RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 THRAP10827 490 aa7.55□□□□□ -1.2
SNHG1-223ENST00000545440 CD82P27701 267 aa7.55□□□□□ -1.2
SNHG1-223ENST00000545440 PSMB4P28070 264 aa7.55□□□□□ -1.2
SNHG1-223ENST00000545440 CD1CP29017 333 aa7.55□□□□□ -1.2
SNHG1-223ENST00000545440 ALDH4A1P30038 563 aa7.55□□□□□ -1.2
SNHG1-223ENST00000545440 ADRA1AP35348 466 aa7.55□□□□□ -1.2
SNHG1-223ENST00000545440 LIMK2P53671 638 aa7.55□□□□□ -1.2
SNHG1-223ENST00000545440 PDE1BQ01064 536 aa7.55□□□□□ -1.2
SNHG1-223ENST00000545440 GTF2H3Q13889 308 aa7.55□□□□□ -1.2
SNHG1-223ENST00000545440 DOC2BQ14184 412 aa7.55□□□□□ -1.2
SNHG1-223ENST00000545440 PRPSAP1Q14558 356 aa7.55□□□□□ -1.2
SNHG1-223ENST00000545440 TAF1AQ15573 450 aaPredicted RBP7.55□□□□□ -1.2
SNHG1-223ENST00000545440 INSCQ1MX18 579 aa7.55□□□□□ -1.2
SNHG1-223ENST00000545440 P3H1Q32P28 736 aa7.55□□□□□ -1.2
SNHG1-223ENST00000545440 AMZ1Q400G9 498 aa7.55□□□□□ -1.2
SNHG1-223ENST00000545440 ATP13A5Q4VNC0 1218 aa7.55□□□□□ -1.2
SNHG1-223ENST00000545440 KHDC1Q4VXA5 237 aaKnown RBP7.55□□□□□ -1.2
SNHG1-223ENST00000545440 PHF19Q5T6S3 580 aa7.55□□□□□ -1.2
SNHG1-223ENST00000545440 AADACL2Q6P093 401 aa7.55□□□□□ -1.2
SNHG1-223ENST00000545440 IYDQ6PHW0 289 aa7.55□□□□□ -1.2
SNHG1-223ENST00000545440 DARS2Q6PI48 645 aaKnown RBP7.55□□□□□ -1.2
SNHG1-223ENST00000545440 POMZP3Q6PJE2 187 aa7.55□□□□□ -1.2
SNHG1-223ENST00000545440 CRTC3Q6UUV7 619 aa7.55□□□□□ -1.2
SNHG1-223ENST00000545440 FAM151BQ6UXP7 276 aa7.55□□□□□ -1.2
SNHG1-223ENST00000545440 RANBP10Q6VN20 620 aa7.55□□□□□ -1.2
SNHG1-223ENST00000545440 SLC9B2Q86UD5 537 aa7.55□□□□□ -1.2
SNHG1-223ENST00000545440 ZNF547Q8IVP9 402 aa7.55□□□□□ -1.2
SNHG1-223ENST00000545440 CCDC112Q8NEF3 446 aa7.55□□□□□ -1.2
SNHG1-223ENST00000545440 DDHD1Q8NEL9 900 aa7.55□□□□□ -1.2
SNHG1-223ENST00000545440 OR10G6Q8NH81 332 aa7.55□□□□□ -1.2
SNHG1-223ENST00000545440 CCDC110Q8TBZ0 833 aa7.55□□□□□ -1.2
SNHG1-223ENST00000545440 BRSK1Q8TDC3 778 aa7.55□□□□□ -1.2
SNHG1-223ENST00000545440 SH3KBP1Q96B97 665 aa7.55□□□□□ -1.2
SNHG1-223ENST00000545440 LRRC45Q96CN5 670 aa7.55□□□□□ -1.2
SNHG1-223ENST00000545440 HES6Q96HZ4 224 aa7.55□□□□□ -1.2
SNHG1-223ENST00000545440 SLC38A3Q99624 504 aa7.55□□□□□ -1.2
SNHG1-223ENST00000545440 NUDT22Q9BRQ3 303 aa7.55□□□□□ -1.2
SNHG1-223ENST00000545440 FICDQ9BVA6 458 aa7.55□□□□□ -1.2
SNHG1-223ENST00000545440 OSGEPL1Q9H4B0 414 aa7.55□□□□□ -1.2
SNHG1-223ENST00000545440 EPB41L1Q9H4G0 881 aa7.55□□□□□ -1.2
SNHG1-223ENST00000545440 UCK1Q9HA47 277 aa7.55□□□□□ -1.2
SNHG1-223ENST00000545440 BPIFA1Q9NP55 256 aa7.55□□□□□ -1.2
SNHG1-223ENST00000545440 IL26Q9NPH9 171 aa7.55□□□□□ -1.2
SNHG1-223ENST00000545440 AKAP7Q9P0M2 348 aaPredicted RBP7.55□□□□□ -1.2
SNHG1-223ENST00000545440 PISDQ9UG56 409 aa7.55□□□□□ -1.2
SNHG1-223ENST00000545440 FEZ2Q9UHY8 353 aaPredicted RBP7.55□□□□□ -1.2
SNHG1-223ENST00000545440 TMPRSS11EQ9UL52 423 aa7.55□□□□□ -1.2
SNHG1-223ENST00000545440 PACSIN2Q9UNF0 486 aaPredicted RBP7.55□□□□□ -1.2
SNHG1-223ENST00000545440 A0A0U1RQJ8 604 aa7.54□□□□□ -1.2
SNHG1-223ENST00000545440 TEX51A0A1B0GUA7 166 aa7.54□□□□□ -1.2
SNHG1-223ENST00000545440 C5orf60A6NFR6 353 aa7.54□□□□□ -1.2
SNHG1-223ENST00000545440 C2orf81A6NN90 581 aa7.54□□□□□ -1.2
SNHG1-223ENST00000545440 GAPDHSO14556 408 aaPredicted RBP7.54□□□□□ -1.2
SNHG1-223ENST00000545440 ARHGAP6O43182 974 aa7.54□□□□□ -1.2
SNHG1-223ENST00000545440 KLK10O43240 276 aa7.54□□□□□ -1.2
SNHG1-223ENST00000545440 KRT86O43790 486 aa7.54□□□□□ -1.2
SNHG1-223ENST00000545440 SNX2O60749 519 aa7.54□□□□□ -1.2
SNHG1-223ENST00000545440 KCNJ13O60928 360 aa7.54□□□□□ -1.2
SNHG1-223ENST00000545440 MTX2O75431 263 aa7.54□□□□□ -1.2
SNHG1-223ENST00000545440 CDK14O94921 469 aa7.54□□□□□ -1.2
SNHG1-223ENST00000545440 PRAMEF1O95521 474 aa7.54□□□□□ -1.2
SNHG1-223ENST00000545440 CRTAMO95727 393 aa7.54□□□□□ -1.2
SNHG1-223ENST00000545440 AGTP01019 485 aa7.54□□□□□ -1.2
SNHG1-223ENST00000545440 LIPCP11150 499 aa7.54□□□□□ -1.2
SNHG1-223ENST00000545440 HGFP14210 728 aa7.54□□□□□ -1.2
SNHG1-223ENST00000545440 ZNF7P17097 686 aaPredicted RBP7.54□□□□□ -1.2
SNHG1-223ENST00000545440 VCLP18206 1134 aa7.54□□□□□ -1.2
SNHG1-223ENST00000545440 ITIH1P19827 911 aa7.54□□□□□ -1.2
SNHG1-223ENST00000545440 FSTP19883 344 aa7.54□□□□□ -1.2
SNHG1-223ENST00000545440 LPOP22079 712 aaPredicted RBP7.54□□□□□ -1.2
SNHG1-223ENST00000545440 SLC5A2P31639 672 aa7.54□□□□□ -1.2
SNHG1-223ENST00000545440 UBE2IP63279 158 aaKnown RBP7.54□□□□□ -1.2
SNHG1-223ENST00000545440 DMPKQ09013 629 aa7.54□□□□□ -1.2
SNHG1-223ENST00000545440 C16orf72Q14CZ0 275 aa7.54□□□□□ -1.2
SNHG1-223ENST00000545440 LDLRAP1Q5SW96 308 aa7.54□□□□□ -1.2
SNHG1-223ENST00000545440 ZNF648Q5T619 568 aaPredicted RBP7.54□□□□□ -1.2
SNHG1-223ENST00000545440 AGAP9Q5VTM2 703 aa7.54□□□□□ -1.2
SNHG1-223ENST00000545440 TMEM71Q6P5X7 295 aa7.54□□□□□ -1.2
SNHG1-223ENST00000545440 WDR74Q6RFH5 385 aaPredicted RBP7.54□□□□□ -1.2
SNHG1-223ENST00000545440 WASH2PQ6VEQ5 465 aa7.54□□□□□ -1.2
SNHG1-223ENST00000545440 ZNF574Q6ZN55 896 aaPredicted RBP7.54□□□□□ -1.2
SNHG1-223ENST00000545440 ARHGEF18Q6ZSZ5 1173 aa7.54□□□□□ -1.2
SNHG1-223ENST00000545440 GPR155Q7Z3F1 870 aa7.54□□□□□ -1.2
SNHG1-223ENST00000545440 C11orf96Q7Z7L8 435 aa7.54□□□□□ -1.2
SNHG1-223ENST00000545440 ZNF761Q86XN6 746 aaPredicted RBP7.54□□□□□ -1.2
SNHG1-223ENST00000545440 JAMLQ86YT9 394 aa7.54□□□□□ -1.2
SNHG1-223ENST00000545440 TRAPPC5Q8IUR0 188 aa7.54□□□□□ -1.2
SNHG1-223ENST00000545440 MFSD4AQ8N468 514 aa7.54□□□□□ -1.2
SNHG1-223ENST00000545440 AGBL5Q8NDL9 886 aa7.54□□□□□ -1.2
SNHG1-223ENST00000545440 SLC35B2Q8TB61 432 aa7.54□□□□□ -1.2
SNHG1-223ENST00000545440 PIWIL2Q8TC59 973 aaKnown RBP7.54□□□□□ -1.2
SNHG1-223ENST00000545440 SNRNP27Q8WVK2 155 aaKnown RBP7.54□□□□□ -1.2
SNHG1-223ENST00000545440 AHCYL2Q96HN2 611 aaKnown RBP7.54□□□□□ -1.2
SNHG1-223ENST00000545440 NAF1Q96HR8 494 aaKnown RBP7.54□□□□□ -1.2
SNHG1-223ENST00000545440 ZNF514Q96K75 400 aaPredicted RBP7.54□□□□□ -1.2
SNHG1-223ENST00000545440 FAM118BQ9BPY3 351 aa7.54□□□□□ -1.2
SNHG1-223ENST00000545440 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.54□□□□□ -1.2
SNHG1-223ENST00000545440 TRIT1Q9H3H1 467 aaKnown RBP7.54□□□□□ -1.2
SNHG1-223ENST00000545440 C10orf88Q9H8K7 445 aa7.54□□□□□ -1.2
SNHG1-223ENST00000545440 ARNT2Q9HBZ2 717 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms