RNA–Protein interactions for RNA: ENST00000544652.1

DDX11-227, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-227ENST00000544652 CD59P13987 128 aa12.79□□□□□ -0.36
DDX11-227ENST00000544652 SLC2A4P14672 509 aa12.79□□□□□ -0.36
DDX11-227ENST00000544652 XRCC1P18887 633 aaPredicted RBP12.79□□□□□ -0.36
DDX11-227ENST00000544652 SAT1P21673 171 aa12.79□□□□□ -0.36
DDX11-227ENST00000544652 RPL10P27635 214 aaKnown RBP12.79□□□□□ -0.36
DDX11-227ENST00000544652 CRABP2P29373 138 aa12.79□□□□□ -0.36
DDX11-227ENST00000544652 SLC26A3P40879 764 aa12.79□□□□□ -0.36
DDX11-227ENST00000544652 SLCO1A2P46721 670 aa12.79□□□□□ -0.36
DDX11-227ENST00000544652 LIMK1P53667 647 aa12.79□□□□□ -0.36
DDX11-227ENST00000544652 ZNF460Q14592 562 aa12.79□□□□□ -0.36
DDX11-227ENST00000544652 KIR2DS5Q14953 304 aa12.79□□□□□ -0.36
DDX11-227ENST00000544652 SUZ12Q15022 739 aaKnown RBP12.79□□□□□ -0.36
DDX11-227ENST00000544652 DEFB133Q30KQ1 61 aa12.79□□□□□ -0.36
DDX11-227ENST00000544652 AASDHQ4L235 1098 aaPredicted RBP12.79□□□□□ -0.36
DDX11-227ENST00000544652 ZCCHC8Q6NZY4 707 aaKnown RBP12.79□□□□□ -0.36
DDX11-227ENST00000544652 CMC1Q7Z7K0 106 aa12.79□□□□□ -0.36
DDX11-227ENST00000544652 CROCCP2Q86T23 111 aa12.79□□□□□ -0.36
DDX11-227ENST00000544652 PACS2Q86VP3 889 aa12.79□□□□□ -0.36
DDX11-227ENST00000544652 SPNS2Q8IVW8 549 aa12.79□□□□□ -0.36
DDX11-227ENST00000544652 CYP4X1Q8N118 509 aa12.79□□□□□ -0.36
DDX11-227ENST00000544652 SFRP1Q8N474 314 aa12.79□□□□□ -0.36
DDX11-227ENST00000544652 FAM181AQ8N9Y4 354 aa12.79□□□□□ -0.36
DDX11-227ENST00000544652 GPR156Q8NFN8 814 aa12.79□□□□□ -0.36
DDX11-227ENST00000544652 ZDHHC1Q8WTX9 485 aa12.79□□□□□ -0.36
DDX11-227ENST00000544652 VIPAS39Q9H9C1 493 aa12.79□□□□□ -0.36
DDX11-227ENST00000544652 GPAMQ9HCL2 828 aa12.79□□□□□ -0.36
DDX11-227ENST00000544652 SCHIP1Q9P0W5 487 aaPredicted RBP12.79□□□□□ -0.36
DDX11-227ENST00000544652 ZNF624Q9P2J8 865 aaPredicted RBP12.79□□□□□ -0.36
DDX11-227ENST00000544652 FAM8A1Q9UBU6 413 aa12.79□□□□□ -0.36
DDX11-227ENST00000544652 TBK1Q9UHD2 729 aa12.79□□□□□ -0.36
DDX11-227ENST00000544652 RP1P56715 2156 aa12.79□□□□□ -0.36
DDX11-227ENST00000544652 PDZK1P1A8MUH7 402 aa12.78□□□□□ -0.36
DDX11-227ENST00000544652 TRIM38O00635 465 aa12.78□□□□□ -0.36
DDX11-227ENST00000544652 FFAR2O15552 330 aa12.78□□□□□ -0.36
DDX11-227ENST00000544652 PHGDHO43175 533 aaKnown RBP12.78□□□□□ -0.36
DDX11-227ENST00000544652 SNX2O60749 519 aa12.78□□□□□ -0.36
DDX11-227ENST00000544652 MPOP05164 745 aa12.78□□□□□ -0.36
DDX11-227ENST00000544652 C2P06681 752 aa12.78□□□□□ -0.36
DDX11-227ENST00000544652 SLC35G4P0C7Q5 338 aa12.78□□□□□ -0.36
DDX11-227ENST00000544652 ALPPL2P10696 532 aa12.78□□□□□ -0.36
DDX11-227ENST00000544652 TYK2P29597 1187 aa12.78□□□□□ -0.36
DDX11-227ENST00000544652 HALP42357 657 aa12.78□□□□□ -0.36
DDX11-227ENST00000544652 FASLGP48023 281 aa12.78□□□□□ -0.36
DDX11-227ENST00000544652 RGS4P49798 205 aa12.78□□□□□ -0.36
DDX11-227ENST00000544652 IL2P60568 153 aa12.78□□□□□ -0.36
DDX11-227ENST00000544652 SEPT7Q16181 437 aaKnown RBP12.78□□□□□ -0.36
DDX11-227ENST00000544652 TNFAIP8L3Q5GJ75 292 aa12.78□□□□□ -0.36
DDX11-227ENST00000544652 SH2D5Q6ZV89 423 aa12.78□□□□□ -0.36
DDX11-227ENST00000544652 HDXQ7Z353 690 aa12.78□□□□□ -0.36
DDX11-227ENST00000544652 SFTPA2Q8IWL1 248 aa12.78□□□□□ -0.36
DDX11-227ENST00000544652 NKAPQ8N5F7 415 aaKnown RBP12.78□□□□□ -0.36
DDX11-227ENST00000544652 EEF1AKMT1Q8WVE0 214 aa12.78□□□□□ -0.36
DDX11-227ENST00000544652 ANKRD49Q8WVL7 239 aa12.78□□□□□ -0.36
DDX11-227ENST00000544652 CABS1Q96KC9 395 aa12.78□□□□□ -0.36
DDX11-227ENST00000544652 INSM2Q96T92 566 aaPredicted RBP12.78□□□□□ -0.36
DDX11-227ENST00000544652 PSMD13Q9UNM6 376 aa12.78□□□□□ -0.36
DDX11-227ENST00000544652 A0A087X1B8 175 aa12.77□□□□□ -0.37
DDX11-227ENST00000544652 A0A096LPK6 155 aa12.77□□□□□ -0.37
DDX11-227ENST00000544652 TLDC2A0PJX2 215 aa12.77□□□□□ -0.37
DDX11-227ENST00000544652 SMIM23A6NLE4 172 aa12.77□□□□□ -0.37
DDX11-227ENST00000544652 GFYI3L273 518 aa12.77□□□□□ -0.37
DDX11-227ENST00000544652 IFRD1O00458 451 aaPredicted RBP12.77□□□□□ -0.37
DDX11-227ENST00000544652 MAP2K7O14733 419 aa12.77□□□□□ -0.37
DDX11-227ENST00000544652 GDF9O60383 454 aa12.77□□□□□ -0.37
DDX11-227ENST00000544652 GFRA3O60609 400 aa12.77□□□□□ -0.37
DDX11-227ENST00000544652 PSIP1O75475 530 aaKnown RBP12.77□□□□□ -0.37
DDX11-227ENST00000544652 MTHFD1P11586 935 aaKnown RBP12.77□□□□□ -0.37
DDX11-227ENST00000544652 SLC19A1P41440 591 aa12.77□□□□□ -0.37
DDX11-227ENST00000544652 GRK6P43250 576 aa12.77□□□□□ -0.37
DDX11-227ENST00000544652 MAPK9P45984 424 aa12.77□□□□□ -0.37
DDX11-227ENST00000544652 UBE2IP63279 158 aaKnown RBP12.77□□□□□ -0.37
DDX11-227ENST00000544652 RPE65Q16518 533 aa12.77□□□□□ -0.37
DDX11-227ENST00000544652 PROX2Q3B8N5 592 aa12.77□□□□□ -0.37
DDX11-227ENST00000544652 INAVAQ3KP66 663 aa12.77□□□□□ -0.37
DDX11-227ENST00000544652 C14orf28Q4W4Y0 310 aa12.77□□□□□ -0.37
DDX11-227ENST00000544652 CEP85LQ5SZL2 805 aa12.77□□□□□ -0.37
DDX11-227ENST00000544652 STPG1Q5TH74 334 aa12.77□□□□□ -0.37
DDX11-227ENST00000544652 UNC5DQ6UXZ4 953 aa12.77□□□□□ -0.37
DDX11-227ENST00000544652 EID2Q8N6I1 236 aa12.77□□□□□ -0.37
DDX11-227ENST00000544652 ARL10Q8N8L6 244 aa12.77□□□□□ -0.37
DDX11-227ENST00000544652 AVL9Q8NBF6 648 aa12.77□□□□□ -0.37
DDX11-227ENST00000544652 BAHD1Q8TBE0 780 aaPredicted RBP12.77□□□□□ -0.37
DDX11-227ENST00000544652 ACMSDQ8TDX5 336 aa12.77□□□□□ -0.37
DDX11-227ENST00000544652 SLC37A2Q8TED4 501 aa12.77□□□□□ -0.37
DDX11-227ENST00000544652 PATE1Q8WXA2 126 aa12.77□□□□□ -0.37
DDX11-227ENST00000544652 TFGQ92734 400 aaPredicted RBP12.77□□□□□ -0.37
DDX11-227ENST00000544652 LINGO1Q96FE5 620 aa12.77□□□□□ -0.37
DDX11-227ENST00000544652 APOLD1Q96LR9 279 aa12.77□□□□□ -0.37
DDX11-227ENST00000544652 C12orf66Q96MD2 445 aa12.77□□□□□ -0.37
DDX11-227ENST00000544652 DERL2Q9GZP9 239 aa12.77□□□□□ -0.37
DDX11-227ENST00000544652 POT1Q9NUX5 634 aa12.77□□□□□ -0.37
DDX11-227ENST00000544652 BTBD3Q9Y2F9 522 aa12.77□□□□□ -0.37
DDX11-227ENST00000544652 ACOT9Q9Y305 439 aa12.77□□□□□ -0.37
DDX11-227ENST00000544652 ADAMTS20P59510 1910 aa12.77□□□□□ -0.37
DDX11-227ENST00000544652 GPR179Q6PRD1 2367 aa12.77□□□□□ -0.37
DDX11-227ENST00000544652 PCNX2A6NKB5 2137 aa12.76□□□□□ -0.37
DDX11-227ENST00000544652 LY6G6EA0A0G2JKS1 128 aa12.76□□□□□ -0.37
DDX11-227ENST00000544652 A0A1W2PPM1 405 aa12.76□□□□□ -0.37
DDX11-227ENST00000544652 OR52A4PA6NMU1 304 aa12.76□□□□□ -0.37
DDX11-227ENST00000544652 C4orf47A7E2U8 309 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms