RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 CCDC162PA2VCL2 907 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 J3KR12 359 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 S100A6P06703 90 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 CTSAP10619 480 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 LAMP2P13473 410 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 MTTPP55157 894 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 PSME3P61289 254 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 OC90Q02509 493 aaPredicted RBP6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 RPL6Q02878 288 aaKnown RBP6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 RTP2Q5QGT7 225 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 SLC30A6Q6NXT4 461 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 EXOC3L1Q86VI1 746 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 OFCC1Q8IZS5 231 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 LRRC57Q8N9N7 239 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 MOSPD2Q8NHP6 518 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 DHRS1Q96LJ7 313 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 CDCA3Q99618 268 aaPredicted RBP6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 SGIP1Q9BQI5 828 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 TMEM79Q9BSE2 394 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 WDR6Q9NNW5 1121 aaKnown RBP6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 KLHL1Q9NR64 748 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 CYP8B1Q9UNU6 501 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 COQ6Q9Y2Z9 468 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 A0A1W2PPM1 405 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 OR6B1O95007 311 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 BPGMP07738 259 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 CPN2P22792 545 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 PSMD4P55036 377 aaKnown RBP6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 CDC42P60953 191 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 PTSQ03393 145 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 CLCQ05315 142 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 SMAD4Q13485 552 aaKnown RBP6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 GTF2H2Q13888 395 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 EIF4HQ15056 248 aaKnown RBP6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 ANKRD22Q5VYY1 191 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 GTF2H2CQ6P1K8 395 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 DEF8Q6ZN54 512 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 DENND6AQ8IWF6 608 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 CMASQ8NFW8 434 aaPredicted RBP6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 RP9Q8TA86 221 aaKnown RBP6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 PIGKQ92643 395 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 DLG3Q92796 817 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 ZBED3Q96IU2 234 aaPredicted RBP6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 SLC38A2Q96QD8 506 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 MECRQ9BV79 373 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 CA14Q9ULX7 337 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 ADAMTS5Q9UNA0 930 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 TIMM22Q9Y584 194 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 MYH2Q9UKX2 1941 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 TCRBV21S2A2A0A5A6 115 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 ANKRD66B4E2M5 251 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 H3BQ06 376 aaPredicted RBP6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 OR10H3O60404 316 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 LYPLA1O75608 230 aaPredicted RBP6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 CNMDO75829 334 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 KAT7O95251 611 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 CFHP08603 1231 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 COX4I1P13073 169 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 PSMB9P28065 219 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 CRHR1P34998 444 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 GRIA3P42263 894 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 SOX4Q06945 474 aaPredicted RBP6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 LARS2Q15031 903 aaKnown RBP6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 PPA1Q15181 289 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 PLEKHG4Q58EX7 1191 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 FBXO48Q5FWF7 155 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 ZNF852Q6ZMS4 543 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 GPR141Q7Z602 305 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 TMCO2Q7Z6W1 182 aaPredicted RBP6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 PLPP7Q8NBV4 271 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 FBXO15Q8NCQ5 510 aaPredicted RBP6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 TTLQ8NG68 377 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 AZIN2Q96A70 460 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 JSRP1Q96MG2 331 aaPredicted RBP6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 NPY6RQ99463 290 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 HERC2P3Q9BVR0 1158 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 REPIN1Q9BWE0 567 aaKnown RBP6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 COPG2Q9UBF2 871 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 SEC14L3Q9UDX4 400 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 SUV39H1O43463 412 aa6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 KDELR3O43731 214 aa6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 POP7O75817 140 aaKnown RBP6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 GJB5O95377 273 aa6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 CASRP41180 1078 aa6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 GRIA2P42262 883 aa6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 PTPN5P54829 565 aa6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 PRR5P85299 388 aa6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 NR1D2Q14995 579 aa6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 CST9Q5W186 159 aa6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 NCBP2-AS2Q69YL0 99 aa6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 CHRDL2Q6WN34 429 aa6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 LRRC74BQ6ZQY2 392 aa6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 FAM220AQ7Z4H9 259 aa6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 SPATA19Q7Z5L4 167 aa6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 DHDDSQ86SQ9 333 aa6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 PHC2Q8IXK0 858 aa6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 POP5Q969H6 163 aaKnown RBP6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 C19orf60Q96EN9 201 aa6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 PTCD3Q96EY7 689 aaKnown RBP6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 VPS35Q96QK1 796 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms