RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 CAPN1P07384 714 aa22.72■■□□□ 1.23
NPAS3-206ENST00000548645 PIRTP0C851 137 aa22.72■■□□□ 1.23
NPAS3-206ENST00000548645 PFKLP17858 780 aa22.72■■□□□ 1.23
NPAS3-206ENST00000548645 GALNT3Q14435 633 aa22.72■■□□□ 1.23
NPAS3-206ENST00000548645 PLA2G4EQ3MJ16 856 aa22.72■■□□□ 1.23
NPAS3-206ENST00000548645 LETMD1Q6P1Q0 360 aa22.72■■□□□ 1.23
NPAS3-206ENST00000548645 NANOGNBQ7Z5D8 188 aa22.72■■□□□ 1.23
NPAS3-206ENST00000548645 ZHX1-C8orf76Q96EF9 292 aa22.72■■□□□ 1.23
NPAS3-206ENST00000548645 SERPINB11Q96P15 392 aa22.72■■□□□ 1.23
NPAS3-206ENST00000548645 ASNA1O43681 348 aa22.72■■□□□ 1.23
NPAS3-206ENST00000548645 MASP1P48740 699 aa22.72■■□□□ 1.23
NPAS3-206ENST00000548645 HTR6P50406 440 aa22.72■■□□□ 1.23
NPAS3-206ENST00000548645 KIAA0040Q15053 153 aa22.72■■□□□ 1.23
NPAS3-206ENST00000548645 MAPKAPK3Q16644 382 aa22.72■■□□□ 1.23
NPAS3-206ENST00000548645 ZNF181Q2M3W8 571 aa22.72■■□□□ 1.23
NPAS3-206ENST00000548645 GPR149Q86SP6 731 aa22.72■■□□□ 1.23
NPAS3-206ENST00000548645 MICU2Q8IYU8 434 aa22.72■■□□□ 1.23
NPAS3-206ENST00000548645 GTF2H4Q92759 462 aa22.72■■□□□ 1.23
NPAS3-206ENST00000548645 POP5Q969H6 163 aaKnown RBP22.72■■□□□ 1.23
NPAS3-206ENST00000548645 HOXD1Q9GZZ0 328 aa22.72■■□□□ 1.23
NPAS3-206ENST00000548645 CCNB1IP1Q9NPC3 277 aa22.72■■□□□ 1.23
NPAS3-206ENST00000548645 TMEM248Q9NWD8 314 aa22.72■■□□□ 1.23
NPAS3-206ENST00000548645 ASB1Q9Y576 335 aa22.72■■□□□ 1.23
NPAS3-206ENST00000548645 RGS10O43665 173 aa22.71■■□□□ 1.23
NPAS3-206ENST00000548645 RFPL2O75678 378 aa22.71■■□□□ 1.23
NPAS3-206ENST00000548645 EPOP01588 193 aa22.71■■□□□ 1.23
NPAS3-206ENST00000548645 MT-ND2P03891 347 aa22.71■■□□□ 1.23
NPAS3-206ENST00000548645 HK3P52790 923 aa22.71■■□□□ 1.23
NPAS3-206ENST00000548645 AAK1Q2M2I8 961 aa22.71■■□□□ 1.23
NPAS3-206ENST00000548645 PLEKHG6Q3KR16 790 aa22.71■■□□□ 1.23
NPAS3-206ENST00000548645 TUBA3EQ6PEY2 450 aa22.71■■□□□ 1.23
NPAS3-206ENST00000548645 DET1Q7L5Y6 550 aa22.71■■□□□ 1.23
NPAS3-206ENST00000548645 POLR1EQ9GZS1 481 aaKnown RBP22.71■■□□□ 1.23
NPAS3-206ENST00000548645 FBXO10Q9UK96 956 aa22.71■■□□□ 1.23
NPAS3-206ENST00000548645 INVSQ9Y283 1065 aa22.71■■□□□ 1.23
NPAS3-206ENST00000548645 TESMINQ9Y4I5 508 aa22.71■■□□□ 1.23
NPAS3-206ENST00000548645 UGT2A1Q9Y4X1 527 aa22.71■■□□□ 1.23
NPAS3-206ENST00000548645 POLR2AP24928 1970 aaKnown RBP22.71■■□□□ 1.23
NPAS3-206ENST00000548645 MEIS3P2A8K0S8 358 aa22.71■■□□□ 1.23
NPAS3-206ENST00000548645 A8MU76 341 aa22.71■■□□□ 1.23
NPAS3-206ENST00000548645 VPS26AO75436 327 aa22.71■■□□□ 1.23
NPAS3-206ENST00000548645 PGFP49763 221 aa22.71■■□□□ 1.23
NPAS3-206ENST00000548645 FADDQ13158 208 aa22.71■■□□□ 1.23
NPAS3-206ENST00000548645 TIGD5Q53EQ6 642 aa22.71■■□□□ 1.23
NPAS3-206ENST00000548645 HBEGFQ99075 208 aa22.71■■□□□ 1.23
NPAS3-206ENST00000548645 IKZF5Q9H5V7 419 aa22.71■■□□□ 1.23
NPAS3-206ENST00000548645 PRDM5Q9NQX1 630 aaPredicted RBP22.71■■□□□ 1.23
NPAS3-206ENST00000548645 TMLHEQ9NVH6 421 aa22.71■■□□□ 1.23
NPAS3-206ENST00000548645 TAF4O00268 1085 aa22.71■■□□□ 1.23
NPAS3-206ENST00000548645 MRPS14O60783 128 aaKnown RBP22.71■■□□□ 1.23
NPAS3-206ENST00000548645 CREG1O75629 220 aa22.71■■□□□ 1.23
NPAS3-206ENST00000548645 FADS2O95864 444 aaKnown RBP22.71■■□□□ 1.23
NPAS3-206ENST00000548645 PBX3P40426 434 aa22.71■■□□□ 1.23
NPAS3-206ENST00000548645 NRIP1P48552 1158 aa22.71■■□□□ 1.23
NPAS3-206ENST00000548645 CRYBB1P53674 252 aaPredicted RBP22.71■■□□□ 1.23
NPAS3-206ENST00000548645 KEAP1Q14145 624 aa22.71■■□□□ 1.23
NPAS3-206ENST00000548645 RFTN2Q52LD8 501 aaPredicted RBP22.71■■□□□ 1.23
NPAS3-206ENST00000548645 VARS2Q5ST30 1063 aaKnown RBP22.71■■□□□ 1.23
NPAS3-206ENST00000548645 GALNT5Q7Z7M9 940 aa22.71■■□□□ 1.23
NPAS3-206ENST00000548645 METTL23Q86XA0 190 aa22.71■■□□□ 1.23
NPAS3-206ENST00000548645 ZNF540Q8NDQ6 660 aa22.71■■□□□ 1.23
NPAS3-206ENST00000548645 ITCHQ96J02 903 aa22.71■■□□□ 1.23
NPAS3-206ENST00000548645 GAD1Q99259 594 aa22.71■■□□□ 1.23
NPAS3-206ENST00000548645 ACOT13Q9NPJ3 140 aa22.71■■□□□ 1.23
NPAS3-206ENST00000548645 KCNH4Q9UQ05 1017 aa22.71■■□□□ 1.23
NPAS3-206ENST00000548645 PSMD11O00231 422 aa22.7■■□□□ 1.22
NPAS3-206ENST00000548645 MITFO75030 526 aaPredicted RBP22.7■■□□□ 1.22
NPAS3-206ENST00000548645 RECQL5O94762 991 aaPredicted RBP22.7■■□□□ 1.22
NPAS3-206ENST00000548645 ODC1P11926 461 aa22.7■■□□□ 1.22
NPAS3-206ENST00000548645 TCEA1P23193 301 aaKnown RBP22.7■■□□□ 1.22
NPAS3-206ENST00000548645 SIM2Q14190 667 aaPredicted RBP22.7■■□□□ 1.22
NPAS3-206ENST00000548645 PTPRNQ16849 979 aa22.7■■□□□ 1.22
NPAS3-206ENST00000548645 SCD5Q86SK9 330 aa22.7■■□□□ 1.22
NPAS3-206ENST00000548645 POC5Q8NA72 575 aa22.7■■□□□ 1.22
NPAS3-206ENST00000548645 MMP27Q9H306 513 aa22.7■■□□□ 1.22
NPAS3-206ENST00000548645 RIBC2Q9H4K1 309 aa22.7■■□□□ 1.22
NPAS3-206ENST00000548645 SLCO3A1Q9UIG8 710 aa22.7■■□□□ 1.22
NPAS3-206ENST00000548645 TRMT6Q9UJA5 497 aaKnown RBP22.7■■□□□ 1.22
NPAS3-206ENST00000548645 ERVW-1Q9UQF0 538 aa22.7■■□□□ 1.22
NPAS3-206ENST00000548645 CLDN24A6NM45 220 aa22.7■■□□□ 1.22
NPAS3-206ENST00000548645 DLGAP3O95886 979 aa22.7■■□□□ 1.22
NPAS3-206ENST00000548645 FCGRTP55899 365 aa22.7■■□□□ 1.22
NPAS3-206ENST00000548645 CAPN13Q6MZZ7 669 aaPredicted RBP22.7■■□□□ 1.22
NPAS3-206ENST00000548645 SHQ1Q6PI26 577 aaKnown RBP22.7■■□□□ 1.22
NPAS3-206ENST00000548645 PPP3R2Q96LZ3 170 aa22.7■■□□□ 1.22
NPAS3-206ENST00000548645 EFCAB9A8MZ26 197 aa22.69■■□□□ 1.22
NPAS3-206ENST00000548645 IL1RNP18510 177 aa22.69■■□□□ 1.22
NPAS3-206ENST00000548645 SCNN1GP51170 649 aa22.69■■□□□ 1.22
NPAS3-206ENST00000548645 IL2P60568 153 aa22.69■■□□□ 1.22
NPAS3-206ENST00000548645 TUBA1BP68363 451 aa22.69■■□□□ 1.22
NPAS3-206ENST00000548645 IL10RBQ08334 325 aa22.69■■□□□ 1.22
NPAS3-206ENST00000548645 LRIT3Q3SXY7 679 aa22.69■■□□□ 1.22
NPAS3-206ENST00000548645 AFTPHQ6ULP2 937 aa22.69■■□□□ 1.22
NPAS3-206ENST00000548645 TUBA1AQ71U36 451 aa22.69■■□□□ 1.22
NPAS3-206ENST00000548645 DPP9Q86TI2 863 aa22.69■■□□□ 1.22
NPAS3-206ENST00000548645 MMAAQ8IVH4 418 aaKnown RBP22.69■■□□□ 1.22
NPAS3-206ENST00000548645 RPL3LQ92901 407 aaKnown RBP22.69■■□□□ 1.22
NPAS3-206ENST00000548645 YME1L1Q96TA2 773 aa22.69■■□□□ 1.22
NPAS3-206ENST00000548645 APOL4Q9BPW4 351 aa22.69■■□□□ 1.22
NPAS3-206ENST00000548645 NLE1Q9NVX2 485 aaPredicted RBP22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms