB5C-206ENST00000550406 TNFSF14O43557 240 aa12.72□□□□□ -0.37
RAB5C-206ENST00000550406 MATN4O95460 622 aa12.72□□□□□ -0.37
RAB5C-206ENST00000550406 NUDT17P0C025 328 aa12.72□□□□□ -0.37
RAB5C-206ENST00000550406 SLC2A4P14672 509 aa12.72□□□□□ -0.37
RAB5C-206ENST00000550406 GLB1P16278 677 aa12.72□□□□□ -0.37
RAB5C-206ENST00000550406 ATP5DP30049 168 aa12.72□□□□□ -0.37
RAB5C-206ENST00000550406 SKIV2L2P42285 1042 aaKnown RBP12.72□□□□□ -0.37
RAB5C-206ENST00000550406 HALP42357 657 aa12.72□□□□□ -0.37
RAB5C-206ENST00000550406 ACADVLP49748 655 aa12.72□□□□□ -0.37
RAB5C-206ENST00000550406 HHEXQ03014 270 aa12.72□□□□□ -0.37
RAB5C-206ENST00000550406 GRB7Q14451 532 aa12.72□□□□□ -0.37
RAB5C-206ENST00000550406 USP10Q14694 798 aaKnown RBP12.72□□□□□ -0.37
RAB5C-206ENST00000550406 NR1D2Q14995 579 aa12.72□□□□□ -0.37
RAB5C-206ENST00000550406 TMED2Q15363 201 aa12.72□□□□□ -0.37
RAB5C-206ENST00000550406 TRIP6Q15654 476 aaKnown RBP12.72□□□□□ -0.37
RAB5C-206ENST00000550406 BEND6Q5SZJ8 279 aaPredicted RBP12.72□□□□□ -0.37
RAB5C-206ENST00000550406 EFL1Q7Z2Z2 1120 aaKnown RBP12.72□□□□□ -0.37
RAB5C-206ENST00000550406 CMC1Q7Z7K0 106 aa12.72□□□□□ -0.37
RAB5C-206ENST00000550406 SLC9B2Q86UD5 537 aa12.72□□□□□ -0.37
RAB5C-206ENST00000550406 CYP4X1Q8N118 509 aa12.72□□□□□ -0.37
RAB5C-206ENST00000550406 ANKRD49Q8WVL7 239 aa12.72□□□□□ -0.37
RAB5C-206ENST00000550406 CCDC74AQ96AQ1 378 aa12.72□□□□□ -0.37
RAB5C-206ENST00000550406 IMP3Q9NV31 184 aaKnown RBP12.72□□□□□ -0.37
RAB5C-206ENST00000550406 DLL3Q9NYJ7 618 aa12.72□□□□□ -0.37
RAB5C-206ENST00000550406 LRIT1Q9P2V4 623 aa12.72□□□□□ -0.37
RAB5C-206ENST00000550406 CTNNAL1Q9UBT7 734 aa12.72□□□□□ -0.37
RAB5C-206ENST00000550406 SLC24A2Q9UI40 661 aa12.72□□□□□ -0.37
RAB5C-206ENST00000550406 CEP250Q9BV73 2442 aa12.71□□□□□ -0.37
RAB5C-206ENST00000550406 SPAARA0A1B0GVQ0 90 aa12.71□□□□□ -0.37
RAB5C-206ENST00000550406 DCDC2BA2VCK2 349 aa12.71□□□□□ -0.37
RAB5C-206ENST00000550406 CCDC151A5D8V7 595 aa12.71□□□□□ -0.37
RAB5C-206ENST00000550406 NUDT21O43809 227 aaKnown RBP12.71□□□□□ -0.37
RAB5C-206ENST00000550406 TCEA3O75764 348 aa12.71□□□□□ -0.37
RAB5C-206ENST00000550406 DKK1O94907 266 aa12.71□□□□□ -0.37
RAB5C-206ENST00000550406 KCNK5O95279 499 aa12.71□□□□□ -0.37
RAB5C-206ENST00000550406 VIPP01282 170 aa12.71□□□□□ -0.37
RAB5C-206ENST00000550406 ALDOAP04075 364 aaKnown RBP12.71□□□□□ -0.37
RAB5C-206ENST00000550406 INHBAP08476 426 aa12.71□□□□□ -0.37
RAB5C-206ENST00000550406 MPC1LP0DKB6 136 aa12.71□□□□□ -0.37
RAB5C-206ENST00000550406 CBSLP0DN79 551 aa12.71□□□□□ -0.37
RAB5C-206ENST00000550406 CBSP35520 551 aa12.71□□□□□ -0.37
RAB5C-206ENST00000550406 MAGEA12P43365 314 aa12.71□□□□□ -0.37
RAB5C-206ENST00000550406 RPIAP49247 311 aa12.71□□□□□ -0.37
RAB5C-206ENST00000550406 SERPINB9P50453 376 aa12.71□□□□□ -0.37
RAB5C-206ENST00000550406 DAB2P98082 770 aa12.71□□□□□ -0.37
RAB5C-206ENST00000550406 ILF2Q12905 390 aaKnown RBP12.71□□□□□ -0.37
RAB5C-206ENST00000550406 DLG1Q12959 904 aa12.71□□□□□ -0.37
RAB5C-206ENST00000550406 PDAP1Q13442 181 aaKnown RBP12.71□□□□□ -0.37
RAB5C-206ENST00000550406 GPR18Q14330 331 aa12.71□□□□□ -0.37
RAB5C-206ENST00000550406 CCSMST1Q4G0I0 132 aa12.71□□□□□ -0.37
RAB5C-206ENST00000550406 UGT3A1Q6NUS8 523 aa12.71□□□□□ -0.37
RAB5C-206ENST00000550406 TMEM26Q6ZUK4 368 aa12.71□□□□□ -0.37
RAB5C-206ENST00000550406 NEK10Q6ZWH5 1172 aa12.71□□□□□ -0.37
RAB5C-206ENST00000550406 PIWIL4Q7Z3Z4 852 aaKnown RBP12.71□□□□□ -0.37
RAB5C-206ENST00000550406 OR5AR1Q8NGP9 310 aa12.71□□□□□ -0.37
RAB5C-206ENST00000550406 CFAP61Q8NHU2 1237 aa12.71□□□□□ -0.37
RAB5C-206ENST00000550406 IFI44Q8TCB0 444 aa12.71□□□□□ -0.37
RAB5C-206ENST00000550406 EPS8L3Q8TE67 593 aaKnown RBP12.71□□□□□ -0.37
RAB5C-206ENST00000550406 MZB1Q8WU39 189 aa12.71□□□□□ -0.37
RAB5C-206ENST00000550406 JPH3Q8WXH2 748 aaPredicted RBP12.71□□□□□ -0.37
RAB5C-206ENST00000550406 DLG3Q92796 817 aa12.71□□□□□ -0.37
RAB5C-206ENST00000550406 ISL2Q96A47 359 aa12.71□□□□□ -0.37
RAB5C-206ENST00000550406 CXorf40BQ96DE9 158 aa12.71□□□□□ -0.37
RAB5C-206ENST00000550406 FERD3LQ96RJ6 166 aa12.71□□□□□ -0.37
RAB5C-206ENST00000550406 RTKNQ9BST9 563 aa12.71□□□□□ -0.37
RAB5C-206ENST00000550406 TBC1D10AQ9BXI6 508 aa12.71□□□□□ -0.37
RAB5C-206ENST00000550406 POPDC3Q9HBV1 291 aa12.71□□□□□ -0.37
RAB5C-206ENST00000550406 NCKIPSDQ9NZQ3 722 aa12.71□□□□□ -0.37
RAB5C-206ENST00000550406 ADAMTS6Q9UKP5 1117 aa12.71□□□□□ -0.37
RAB5C-206ENST00000550406 SNRNP200O75643 2136 aaKnown RBP12.71□□□□□ -0.38
RAB5C-206ENST00000550406 KRT87PA6NCN2 255 aa12.7□□□□□ -0.38
RAB5C-206ENST00000550406 RHPN2P1A8MT19 583 aa12.7□□□□□ -0.38
RAB5C-206ENST00000550406 FOXO6A8MYZ6 492 aa12.7□□□□□ -0.38
RAB5C-206ENST00000550406 TRIM49D1C9J1S8 452 aa12.7□□□□□ -0.38
RAB5C-206ENST00000550406 GFYI3L273 518 aa12.7□□□□□ -0.38
RAB5C-206ENST00000550406 EIF3FO00303 357 aaPredicted RBP12.7□□□□□ -0.38
RAB5C-206ENST00000550406 IFRD1O00458 451 aaPredicted RBP12.7□□□□□ -0.38
RAB5C-206ENST00000550406 PSIP1O75475 530 aaKnown RBP12.7□□□□□ -0.38
RAB5C-206ENST00000550406 C1orf105O95561 183 aa12.7□□□□□ -0.38
RAB5C-206ENST00000550406 SLC35E2BP0CK96 405 aa12.7□□□□□ -0.38
RAB5C-206ENST00000550406 CEACAM1P13688 526 aa12.7□□□□□ -0.38
RAB5C-206ENST00000550406 ENO3P13929 434 aaPredicted RBP12.7□□□□□ -0.38
RAB5C-206ENST00000550406 PNLIPP16233 465 aa12.7□□□□□ -0.38
RAB5C-206ENST00000550406 STMN1P16949 149 aa12.7□□□□□ -0.38
RAB5C-206ENST00000550406 ZNF37AP17032 561 aaPredicted RBP12.7□□□□□ -0.38
RAB5C-206ENST00000550406 DUSP3P51452 185 aaPredicted RBP12.7□□□□□ -0.38
RAB5C-206ENST00000550406 OR1D5P58170 312 aa12.7□□□□□ -0.38
RAB5C-206ENST00000550406 RAB10P61026 200 aa12.7□□□□□ -0.38
RAB5C-206ENST00000550406 CCL7P80098 99 aa12.7□□□□□ -0.38
RAB5C-206ENST00000550406 CFHR1Q03591 330 aa12.7□□□□□ -0.38
RAB5C-206ENST00000550406 PRKG2Q13237 762 aa12.7□□□□□ -0.38
RAB5C-206ENST00000550406 TTLL9Q3SXZ7 439 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms