RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 UGT1A4P22310 534 aa13.12□□□□□ -0.31
NUP188-211ENST00000550219 AKT1P31749 480 aa13.12□□□□□ -0.31
NUP188-211ENST00000550219 HMGCLP35914 325 aa13.12□□□□□ -0.31
NUP188-211ENST00000550219 DLSTP36957 453 aa13.12□□□□□ -0.31
NUP188-211ENST00000550219 ARL4CP56559 192 aa13.12□□□□□ -0.31
NUP188-211ENST00000550219 PPP1CAP62136 330 aa13.12□□□□□ -0.31
NUP188-211ENST00000550219 TLE1Q04724 770 aa13.12□□□□□ -0.31
NUP188-211ENST00000550219 NAA30Q147X3 362 aaPredicted RBP13.12□□□□□ -0.31
NUP188-211ENST00000550219 PLCL1Q15111 1095 aa13.12□□□□□ -0.31
NUP188-211ENST00000550219 SKIDA1Q1XH10 827 aa13.12□□□□□ -0.31
NUP188-211ENST00000550219 ABRAXAS1Q6UWZ7 409 aa13.12□□□□□ -0.31
NUP188-211ENST00000550219 DET1Q7L5Y6 550 aa13.12□□□□□ -0.31
NUP188-211ENST00000550219 C11orf96Q7Z7L8 435 aa13.12□□□□□ -0.31
NUP188-211ENST00000550219 AGGF1Q8N302 714 aaeCLIP13.12□□□□□ -0.31
NUP188-211ENST00000550219 DNAAF3Q8N9W5 541 aa13.12□□□□□ -0.31
NUP188-211ENST00000550219 GALNT6Q8NCL4 622 aa13.12□□□□□ -0.31
NUP188-211ENST00000550219 MYRIPQ8NFW9 859 aa13.12□□□□□ -0.31
NUP188-211ENST00000550219 C9orf43Q8TAL5 461 aaPredicted RBP13.12□□□□□ -0.31
NUP188-211ENST00000550219 BRSK1Q8TDC3 778 aa13.12□□□□□ -0.31
NUP188-211ENST00000550219 IFT81Q8WYA0 676 aa13.12□□□□□ -0.31
NUP188-211ENST00000550219 SIGLEC10Q96LC7 697 aa13.12□□□□□ -0.31
NUP188-211ENST00000550219 RANBP9Q96S59 729 aa13.12□□□□□ -0.31
NUP188-211ENST00000550219 SPRY4Q9C004 299 aa13.12□□□□□ -0.31
NUP188-211ENST00000550219 IL22Q9GZX6 179 aa13.12□□□□□ -0.31
NUP188-211ENST00000550219 TRIT1Q9H3H1 467 aaKnown RBP13.12□□□□□ -0.31
NUP188-211ENST00000550219 ZNF768Q9H5H4 540 aaKnown RBP13.12□□□□□ -0.31
NUP188-211ENST00000550219 UGT1A7Q9HAW7 530 aa13.12□□□□□ -0.31
NUP188-211ENST00000550219 UGT1A10Q9HAW8 530 aa13.12□□□□□ -0.31
NUP188-211ENST00000550219 UGT1A8Q9HAW9 530 aa13.12□□□□□ -0.31
NUP188-211ENST00000550219 IL26Q9NPH9 171 aa13.12□□□□□ -0.31
NUP188-211ENST00000550219 ZNF71Q9NQZ8 489 aaPredicted RBP13.12□□□□□ -0.31
NUP188-211ENST00000550219 BFARQ9NZS9 450 aa13.12□□□□□ -0.31
NUP188-211ENST00000550219 HACD3Q9P035 362 aa13.12□□□□□ -0.31
NUP188-211ENST00000550219 CROTQ9UKG9 612 aa13.12□□□□□ -0.31
NUP188-211ENST00000550219 RAB21Q9UL25 225 aa13.12□□□□□ -0.31
NUP188-211ENST00000550219 PKP3Q9Y446 797 aa13.12□□□□□ -0.31
NUP188-211ENST00000550219 TENM4Q6N022 2769 aa13.12□□□□□ -0.31
NUP188-211ENST00000550219 PRR19A6NJB7 356 aa13.11□□□□□ -0.31
NUP188-211ENST00000550219 SDR42E2A6NKP2 422 aa13.11□□□□□ -0.31
NUP188-211ENST00000550219 TUBBP07437 444 aa13.11□□□□□ -0.31
NUP188-211ENST00000550219 TPH1P17752 444 aa13.11□□□□□ -0.31
NUP188-211ENST00000550219 PSMA3P25788 255 aa13.11□□□□□ -0.31
NUP188-211ENST00000550219 CA5AP35218 305 aa13.11□□□□□ -0.31
NUP188-211ENST00000550219 CTSCP53634 463 aa13.11□□□□□ -0.31
NUP188-211ENST00000550219 SESN2P58004 480 aaPredicted RBP13.11□□□□□ -0.31
NUP188-211ENST00000550219 NFE2L1Q14494 772 aa13.11□□□□□ -0.31
NUP188-211ENST00000550219 PTPRCAPQ14761 206 aa13.11□□□□□ -0.31
NUP188-211ENST00000550219 HIF1AQ16665 826 aa13.11□□□□□ -0.31
NUP188-211ENST00000550219 MSS51Q4VC12 460 aa13.11□□□□□ -0.31
NUP188-211ENST00000550219 DNAJC21Q5F1R6 531 aaKnown RBP13.11□□□□□ -0.31
NUP188-211ENST00000550219 COLEC12Q5KU26 742 aa13.11□□□□□ -0.31
NUP188-211ENST00000550219 GPRC6AQ5T6X5 926 aa13.11□□□□□ -0.31
NUP188-211ENST00000550219 AGAP9Q5VTM2 703 aa13.11□□□□□ -0.31
NUP188-211ENST00000550219 C6orf15Q6UXA7 325 aaPredicted RBP13.11□□□□□ -0.31
NUP188-211ENST00000550219 PRSS42Q7Z5A4 293 aa13.11□□□□□ -0.31
NUP188-211ENST00000550219 AMZ2Q86W34 360 aa13.11□□□□□ -0.31
NUP188-211ENST00000550219 PDIK1LQ8N165 341 aa13.11□□□□□ -0.31
NUP188-211ENST00000550219 RASGEF1AQ8N9B8 481 aa13.11□□□□□ -0.31
NUP188-211ENST00000550219 NAT14Q8WUY8 206 aa13.11□□□□□ -0.31
NUP188-211ENST00000550219 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.11□□□□□ -0.31
NUP188-211ENST00000550219 LRRC39Q96DD0 335 aa13.11□□□□□ -0.31
NUP188-211ENST00000550219 PWWP2AQ96N64 755 aa13.11□□□□□ -0.31
NUP188-211ENST00000550219 C19orf43Q9BQ61 176 aa13.11□□□□□ -0.31
NUP188-211ENST00000550219 PARD6BQ9BYG5 372 aa13.11□□□□□ -0.31
NUP188-211ENST00000550219 SLC40A1Q9NP59 571 aa13.11□□□□□ -0.31
NUP188-211ENST00000550219 IMP3Q9NV31 184 aaKnown RBP13.11□□□□□ -0.31
NUP188-211ENST00000550219 PIH1D1Q9NWS0 290 aaKnown RBP13.11□□□□□ -0.31
NUP188-211ENST00000550219 RIMKLBQ9ULI2 386 aa13.11□□□□□ -0.31
NUP188-211ENST00000550219 NFU1Q9UMS0 254 aa13.11□□□□□ -0.31
NUP188-211ENST00000550219 CFAP20Q9Y6A4 193 aaKnown RBP13.11□□□□□ -0.31
NUP188-211ENST00000550219 PIEZO2Q9H5I5 2752 aa13.11□□□□□ -0.31
NUP188-211ENST00000550219 MAGEB16A2A368 324 aa13.1□□□□□ -0.31
NUP188-211ENST00000550219 MROH6A6NGR9 719 aa13.1□□□□□ -0.31
NUP188-211ENST00000550219 LDB2O43679 373 aa13.1□□□□□ -0.31
NUP188-211ENST00000550219 KATNA1O75449 491 aa13.1□□□□□ -0.31
NUP188-211ENST00000550219 POP7O75817 140 aaKnown RBP13.1□□□□□ -0.31
NUP188-211ENST00000550219 F8A1P23610 371 aa13.1□□□□□ -0.31
NUP188-211ENST00000550219 ADRA1DP25100 572 aa13.1□□□□□ -0.31
NUP188-211ENST00000550219 MCM3P25205 808 aa13.1□□□□□ -0.31
NUP188-211ENST00000550219 MGAT1P26572 445 aa13.1□□□□□ -0.31
NUP188-211ENST00000550219 VSNL1P62760 191 aa13.1□□□□□ -0.31
NUP188-211ENST00000550219 MC1RQ01726 317 aa13.1□□□□□ -0.31
NUP188-211ENST00000550219 DHX9Q08211 1270 aaKnown RBP13.1□□□□□ -0.31
NUP188-211ENST00000550219 ITGA9Q13797 1035 aa13.1□□□□□ -0.31
NUP188-211ENST00000550219 MAP7Q14244 749 aa13.1□□□□□ -0.31
NUP188-211ENST00000550219 KCNAB1Q14722 419 aa13.1□□□□□ -0.31
NUP188-211ENST00000550219 TAF1AQ15573 450 aaPredicted RBP13.1□□□□□ -0.31
NUP188-211ENST00000550219 PCID2Q5JVF3 399 aa13.1□□□□□ -0.31
NUP188-211ENST00000550219 LDLRAP1Q5SW96 308 aa13.1□□□□□ -0.31
NUP188-211ENST00000550219 ZDHHC20Q5W0Z9 365 aa13.1□□□□□ -0.31
NUP188-211ENST00000550219 DUS1LQ6P1R4 473 aaKnown RBP13.1□□□□□ -0.31
NUP188-211ENST00000550219 TMEM220Q6QAJ8 160 aa13.1□□□□□ -0.31
NUP188-211ENST00000550219 WASH2PQ6VEQ5 465 aa13.1□□□□□ -0.31
NUP188-211ENST00000550219 FAM83HQ6ZRV2 1179 aaPredicted RBP13.1□□□□□ -0.31
NUP188-211ENST00000550219 RELL1Q8IUW5 271 aa13.1□□□□□ -0.31
NUP188-211ENST00000550219 RBM12BQ8IXT5 1001 aaKnown RBP13.1□□□□□ -0.31
NUP188-211ENST00000550219 MPP5Q8N3R9 675 aa13.1□□□□□ -0.31
NUP188-211ENST00000550219 BEND7Q8N7W2 519 aaPredicted RBP13.1□□□□□ -0.31
NUP188-211ENST00000550219 DDHD1Q8NEL9 900 aa13.1□□□□□ -0.31
NUP188-211ENST00000550219 ZDHHC12Q96GR4 267 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms