RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 P2RY8Q86VZ1 359 aa13.69□□□□□ -0.22
SCNN1A-215ENST00000540037 GPSM1Q86YR5 675 aa13.69□□□□□ -0.22
SCNN1A-215ENST00000540037 CLIP4Q8N3C7 705 aa13.69□□□□□ -0.22
SCNN1A-215ENST00000540037 OR4F6Q8NGB9 312 aa13.69□□□□□ -0.22
SCNN1A-215ENST00000540037 BRSK1Q8TDC3 778 aa13.69□□□□□ -0.22
SCNN1A-215ENST00000540037 GTF2H4Q92759 462 aa13.69□□□□□ -0.22
SCNN1A-215ENST00000540037 TADA1Q96BN2 335 aa13.69□□□□□ -0.22
SCNN1A-215ENST00000540037 PYCR2Q96C36 320 aa13.69□□□□□ -0.22
SCNN1A-215ENST00000540037 ZYG11BQ9C0D3 744 aa13.69□□□□□ -0.22
SCNN1A-215ENST00000540037 PRDM5Q9NQX1 630 aaPredicted RBP13.69□□□□□ -0.22
SCNN1A-215ENST00000540037 PSMD11O00231 422 aa13.69□□□□□ -0.22
SCNN1A-215ENST00000540037 PFDN6O15212 129 aa13.69□□□□□ -0.22
SCNN1A-215ENST00000540037 SERPINA1P01009 418 aa13.69□□□□□ -0.22
SCNN1A-215ENST00000540037 MT-ND2P03891 347 aa13.69□□□□□ -0.22
SCNN1A-215ENST00000540037 GSNP06396 782 aa13.69□□□□□ -0.22
SCNN1A-215ENST00000540037 CRYBB1P53674 252 aaPredicted RBP13.69□□□□□ -0.22
SCNN1A-215ENST00000540037 CDC42EP1Q00587 391 aa13.69□□□□□ -0.22
SCNN1A-215ENST00000540037 EFEMP1Q12805 493 aa13.69□□□□□ -0.22
SCNN1A-215ENST00000540037 GBX1Q14549 363 aa13.69□□□□□ -0.22
SCNN1A-215ENST00000540037 KIAA0040Q15053 153 aa13.69□□□□□ -0.22
SCNN1A-215ENST00000540037 TYSND1Q2T9J0 566 aa13.69□□□□□ -0.22
SCNN1A-215ENST00000540037 SPANXN4Q5MJ08 99 aa13.69□□□□□ -0.22
SCNN1A-215ENST00000540037 DEPDC1Q5TB30 811 aa13.69□□□□□ -0.22
SCNN1A-215ENST00000540037 CHPFQ8IZ52 775 aa13.69□□□□□ -0.22
SCNN1A-215ENST00000540037 ARL10Q8N8L6 244 aa13.69□□□□□ -0.22
SCNN1A-215ENST00000540037 MDGA1Q8NFP4 955 aa13.69□□□□□ -0.22
SCNN1A-215ENST00000540037 NPLOC4Q8TAT6 608 aa13.69□□□□□ -0.22
SCNN1A-215ENST00000540037 ZNF300Q96RE9 604 aaPredicted RBP13.69□□□□□ -0.22
SCNN1A-215ENST00000540037 PKMYT1Q99640 499 aa13.69□□□□□ -0.22
SCNN1A-215ENST00000540037 EHD1Q9H4M9 534 aa13.69□□□□□ -0.22
SCNN1A-215ENST00000540037 GORASP2Q9H8Y8 452 aa13.69□□□□□ -0.22
SCNN1A-215ENST00000540037 POPDC3Q9HBV1 291 aa13.69□□□□□ -0.22
SCNN1A-215ENST00000540037 ANKMY1Q9P2S6 941 aa13.69□□□□□ -0.22
SCNN1A-215ENST00000540037 C3orf18Q9UK00 162 aa13.69□□□□□ -0.22
SCNN1A-215ENST00000540037 DOCK4Q8N1I0 1966 aa13.68□□□□□ -0.22
SCNN1A-215ENST00000540037 SEC24AO95486 1093 aa13.68□□□□□ -0.22
SCNN1A-215ENST00000540037 SPNP16150 400 aa13.68□□□□□ -0.22
SCNN1A-215ENST00000540037 CD40LGP29965 261 aa13.68□□□□□ -0.22
SCNN1A-215ENST00000540037 RGRP47804 291 aa13.68□□□□□ -0.22
SCNN1A-215ENST00000540037 MRPL19P49406 292 aaKnown RBP13.68□□□□□ -0.22
SCNN1A-215ENST00000540037 CLCA4Q14CN2 919 aa13.68□□□□□ -0.22
SCNN1A-215ENST00000540037 PCBP1Q15365 356 aaKnown RBP eCLIP13.68□□□□□ -0.22
SCNN1A-215ENST00000540037 DDR2Q16832 855 aa13.68□□□□□ -0.22
SCNN1A-215ENST00000540037 DGUOKQ16854 277 aa13.68□□□□□ -0.22
SCNN1A-215ENST00000540037 SGO1Q5FBB7 561 aa13.68□□□□□ -0.22
SCNN1A-215ENST00000540037 CEP68Q76N32 757 aa13.68□□□□□ -0.22
SCNN1A-215ENST00000540037 TEX26Q8N6G2 289 aa13.68□□□□□ -0.22
SCNN1A-215ENST00000540037 PIK3C3Q8NEB9 887 aa13.68□□□□□ -0.22
SCNN1A-215ENST00000540037 KLHDC9Q8NEP7 349 aa13.68□□□□□ -0.22
SCNN1A-215ENST00000540037 SLC13A3Q8WWT9 602 aa13.68□□□□□ -0.22
SCNN1A-215ENST00000540037 YIPF6Q96EC8 236 aa13.68□□□□□ -0.22
SCNN1A-215ENST00000540037 ACBD6Q9BR61 282 aa13.68□□□□□ -0.22
SCNN1A-215ENST00000540037 SLIRPQ9GZT3 109 aaKnown RBP13.68□□□□□ -0.22
SCNN1A-215ENST00000540037 HEBP1Q9NRV9 189 aa13.68□□□□□ -0.22
SCNN1A-215ENST00000540037 RASSF1Q9NS23 344 aa13.68□□□□□ -0.22
SCNN1A-215ENST00000540037 A0A0D9SEW6 157 aa13.68□□□□□ -0.22
SCNN1A-215ENST00000540037 STX16O14662 325 aa13.68□□□□□ -0.22
SCNN1A-215ENST00000540037 LCKP06239 509 aa13.68□□□□□ -0.22
SCNN1A-215ENST00000540037 MYCLP1P12525 358 aaPredicted RBP13.68□□□□□ -0.22
SCNN1A-215ENST00000540037 ACVR2AP27037 513 aa13.68□□□□□ -0.22
SCNN1A-215ENST00000540037 CARD16Q5EG05 197 aa13.68□□□□□ -0.22
SCNN1A-215ENST00000540037 CTSL3PQ5NE16 218 aa13.68□□□□□ -0.22
SCNN1A-215ENST00000540037 EID3Q8N140 333 aa13.68□□□□□ -0.22
SCNN1A-215ENST00000540037 CFAP52Q8N1V2 620 aa13.68□□□□□ -0.22
SCNN1A-215ENST00000540037 S100ZQ8WXG8 99 aa13.68□□□□□ -0.22
SCNN1A-215ENST00000540037 TINF2Q9BSI4 451 aa13.68□□□□□ -0.22
SCNN1A-215ENST00000540037 ST3GAL5Q9UNP4 418 aa13.68□□□□□ -0.22
SCNN1A-215ENST00000540037 ELOVL7A1L3X0 281 aa13.67□□□□□ -0.22
SCNN1A-215ENST00000540037 DYTNA2CJ06 578 aa13.67□□□□□ -0.22
SCNN1A-215ENST00000540037 ARNTLO00327 626 aa13.67□□□□□ -0.22
SCNN1A-215ENST00000540037 OR7A17O14581 309 aa13.67□□□□□ -0.22
SCNN1A-215ENST00000540037 SLC22A1O15245 554 aa13.67□□□□□ -0.22
SCNN1A-215ENST00000540037 MGEA5O60502 916 aa13.67□□□□□ -0.22
SCNN1A-215ENST00000540037 GUCA1CO95843 209 aa13.67□□□□□ -0.22
SCNN1A-215ENST00000540037 NPPAP01160 153 aa13.67□□□□□ -0.22
SCNN1A-215ENST00000540037 ODC1P11926 461 aa13.67□□□□□ -0.22
SCNN1A-215ENST00000540037 GDF5P43026 501 aa13.67□□□□□ -0.22
SCNN1A-215ENST00000540037 CD300LGQ6UXG3 332 aa13.67□□□□□ -0.22
SCNN1A-215ENST00000540037 RMDN1Q96DB5 314 aa13.67□□□□□ -0.22
SCNN1A-215ENST00000540037 ZBTB20Q9HC78 741 aaPredicted RBP13.67□□□□□ -0.22
SCNN1A-215ENST00000540037 FBXO8Q9NRD0 319 aa13.67□□□□□ -0.22
SCNN1A-215ENST00000540037 ABI2Q9NYB9 513 aaPredicted RBP13.67□□□□□ -0.22
SCNN1A-215ENST00000540037 USE1Q9NZ43 259 aa13.67□□□□□ -0.22
SCNN1A-215ENST00000540037 SPATA7Q9P0W8 599 aa13.67□□□□□ -0.22
SCNN1A-215ENST00000540037 PKP3Q9Y446 797 aa13.67□□□□□ -0.22
SCNN1A-215ENST00000540037 COL4A4P53420 1690 aaPredicted RBP13.67□□□□□ -0.22
SCNN1A-215ENST00000540037 GPR182O15218 404 aa13.67□□□□□ -0.22
SCNN1A-215ENST00000540037 TBX1O43435 398 aa13.67□□□□□ -0.22
SCNN1A-215ENST00000540037 KLK8O60259 260 aa13.67□□□□□ -0.22
SCNN1A-215ENST00000540037 CYP11A1P05108 521 aa13.67□□□□□ -0.22
SCNN1A-215ENST00000540037 RHOQP17081 205 aa13.67□□□□□ -0.22
SCNN1A-215ENST00000540037 OGNP20774 298 aaKnown RBP13.67□□□□□ -0.22
SCNN1A-215ENST00000540037 PCYT1AP49585 367 aa13.67□□□□□ -0.22
SCNN1A-215ENST00000540037 CLK3P49761 638 aaKnown RBP13.67□□□□□ -0.22
SCNN1A-215ENST00000540037 SYT16Q17RD7 645 aa13.67□□□□□ -0.22
SCNN1A-215ENST00000540037 ATAD3BQ5T9A4 648 aa13.67□□□□□ -0.22
SCNN1A-215ENST00000540037 GOLGA7Q7Z5G4 137 aa13.67□□□□□ -0.22
SCNN1A-215ENST00000540037 ANKRD46Q86W74 232 aa13.67□□□□□ -0.22
SCNN1A-215ENST00000540037 LRRC49Q8IUZ0 686 aa13.67□□□□□ -0.22
SCNN1A-215ENST00000540037 FAM83FQ8NEG4 500 aaPredicted RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms