RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 SIDT2Q8NBJ9 832 aaKnown RBP9.33□□□□□ -0.92
YBX3-215ENST00000544504 OR2L2Q8NH16 312 aa9.33□□□□□ -0.92
YBX3-215ENST00000544504 RHEBL1Q8TAI7 183 aa9.33□□□□□ -0.92
YBX3-215ENST00000544504 STAG3L4Q8TBR4 150 aa9.33□□□□□ -0.92
YBX3-215ENST00000544504 TCP10LQ8TDR4 215 aa9.33□□□□□ -0.92
YBX3-215ENST00000544504 KCTD4Q8WVF5 259 aa9.33□□□□□ -0.92
YBX3-215ENST00000544504 DYDC1Q8WWB3 177 aa9.33□□□□□ -0.92
YBX3-215ENST00000544504 DNASE2BQ8WZ79 361 aa9.33□□□□□ -0.92
YBX3-215ENST00000544504 SLC39A7Q92504 469 aa9.33□□□□□ -0.92
YBX3-215ENST00000544504 LINGO1Q96FE5 620 aa9.33□□□□□ -0.92
YBX3-215ENST00000544504 HSPA12BQ96MM6 686 aa9.33□□□□□ -0.92
YBX3-215ENST00000544504 OR2M4Q96R27 311 aa9.33□□□□□ -0.92
YBX3-215ENST00000544504 MYOCQ99972 504 aa9.33□□□□□ -0.92
YBX3-215ENST00000544504 TRIM54Q9BYV2 358 aa9.33□□□□□ -0.92
YBX3-215ENST00000544504 DPEP2Q9H4A9 486 aa9.33□□□□□ -0.92
YBX3-215ENST00000544504 TFB2MQ9H5Q4 396 aaKnown RBP9.33□□□□□ -0.92
YBX3-215ENST00000544504 CAPN10Q9HC96 672 aa9.33□□□□□ -0.92
YBX3-215ENST00000544504 DNAAF2Q9NVR5 837 aaKnown RBP9.33□□□□□ -0.92
YBX3-215ENST00000544504 KLQ9UEF7 1012 aa9.33□□□□□ -0.92
YBX3-215ENST00000544504 ZNHIT2Q9UHR6 403 aa9.33□□□□□ -0.92
YBX3-215ENST00000544504 ACSL5Q9ULC5 683 aa9.33□□□□□ -0.92
YBX3-215ENST00000544504 APOBEC2Q9Y235 224 aaKnown RBP9.33□□□□□ -0.92
YBX3-215ENST00000544504 MED16Q9Y2X0 877 aa9.33□□□□□ -0.92
YBX3-215ENST00000544504 TMEM98Q9Y2Y6 226 aa9.33□□□□□ -0.92
YBX3-215ENST00000544504 ASCC3Q8N3C0 2202 aaKnown RBP9.33□□□□□ -0.92
YBX3-215ENST00000544504 ATXN2Q99700 1313 aaKnown RBP9.32□□□□□ -0.92
YBX3-215ENST00000544504 ATMQ13315 3056 aa9.32□□□□□ -0.92
YBX3-215ENST00000544504 PRSS38A1L453 326 aa9.32□□□□□ -0.92
YBX3-215ENST00000544504 CYSRT1A8MQ03 144 aa9.32□□□□□ -0.92
YBX3-215ENST00000544504 IQCF5A8MTL0 148 aa9.32□□□□□ -0.92
YBX3-215ENST00000544504 FOXO6A8MYZ6 492 aa9.32□□□□□ -0.92
YBX3-215ENST00000544504 ARHGAP33O14559 1287 aa9.32□□□□□ -0.92
YBX3-215ENST00000544504 SLC16A5O15375 505 aa9.32□□□□□ -0.92
YBX3-215ENST00000544504 SH3BP5O60239 455 aa9.32□□□□□ -0.92
YBX3-215ENST00000544504 PLIN3O60664 434 aa9.32□□□□□ -0.92
YBX3-215ENST00000544504 SMIM24O75264 130 aa9.32□□□□□ -0.92
YBX3-215ENST00000544504 H2AFYO75367 372 aaKnown RBP9.32□□□□□ -0.92
YBX3-215ENST00000544504 GPC4O75487 556 aa9.32□□□□□ -0.92
YBX3-215ENST00000544504 POP7O75817 140 aaKnown RBP9.32□□□□□ -0.92
YBX3-215ENST00000544504 RASGRP1O95267 797 aa9.32□□□□□ -0.92
YBX3-215ENST00000544504 RPN2P04844 631 aa9.32□□□□□ -0.92
YBX3-215ENST00000544504 CEACAM5P06731 702 aa9.32□□□□□ -0.92
YBX3-215ENST00000544504 C8GP07360 202 aa9.32□□□□□ -0.92
YBX3-215ENST00000544504 SYPP08247 313 aa9.32□□□□□ -0.92
YBX3-215ENST00000544504 ENO2P09104 434 aaPredicted RBP9.32□□□□□ -0.92
YBX3-215ENST00000544504 THEGLP0DJG4 465 aa9.32□□□□□ -0.92
YBX3-215ENST00000544504 CD1DP15813 335 aa9.32□□□□□ -0.92
YBX3-215ENST00000544504 CHN1P15882 459 aa9.32□□□□□ -0.92
YBX3-215ENST00000544504 ITGB6P18564 788 aa9.32□□□□□ -0.92
YBX3-215ENST00000544504 TFEBP19484 476 aa9.32□□□□□ -0.92
YBX3-215ENST00000544504 RPA3P35244 121 aaPredicted RBP9.32□□□□□ -0.92
YBX3-215ENST00000544504 CLCNKAP51800 687 aa9.32□□□□□ -0.92
YBX3-215ENST00000544504 CLDN2P57739 230 aa9.32□□□□□ -0.92
YBX3-215ENST00000544504 NAA20P61599 178 aa9.32□□□□□ -0.92
YBX3-215ENST00000544504 DMPKQ09013 629 aa9.32□□□□□ -0.92
YBX3-215ENST00000544504 HSPA14Q0VDF9 509 aa9.32□□□□□ -0.92
YBX3-215ENST00000544504 SP140Q13342 867 aa9.32□□□□□ -0.92
YBX3-215ENST00000544504 GBX1Q14549 363 aa9.32□□□□□ -0.92
YBX3-215ENST00000544504 ZNF460Q14592 562 aa9.32□□□□□ -0.92
YBX3-215ENST00000544504 ZNF648Q5T619 568 aaPredicted RBP9.32□□□□□ -0.92
YBX3-215ENST00000544504 LVRNQ6Q4G3 990 aa9.32□□□□□ -0.92
YBX3-215ENST00000544504 CRTC3Q6UUV7 619 aa9.32□□□□□ -0.92
YBX3-215ENST00000544504 ENPP7Q6UWV6 458 aa9.32□□□□□ -0.92
YBX3-215ENST00000544504 MICALCLQ6ZW33 695 aa9.32□□□□□ -0.92
YBX3-215ENST00000544504 CPNE9Q8IYJ1 553 aa9.32□□□□□ -0.92
YBX3-215ENST00000544504 RGL4Q8IZJ4 473 aa9.32□□□□□ -0.92
YBX3-215ENST00000544504 LSM14AQ8ND56 463 aaKnown RBP9.32□□□□□ -0.92
YBX3-215ENST00000544504 RAB3IL1Q8TBN0 382 aa9.32□□□□□ -0.92
YBX3-215ENST00000544504 DENND1AQ8TEH3 1009 aa9.32□□□□□ -0.92
YBX3-215ENST00000544504 KIAA1191Q96A73 305 aa9.32□□□□□ -0.92
YBX3-215ENST00000544504 NXNL1Q96CM4 212 aa9.32□□□□□ -0.92
YBX3-215ENST00000544504 CAMK1GQ96NX5 476 aa9.32□□□□□ -0.92
YBX3-215ENST00000544504 FAM111AQ96PZ2 611 aa9.32□□□□□ -0.92
YBX3-215ENST00000544504 LGR4Q9BXB1 951 aa9.32□□□□□ -0.92
YBX3-215ENST00000544504 COG4Q9H9E3 785 aa9.32□□□□□ -0.92
YBX3-215ENST00000544504 FSCN3Q9NQT6 498 aa9.32□□□□□ -0.92
YBX3-215ENST00000544504 IGSF5Q9NSI5 407 aa9.32□□□□□ -0.92
YBX3-215ENST00000544504 TRNAU1APQ9NX07 287 aaKnown RBP9.32□□□□□ -0.92
YBX3-215ENST00000544504 EIF2B4Q9UI10 523 aaKnown RBP9.32□□□□□ -0.92
YBX3-215ENST00000544504 MOSPD1Q9UJG1 213 aa9.32□□□□□ -0.92
YBX3-215ENST00000544504 DGKBQ9Y6T7 804 aa9.32□□□□□ -0.92
YBX3-215ENST00000544504 PIKFYVEQ9Y2I7 2098 aa9.32□□□□□ -0.92
YBX3-215ENST00000544504 PCNX2A6NKB5 2137 aa9.31□□□□□ -0.92
YBX3-215ENST00000544504 ZNF462Q96JM2 2506 aa9.31□□□□□ -0.92
YBX3-215ENST00000544504 SPTY2D1-AS1A0A0U1RR47 76 aa9.31□□□□□ -0.92
YBX3-215ENST00000544504 SLC5A10A0PJK1 596 aa9.31□□□□□ -0.92
YBX3-215ENST00000544504 TMEM202A6NGA9 273 aa9.31□□□□□ -0.92
YBX3-215ENST00000544504 H3BM21 787 aa9.31□□□□□ -0.92
YBX3-215ENST00000544504 IFRD1O00458 451 aaPredicted RBP9.31□□□□□ -0.92
YBX3-215ENST00000544504 BTN3A1O00481 513 aa9.31□□□□□ -0.92
YBX3-215ENST00000544504 ATXN7O15265 892 aaPredicted RBP9.31□□□□□ -0.92
YBX3-215ENST00000544504 BCAT2O15382 392 aaPredicted RBP9.31□□□□□ -0.92
YBX3-215ENST00000544504 ZBTB14O43829 449 aa9.31□□□□□ -0.92
YBX3-215ENST00000544504 KDM1AO60341 852 aa9.31□□□□□ -0.92
YBX3-215ENST00000544504 KERAO60938 352 aa9.31□□□□□ -0.92
YBX3-215ENST00000544504 TNFP01375 233 aa9.31□□□□□ -0.92
YBX3-215ENST00000544504 CATP04040 527 aaKnown RBP9.31□□□□□ -0.92
YBX3-215ENST00000544504 PROCP04070 461 aa9.31□□□□□ -0.92
YBX3-215ENST00000544504 S100BP04271 92 aaPredicted RBP9.31□□□□□ -0.92
YBX3-215ENST00000544504 TPBGLP0DKB5 382 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms