RNA–Protein interactions for RNA: ENST00000540812.1

TRIM65-203, Transcript of tripartite motif containing 65, humanhuman

TSL 2

Gene TRIM65, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-203ENST00000540812 PAPD7Q5XG87 772 aaKnown RBP15.77■□□□□ 0.12
TRIM65-203ENST00000540812 HIST2H2BCQ6DN03 193 aa15.77■□□□□ 0.12
TRIM65-203ENST00000540812 DENND5AQ6IQ26 1287 aa15.77■□□□□ 0.12
TRIM65-203ENST00000540812 FAM198BQ6UWH4 519 aa15.77■□□□□ 0.12
TRIM65-203ENST00000540812 EFCAB3Q8N7B9 438 aa15.77■□□□□ 0.12
TRIM65-203ENST00000540812 CCDC110Q8TBZ0 833 aa15.77■□□□□ 0.12
TRIM65-203ENST00000540812 LCN9Q8WX39 176 aa15.77■□□□□ 0.12
TRIM65-203ENST00000540812 CPT1BQ92523 772 aa15.77■□□□□ 0.12
TRIM65-203ENST00000540812 CLIP3Q96DZ5 547 aa15.77■□□□□ 0.12
TRIM65-203ENST00000540812 COPS8Q99627 209 aa15.77■□□□□ 0.12
TRIM65-203ENST00000540812 KLHL25Q9H0H3 589 aa15.77■□□□□ 0.12
TRIM65-203ENST00000540812 OR52A5Q9H2C5 316 aa15.77■□□□□ 0.12
TRIM65-203ENST00000540812 SRMSQ9H3Y6 488 aa15.77■□□□□ 0.12
TRIM65-203ENST00000540812 PCMTD2Q9NV79 361 aa15.77■□□□□ 0.12
TRIM65-203ENST00000540812 SNX7Q9UNH6 387 aa15.77■□□□□ 0.12
TRIM65-203ENST00000540812 AAR2Q9Y312 384 aaKnown RBP15.77■□□□□ 0.12
TRIM65-203ENST00000540812 HEBP2Q9Y5Z4 205 aa15.77■□□□□ 0.12
TRIM65-203ENST00000540812 SHANK1Q9Y566 2161 aa15.76■□□□□ 0.11
TRIM65-203ENST00000540812 KCNN4O15554 427 aa15.76■□□□□ 0.11
TRIM65-203ENST00000540812 PJA2O43164 708 aa15.76■□□□□ 0.11
TRIM65-203ENST00000540812 LDB2O43679 373 aa15.76■□□□□ 0.11
TRIM65-203ENST00000540812 VPS4BO75351 444 aa15.76■□□□□ 0.11
TRIM65-203ENST00000540812 CEACAM4O75871 244 aa15.76■□□□□ 0.11
TRIM65-203ENST00000540812 SORBS2O94875 1100 aaKnown RBP15.76■□□□□ 0.11
TRIM65-203ENST00000540812 CRTAMO95727 393 aa15.76■□□□□ 0.11
TRIM65-203ENST00000540812 PVRP15151 417 aa15.76■□□□□ 0.11
TRIM65-203ENST00000540812 ITGALP20701 1170 aa15.76■□□□□ 0.11
TRIM65-203ENST00000540812 PDHA2P29803 388 aa15.76■□□□□ 0.11
TRIM65-203ENST00000540812 PRDX3P30048 256 aaKnown RBP15.76■□□□□ 0.11
TRIM65-203ENST00000540812 CDC25BP30305 580 aa15.76■□□□□ 0.11
TRIM65-203ENST00000540812 MC4RP32245 332 aa15.76■□□□□ 0.11
TRIM65-203ENST00000540812 PREPP48147 710 aa15.76■□□□□ 0.11
TRIM65-203ENST00000540812 ITGA1P56199 1179 aa15.76■□□□□ 0.11
TRIM65-203ENST00000540812 EIF3EP60228 445 aaKnown RBP15.76■□□□□ 0.11
TRIM65-203ENST00000540812 PRPSAP1Q14558 356 aa15.76■□□□□ 0.11
TRIM65-203ENST00000540812 PTCHD3Q3KNS1 767 aa15.76■□□□□ 0.11
TRIM65-203ENST00000540812 SNX20Q7Z614 316 aa15.76■□□□□ 0.11
TRIM65-203ENST00000540812 CDKL3Q8IVW4 592 aaPredicted RBP15.76■□□□□ 0.11
TRIM65-203ENST00000540812 SYTL1Q8IYJ3 562 aa15.76■□□□□ 0.11
TRIM65-203ENST00000540812 ZBTB2Q8N680 514 aa15.76■□□□□ 0.11
TRIM65-203ENST00000540812 GALNT11Q8NCW6 608 aa15.76■□□□□ 0.11
TRIM65-203ENST00000540812 PHC3Q8NDX5 983 aa15.76■□□□□ 0.11
TRIM65-203ENST00000540812 OR52E1Q8NGJ3 308 aa15.76■□□□□ 0.11
TRIM65-203ENST00000540812 DNAJC1Q96KC8 554 aaKnown RBP15.76■□□□□ 0.11
TRIM65-203ENST00000540812 SPATA13Q96N96 652 aa15.76■□□□□ 0.11
TRIM65-203ENST00000540812 PANX2Q96RD6 677 aa15.76■□□□□ 0.11
TRIM65-203ENST00000540812 TBL1YQ9BQ87 522 aa15.76■□□□□ 0.11
TRIM65-203ENST00000540812 NLNQ9BYT8 704 aa15.76■□□□□ 0.11
TRIM65-203ENST00000540812 OSBPL8Q9BZF1 889 aa15.76■□□□□ 0.11
TRIM65-203ENST00000540812 XKR8Q9H6D3 395 aa15.76■□□□□ 0.11
TRIM65-203ENST00000540812 ACTR5Q9H9F9 607 aaPredicted RBP15.76■□□□□ 0.11
TRIM65-203ENST00000540812 TCFL5Q9UL49 500 aa15.76■□□□□ 0.11
TRIM65-203ENST00000540812 VPS4AQ9UN37 437 aa15.76■□□□□ 0.11
TRIM65-203ENST00000540812 PCSK5Q92824 1860 aa15.76■□□□□ 0.11
TRIM65-203ENST00000540812 IGLV3-16A0A075B6K0 115 aa15.75■□□□□ 0.11
TRIM65-203ENST00000540812 C17orf113A0A1B0GUU1 675 aa15.75■□□□□ 0.11
TRIM65-203ENST00000540812 RCCD1A6NED2 376 aa15.75■□□□□ 0.11
TRIM65-203ENST00000540812 CFAP99D6REC4 459 aa15.75■□□□□ 0.11
TRIM65-203ENST00000540812 MATN2O00339 956 aa15.75■□□□□ 0.11
TRIM65-203ENST00000540812 TMEM63AO94886 807 aa15.75■□□□□ 0.11
TRIM65-203ENST00000540812 RBP3P10745 1247 aa15.75■□□□□ 0.11
TRIM65-203ENST00000540812 CTNNA1P35221 906 aaKnown RBP15.75■□□□□ 0.11
TRIM65-203ENST00000540812 COPS2P61201 443 aa15.75■□□□□ 0.11
TRIM65-203ENST00000540812 PRR30Q53SZ7 412 aaPredicted RBP15.75■□□□□ 0.11
TRIM65-203ENST00000540812 AADACL2Q6P093 401 aa15.75■□□□□ 0.11
TRIM65-203ENST00000540812 DARS2Q6PI48 645 aaKnown RBP15.75■□□□□ 0.11
TRIM65-203ENST00000540812 FDCSPQ8NFU4 85 aa15.75■□□□□ 0.11
TRIM65-203ENST00000540812 HEXDCQ8WVB3 486 aa15.75■□□□□ 0.11
TRIM65-203ENST00000540812 TRAPPC9Q96Q05 1148 aa15.75■□□□□ 0.11
TRIM65-203ENST00000540812 FERMT1Q9BQL6 677 aa15.75■□□□□ 0.11
TRIM65-203ENST00000540812 HGH1Q9BTY7 390 aa15.75■□□□□ 0.11
TRIM65-203ENST00000540812 PITPNM3Q9BZ71 974 aa15.75■□□□□ 0.11
TRIM65-203ENST00000540812 TFB2MQ9H5Q4 396 aaKnown RBP15.75■□□□□ 0.11
TRIM65-203ENST00000540812 ZDHHC3Q9NYG2 299 aa15.75■□□□□ 0.11
TRIM65-203ENST00000540812 LUZP4Q9P127 313 aa15.75■□□□□ 0.11
TRIM65-203ENST00000540812 MAP4K5Q9Y4K4 846 aa15.75■□□□□ 0.11
TRIM65-203ENST00000540812 PCDHA3Q9Y5H8 950 aa15.75■□□□□ 0.11
TRIM65-203ENST00000540812 UNC79Q9P2D8 2635 aa15.74■□□□□ 0.11
TRIM65-203ENST00000540812 A6NL46 340 aa15.74■□□□□ 0.11
TRIM65-203ENST00000540812 ZNF185O15231 689 aa15.74■□□□□ 0.11
TRIM65-203ENST00000540812 CYP2A7P20853 494 aa15.74■□□□□ 0.11
TRIM65-203ENST00000540812 CTNNA2P26232 953 aa15.74■□□□□ 0.11
TRIM65-203ENST00000540812 ACRV1P26436 265 aa15.74■□□□□ 0.11
TRIM65-203ENST00000540812 PTPN7P35236 360 aa15.74■□□□□ 0.11
TRIM65-203ENST00000540812 HADHAP40939 763 aa15.74■□□□□ 0.11
TRIM65-203ENST00000540812 VAV2P52735 878 aa15.74■□□□□ 0.11
TRIM65-203ENST00000540812 PRKG2Q13237 762 aa15.74■□□□□ 0.11
TRIM65-203ENST00000540812 NCF4Q15080 339 aa15.74■□□□□ 0.11
TRIM65-203ENST00000540812 CDHR3Q6ZTQ4 885 aa15.74■□□□□ 0.11
TRIM65-203ENST00000540812 SERPINA9Q86WD7 417 aa15.74■□□□□ 0.11
TRIM65-203ENST00000540812 KLHDC8BQ8IXV7 354 aa15.74■□□□□ 0.11
TRIM65-203ENST00000540812 CCDC170Q8IYT3 715 aa15.74■□□□□ 0.11
TRIM65-203ENST00000540812 ADGRF3Q8IZF5 1079 aa15.74■□□□□ 0.11
TRIM65-203ENST00000540812 Q8NA96 180 aa15.74■□□□□ 0.11
TRIM65-203ENST00000540812 NUDT9Q9BW91 350 aa15.74■□□□□ 0.11
TRIM65-203ENST00000540812 MFRPQ9BY79 579 aa15.74■□□□□ 0.11
TRIM65-203ENST00000540812 ARNT2Q9HBZ2 717 aa15.74■□□□□ 0.11
TRIM65-203ENST00000540812 SYTL2Q9HCH5 934 aa15.74■□□□□ 0.11
TRIM65-203ENST00000540812 LRRC4CQ9HCJ2 640 aa15.74■□□□□ 0.11
TRIM65-203ENST00000540812 ACTR10Q9NZ32 417 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms