RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 SLC12A9Q9BXP2 914 aa16.55■□□□□ 0.24
COPS3-212ENST00000539941 TRIM54Q9BYV2 358 aa16.55■□□□□ 0.24
COPS3-212ENST00000539941 PTBP2Q9UKA9 531 aaKnown RBP16.55■□□□□ 0.24
COPS3-212ENST00000539941 ADAMTS6Q9UKP5 1117 aa16.55■□□□□ 0.24
COPS3-212ENST00000539941 TRIM33Q9UPN9 1127 aa16.55■□□□□ 0.24
COPS3-212ENST00000539941 CDYLQ9Y232 598 aa16.55■□□□□ 0.24
COPS3-212ENST00000539941 STK38LQ9Y2H1 464 aa16.55■□□□□ 0.24
COPS3-212ENST00000539941 TRAF6Q9Y4K3 522 aa16.55■□□□□ 0.24
COPS3-212ENST00000539941 TRPM6Q9BX84 2022 aa16.54■□□□□ 0.24
COPS3-212ENST00000539941 MAN2B1O00754 1011 aa16.54■□□□□ 0.24
COPS3-212ENST00000539941 UBFD1O14562 309 aaKnown RBP16.54■□□□□ 0.24
COPS3-212ENST00000539941 KRT16P08779 473 aa16.54■□□□□ 0.24
COPS3-212ENST00000539941 CCR3P51677 355 aa16.54■□□□□ 0.24
COPS3-212ENST00000539941 INHBCP55103 352 aa16.54■□□□□ 0.24
COPS3-212ENST00000539941 CDH13P55290 713 aa16.54■□□□□ 0.24
COPS3-212ENST00000539941 ZP2Q05996 745 aa16.54■□□□□ 0.24
COPS3-212ENST00000539941 MAP7D1Q3KQU3 841 aa16.54■□□□□ 0.24
COPS3-212ENST00000539941 SLC9B1Q4ZJI4 515 aa16.54■□□□□ 0.24
COPS3-212ENST00000539941 SLC44A4Q53GD3 710 aa16.54■□□□□ 0.24
COPS3-212ENST00000539941 VWA5B1Q5TIE3 1220 aa16.54■□□□□ 0.24
COPS3-212ENST00000539941 RPS27LQ71UM5 84 aaKnown RBP16.54■□□□□ 0.24
COPS3-212ENST00000539941 ADGRG6Q86SQ4 1221 aa16.54■□□□□ 0.24
COPS3-212ENST00000539941 OR56A4Q8NGH8 313 aa16.54■□□□□ 0.24
COPS3-212ENST00000539941 GANCQ8TET4 914 aa16.54■□□□□ 0.24
COPS3-212ENST00000539941 ASB11Q8WXH4 323 aa16.54■□□□□ 0.24
COPS3-212ENST00000539941 TMEM159Q96B96 161 aa16.54■□□□□ 0.24
COPS3-212ENST00000539941 LINC00615Q96LM1 132 aaPredicted RBP16.54■□□□□ 0.24
COPS3-212ENST00000539941 NUF2Q9BZD4 464 aa16.54■□□□□ 0.24
COPS3-212ENST00000539941 PREBQ9HCU5 417 aa16.54■□□□□ 0.24
COPS3-212ENST00000539941 UTP6Q9NYH9 597 aaKnown RBP16.54■□□□□ 0.24
COPS3-212ENST00000539941 TSR3Q9UJK0 312 aaKnown RBP16.54■□□□□ 0.24
COPS3-212ENST00000539941 GPR34Q9UPC5 381 aa16.54■□□□□ 0.24
COPS3-212ENST00000539941 ATG2BQ96BY7 2078 aa16.54■□□□□ 0.24
COPS3-212ENST00000539941 MYO10Q9HD67 2058 aa16.53■□□□□ 0.24
COPS3-212ENST00000539941 LRRC14BA6NHZ5 514 aa16.53■□□□□ 0.24
COPS3-212ENST00000539941 GFYI3L273 518 aa16.53■□□□□ 0.24
COPS3-212ENST00000539941 NARSO43776 548 aaKnown RBP16.53■□□□□ 0.24
COPS3-212ENST00000539941 AGTR2P50052 363 aa16.53■□□□□ 0.24
COPS3-212ENST00000539941 RASSF2P50749 326 aa16.53■□□□□ 0.24
COPS3-212ENST00000539941 PHKG1Q16816 387 aa16.53■□□□□ 0.24
COPS3-212ENST00000539941 SYTL3Q4VX76 610 aa16.53■□□□□ 0.24
COPS3-212ENST00000539941 NEK5Q6P3R8 708 aa16.53■□□□□ 0.24
COPS3-212ENST00000539941 RASGRP3Q8IV61 690 aa16.53■□□□□ 0.24
COPS3-212ENST00000539941 ADHFE1Q8IWW8 467 aa16.53■□□□□ 0.24
COPS3-212ENST00000539941 TCAIMQ8N3R3 496 aa16.53■□□□□ 0.24
COPS3-212ENST00000539941 BEND7Q8N7W2 519 aaPredicted RBP16.53■□□□□ 0.24
COPS3-212ENST00000539941 TRPC4APQ8TEL6 797 aa16.53■□□□□ 0.24
COPS3-212ENST00000539941 DLG3Q92796 817 aa16.53■□□□□ 0.24
COPS3-212ENST00000539941 SIPA1Q96FS4 1042 aa16.53■□□□□ 0.24
COPS3-212ENST00000539941 MAELQ96JY0 434 aaKnown RBP16.53■□□□□ 0.24
COPS3-212ENST00000539941 C1QTNF7Q9BXJ2 289 aa16.53■□□□□ 0.24
COPS3-212ENST00000539941 C1QTNF2Q9BXJ5 285 aa16.53■□□□□ 0.24
COPS3-212ENST00000539941 OR2AG1Q9H205 316 aa16.53■□□□□ 0.24
COPS3-212ENST00000539941 MEAF6Q9HAF1 191 aa16.53■□□□□ 0.24
COPS3-212ENST00000539941 PARVBQ9HBI1 364 aa16.53■□□□□ 0.24
COPS3-212ENST00000539941 MID1IP1Q9NPA3 183 aa16.53■□□□□ 0.24
COPS3-212ENST00000539941 PDP2Q9P2J9 529 aa16.53■□□□□ 0.24
COPS3-212ENST00000539941 NCKAP1Q9Y2A7 1128 aa16.53■□□□□ 0.24
COPS3-212ENST00000539941 C17orf113A0A1B0GUU1 675 aa16.53■□□□□ 0.24
COPS3-212ENST00000539941 SLC5A10A0PJK1 596 aa16.53■□□□□ 0.24
COPS3-212ENST00000539941 PABPN1LA6NDY0 278 aaKnown RBP16.53■□□□□ 0.24
COPS3-212ENST00000539941 SHISA7A6NL88 538 aa16.53■□□□□ 0.24
COPS3-212ENST00000539941 TMEM233B4DJY2 109 aa16.53■□□□□ 0.24
COPS3-212ENST00000539941 E2F3O00716 465 aa16.53■□□□□ 0.24
COPS3-212ENST00000539941 LILRB5O75023 590 aa16.53■□□□□ 0.24
COPS3-212ENST00000539941 ANXA5P08758 320 aa16.53■□□□□ 0.24
COPS3-212ENST00000539941 CYP2A7P20853 494 aa16.53■□□□□ 0.24
COPS3-212ENST00000539941 RANBP1P43487 201 aa16.53■□□□□ 0.24
COPS3-212ENST00000539941 ADPRHP54922 357 aa16.53■□□□□ 0.24
COPS3-212ENST00000539941 AP1S2P56377 157 aa16.53■□□□□ 0.24
COPS3-212ENST00000539941 SH3BP2P78314 561 aa16.53■□□□□ 0.24
COPS3-212ENST00000539941 PLOD1Q02809 727 aaPredicted RBP16.53■□□□□ 0.24
COPS3-212ENST00000539941 CDC16Q13042 620 aa16.53■□□□□ 0.24
COPS3-212ENST00000539941 WSCD2Q2TBF2 565 aa16.53■□□□□ 0.24
COPS3-212ENST00000539941 ZNF658BQ4V348 819 aaPredicted RBP16.53■□□□□ 0.24
COPS3-212ENST00000539941 TMEM259Q4ZIN3 620 aa16.53■□□□□ 0.24
COPS3-212ENST00000539941 IER5LQ5T953 404 aa16.53■□□□□ 0.24
COPS3-212ENST00000539941 UBE2R2Q712K3 238 aaPredicted RBP16.53■□□□□ 0.24
COPS3-212ENST00000539941 EFL1Q7Z2Z2 1120 aaKnown RBP16.53■□□□□ 0.24
COPS3-212ENST00000539941 CHCHD4Q8N4Q1 142 aa16.53■□□□□ 0.24
COPS3-212ENST00000539941 RPLP0P6Q8NHW5 317 aa16.53■□□□□ 0.24
COPS3-212ENST00000539941 RHBDF1Q96CC6 855 aa16.53■□□□□ 0.24
COPS3-212ENST00000539941 NSUN5Q96P11 429 aaKnown RBP16.53■□□□□ 0.24
COPS3-212ENST00000539941 ZNF382Q96SR6 550 aa16.53■□□□□ 0.24
COPS3-212ENST00000539941 EGFL8Q99944 293 aa16.53■□□□□ 0.24
COPS3-212ENST00000539941 HGH1Q9BTY7 390 aa16.53■□□□□ 0.24
COPS3-212ENST00000539941 MRGBPQ9NV56 204 aa16.53■□□□□ 0.24
COPS3-212ENST00000539941 ATXN10Q9UBB4 475 aa16.53■□□□□ 0.24
COPS3-212ENST00000539941 EIF2B4Q9UI10 523 aaKnown RBP16.53■□□□□ 0.24
COPS3-212ENST00000539941 MMP17Q9ULZ9 603 aa16.53■□□□□ 0.24
COPS3-212ENST00000539941 ZFR2Q9UPR6 939 aaKnown RBP16.53■□□□□ 0.24
COPS3-212ENST00000539941 LRCH1Q9Y2L9 728 aa16.53■□□□□ 0.24
COPS3-212ENST00000539941 GMEB1Q9Y692 573 aa16.53■□□□□ 0.24
COPS3-212ENST00000539941 ANKRD12Q6UB98 2062 aa16.52■□□□□ 0.24
COPS3-212ENST00000539941 CAPN14A8MX76 684 aa16.52■□□□□ 0.23
COPS3-212ENST00000539941 GPR89AB7ZAQ6 455 aa16.52■□□□□ 0.23
COPS3-212ENST00000539941 GIPC1O14908 333 aa16.52■□□□□ 0.23
COPS3-212ENST00000539941 AZIN1O14977 448 aa16.52■□□□□ 0.23
COPS3-212ENST00000539941 HIST1H2AGP0C0S8 130 aaPredicted RBP16.52■□□□□ 0.23
COPS3-212ENST00000539941 GPR89BP0CG08 455 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms