RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 CDKL2Q92772 493 aa14.11□□□□□ -0.15
DDX54-203ENST00000546869 LIN37Q96GY3 246 aaPredicted RBP14.11□□□□□ -0.15
DDX54-203ENST00000546869 AHCYL2Q96HN2 611 aaKnown RBP14.11□□□□□ -0.15
DDX54-203ENST00000546869 MCMBPQ9BTE3 642 aa14.11□□□□□ -0.15
DDX54-203ENST00000546869 NRSN2Q9GZP1 204 aa14.11□□□□□ -0.15
DDX54-203ENST00000546869 DHRS7Q9Y394 339 aa14.11□□□□□ -0.15
DDX54-203ENST00000546869 ENTPD2Q9Y5L3 495 aa14.11□□□□□ -0.15
DDX54-203ENST00000546869 PRAMEF33A0A0G2JMD5 474 aa14.1□□□□□ -0.15
DDX54-203ENST00000546869 TCRBV9S1A1TA0A576 114 aa14.1□□□□□ -0.15
DDX54-203ENST00000546869 FAM159BA6NKW6 160 aa14.1□□□□□ -0.15
DDX54-203ENST00000546869 CASC3O15234 703 aaKnown RBP14.1□□□□□ -0.15
DDX54-203ENST00000546869 TOX3O15405 576 aaPredicted RBP14.1□□□□□ -0.15
DDX54-203ENST00000546869 CSO75390 466 aaKnown RBP14.1□□□□□ -0.15
DDX54-203ENST00000546869 MATN4O95460 622 aa14.1□□□□□ -0.15
DDX54-203ENST00000546869 C1QAP02745 245 aa14.1□□□□□ -0.15
DDX54-203ENST00000546869 C9P02748 559 aa14.1□□□□□ -0.15
DDX54-203ENST00000546869 RPN2P04844 631 aa14.1□□□□□ -0.15
DDX54-203ENST00000546869 CBSLP0DN79 551 aa14.1□□□□□ -0.15
DDX54-203ENST00000546869 ITGB6P18564 788 aa14.1□□□□□ -0.15
DDX54-203ENST00000546869 CBSP35520 551 aa14.1□□□□□ -0.15
DDX54-203ENST00000546869 INHBCP55103 352 aa14.1□□□□□ -0.15
DDX54-203ENST00000546869 EIF3IQ13347 325 aaKnown RBP14.1□□□□□ -0.15
DDX54-203ENST00000546869 BRD3Q15059 726 aa14.1□□□□□ -0.15
DDX54-203ENST00000546869 TTLL9Q3SXZ7 439 aa14.1□□□□□ -0.15
DDX54-203ENST00000546869 AMZ1Q400G9 498 aa14.1□□□□□ -0.15
DDX54-203ENST00000546869 NAPRTQ6XQN6 538 aa14.1□□□□□ -0.15
DDX54-203ENST00000546869 ZNF574Q6ZN55 896 aaPredicted RBP14.1□□□□□ -0.15
DDX54-203ENST00000546869 USP53Q70EK8 1073 aa14.1□□□□□ -0.15
DDX54-203ENST00000546869 CCDC25Q86WR0 208 aa14.1□□□□□ -0.15
DDX54-203ENST00000546869 PLXDC1Q8IUK5 500 aa14.1□□□□□ -0.15
DDX54-203ENST00000546869 VRK3Q8IV63 474 aa14.1□□□□□ -0.15
DDX54-203ENST00000546869 ZBTB2Q8N680 514 aa14.1□□□□□ -0.15
DDX54-203ENST00000546869 INPP5DQ92835 1189 aa14.1□□□□□ -0.15
DDX54-203ENST00000546869 C9orf72Q96LT7 481 aa14.1□□□□□ -0.15
DDX54-203ENST00000546869 FERD3LQ96RJ6 166 aa14.1□□□□□ -0.15
DDX54-203ENST00000546869 FMO2Q99518 471 aa14.1□□□□□ -0.15
DDX54-203ENST00000546869 TBC1D10AQ9BXI6 508 aa14.1□□□□□ -0.15
DDX54-203ENST00000546869 FUT8Q9BYC5 575 aa14.1□□□□□ -0.15
DDX54-203ENST00000546869 TRIT1Q9H3H1 467 aaKnown RBP14.1□□□□□ -0.15
DDX54-203ENST00000546869 OGFRQ9NZT2 677 aa14.1□□□□□ -0.15
DDX54-203ENST00000546869 ATXN7L1Q9ULK2 861 aaPredicted RBP14.1□□□□□ -0.15
DDX54-203ENST00000546869 ASF1AQ9Y294 204 aa14.1□□□□□ -0.15
DDX54-203ENST00000546869 CFAP20Q9Y6A4 193 aaKnown RBP14.1□□□□□ -0.15
DDX54-203ENST00000546869 RP1P56715 2156 aa14.1□□□□□ -0.15
DDX54-203ENST00000546869 NCOR2Q9Y618 2525 aa14.09□□□□□ -0.15
DDX54-203ENST00000546869 HGSO14964 777 aaPredicted RBP14.09□□□□□ -0.15
DDX54-203ENST00000546869 KDM1AO60341 852 aa14.09□□□□□ -0.15
DDX54-203ENST00000546869 VPS26AO75436 327 aa14.09□□□□□ -0.15
DDX54-203ENST00000546869 PROS1P07225 676 aa14.09□□□□□ -0.15
DDX54-203ENST00000546869 ENO3P13929 434 aaPredicted RBP14.09□□□□□ -0.15
DDX54-203ENST00000546869 AMD1P17707 334 aa14.09□□□□□ -0.15
DDX54-203ENST00000546869 STX2P32856 288 aa14.09□□□□□ -0.15
DDX54-203ENST00000546869 MAPK9P45984 424 aa14.09□□□□□ -0.15
DDX54-203ENST00000546869 CAPZBP47756 277 aa14.09□□□□□ -0.15
DDX54-203ENST00000546869 CLDN6P56747 220 aa14.09□□□□□ -0.15
DDX54-203ENST00000546869 TIAL1Q01085 375 aaKnown RBP eCLIP14.09□□□□□ -0.15
DDX54-203ENST00000546869 NAB1Q13506 487 aa14.09□□□□□ -0.15
DDX54-203ENST00000546869 KRT33BQ14525 404 aa14.09□□□□□ -0.15
DDX54-203ENST00000546869 SLMAPQ14BN4 828 aa14.09□□□□□ -0.15
DDX54-203ENST00000546869 RTP5Q14D33 572 aa14.09□□□□□ -0.15
DDX54-203ENST00000546869 NKAIN2Q5VXU1 208 aa14.09□□□□□ -0.15
DDX54-203ENST00000546869 LRRC8EQ6NSJ5 796 aa14.09□□□□□ -0.15
DDX54-203ENST00000546869 IGF2-ASQ6U949 168 aa14.09□□□□□ -0.15
DDX54-203ENST00000546869 TMPRSS9Q7Z410 1059 aa14.09□□□□□ -0.15
DDX54-203ENST00000546869 ZNF761Q86XN6 746 aaPredicted RBP14.09□□□□□ -0.15
DDX54-203ENST00000546869 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.09□□□□□ -0.15
DDX54-203ENST00000546869 NUDT22Q9BRQ3 303 aa14.09□□□□□ -0.15
DDX54-203ENST00000546869 STRADBQ9C0K7 418 aa14.09□□□□□ -0.15
DDX54-203ENST00000546869 TWSG1Q9GZX9 223 aa14.09□□□□□ -0.15
DDX54-203ENST00000546869 RDH14Q9HBH5 336 aa14.09□□□□□ -0.15
DDX54-203ENST00000546869 SMYD2Q9NRG4 433 aa14.09□□□□□ -0.15
DDX54-203ENST00000546869 TAS2R13Q9NYV9 303 aa14.09□□□□□ -0.15
DDX54-203ENST00000546869 GALPQ9UBC7 116 aa14.09□□□□□ -0.15
DDX54-203ENST00000546869 VWA7Q9Y334 891 aa14.09□□□□□ -0.15
DDX54-203ENST00000546869 PIKFYVEQ9Y2I7 2098 aa14.09□□□□□ -0.15
DDX54-203ENST00000546869 MN1Q10571 1320 aaPredicted RBP14.09□□□□□ -0.15
DDX54-203ENST00000546869 COL27A1Q8IZC6 1860 aaPredicted RBP14.08□□□□□ -0.16
DDX54-203ENST00000546869 IGHV5-10-1A0A0J9YXX1 117 aa14.08□□□□□ -0.16
DDX54-203ENST00000546869 FAM149AA5PLN7 773 aa14.08□□□□□ -0.16
DDX54-203ENST00000546869 MATN2O00339 956 aa14.08□□□□□ -0.16
DDX54-203ENST00000546869 ANKRD34CP0C6C1 535 aa14.08□□□□□ -0.16
DDX54-203ENST00000546869 RHOXF2BP0C7M4 288 aa14.08□□□□□ -0.16
DDX54-203ENST00000546869 THRAP10827 490 aa14.08□□□□□ -0.16
DDX54-203ENST00000546869 HOXB3P14651 431 aaPredicted RBP14.08□□□□□ -0.16
DDX54-203ENST00000546869 SPINK2P20155 84 aa14.08□□□□□ -0.16
DDX54-203ENST00000546869 CSF2RBP32927 897 aa14.08□□□□□ -0.16
DDX54-203ENST00000546869 CCNFP41002 786 aa14.08□□□□□ -0.16
DDX54-203ENST00000546869 CSE1LP55060 971 aaKnown RBP14.08□□□□□ -0.16
DDX54-203ENST00000546869 KYNUQ16719 465 aa14.08□□□□□ -0.16
DDX54-203ENST00000546869 MAP9Q49MG5 647 aa14.08□□□□□ -0.16
DDX54-203ENST00000546869 FAM45BPQ6NSW5 357 aa14.08□□□□□ -0.16
DDX54-203ENST00000546869 DUS1LQ6P1R4 473 aaKnown RBP14.08□□□□□ -0.16
DDX54-203ENST00000546869 ARHGAP22Q7Z5H3 698 aa14.08□□□□□ -0.16
DDX54-203ENST00000546869 STRA8Q7Z7C7 330 aa14.08□□□□□ -0.16
DDX54-203ENST00000546869 ZC3HC1Q86WB0 502 aaKnown RBP14.08□□□□□ -0.16
DDX54-203ENST00000546869 CARFQ8N187 725 aa14.08□□□□□ -0.16
DDX54-203ENST00000546869 LRRN4CLQ8ND94 238 aa14.08□□□□□ -0.16
DDX54-203ENST00000546869 PHC3Q8NDX5 983 aa14.08□□□□□ -0.16
DDX54-203ENST00000546869 OR52E1Q8NGJ3 308 aa14.08□□□□□ -0.16
DDX54-203ENST00000546869 WDR36Q8NI36 951 aaKnown RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms