RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 RTP2Q5QGT7 225 aa7.55□□□□□ -1.2
CCDC60-204ENST00000539847 SLX4IPQ5VYV7 408 aa7.55□□□□□ -1.2
CCDC60-204ENST00000539847 EEF1DP3Q658K8 133 aa7.55□□□□□ -1.2
CCDC60-204ENST00000539847 KIAA0930Q6ICG6 404 aaPredicted RBP7.55□□□□□ -1.2
CCDC60-204ENST00000539847 OGFOD2Q6N063 350 aa7.55□□□□□ -1.2
CCDC60-204ENST00000539847 TUBA3EQ6PEY2 450 aa7.55□□□□□ -1.2
CCDC60-204ENST00000539847 CNSTQ6PJW8 725 aa7.55□□□□□ -1.2
CCDC60-204ENST00000539847 TMEM26Q6ZUK4 368 aa7.55□□□□□ -1.2
CCDC60-204ENST00000539847 EFL1Q7Z2Z2 1120 aaKnown RBP7.55□□□□□ -1.2
CCDC60-204ENST00000539847 LIMS2Q7Z4I7 341 aa7.55□□□□□ -1.2
CCDC60-204ENST00000539847 GRASPQ7Z6J2 395 aaPredicted RBP7.55□□□□□ -1.2
CCDC60-204ENST00000539847 THAP5Q7Z6K1 395 aa7.55□□□□□ -1.2
CCDC60-204ENST00000539847 CUZD1Q86UP6 607 aa7.55□□□□□ -1.2
CCDC60-204ENST00000539847 IGFN1Q86VF2 1251 aa7.55□□□□□ -1.2
CCDC60-204ENST00000539847 GALNT13Q8IUC8 556 aa7.55□□□□□ -1.2
CCDC60-204ENST00000539847 EPHX4Q8IUS5 362 aa7.55□□□□□ -1.2
CCDC60-204ENST00000539847 LRRC49Q8IUZ0 686 aa7.55□□□□□ -1.2
CCDC60-204ENST00000539847 FUNDC1Q8IVP5 155 aa7.55□□□□□ -1.2
CCDC60-204ENST00000539847 NPAS3Q8IXF0 933 aa7.55□□□□□ -1.2
CCDC60-204ENST00000539847 DDIASQ8IXT1 998 aa7.55□□□□□ -1.2
CCDC60-204ENST00000539847 PARP8Q8N3A8 854 aa7.55□□□□□ -1.2
CCDC60-204ENST00000539847 CHCHD4Q8N4Q1 142 aa7.55□□□□□ -1.2
CCDC60-204ENST00000539847 CELF5Q8N6W0 485 aaKnown RBP7.55□□□□□ -1.2
CCDC60-204ENST00000539847 DNAAF3Q8N9W5 541 aa7.55□□□□□ -1.2
CCDC60-204ENST00000539847 C2CD4AQ8NCU7 369 aaPredicted RBP7.55□□□□□ -1.2
CCDC60-204ENST00000539847 OR52E4Q8NGH9 312 aa7.55□□□□□ -1.2
CCDC60-204ENST00000539847 BPIFB1Q8TDL5 484 aa7.55□□□□□ -1.2
CCDC60-204ENST00000539847 KCTD4Q8WVF5 259 aa7.55□□□□□ -1.2
CCDC60-204ENST00000539847 HDAC10Q969S8 669 aa7.55□□□□□ -1.2
CCDC60-204ENST00000539847 FKBP10Q96AY3 582 aa7.55□□□□□ -1.2
CCDC60-204ENST00000539847 PLD4Q96BZ4 506 aa7.55□□□□□ -1.2
CCDC60-204ENST00000539847 PGAP3Q96FM1 320 aaPredicted RBP7.55□□□□□ -1.2
CCDC60-204ENST00000539847 MSANTD3Q96H12 275 aa7.55□□□□□ -1.2
CCDC60-204ENST00000539847 PIWIL1Q96J94 861 aaKnown RBP7.55□□□□□ -1.2
CCDC60-204ENST00000539847 ELMO2Q96JJ3 720 aa7.55□□□□□ -1.2
CCDC60-204ENST00000539847 SLC2A13Q96QE2 648 aa7.55□□□□□ -1.2
CCDC60-204ENST00000539847 NPY6RQ99463 290 aa7.55□□□□□ -1.2
CCDC60-204ENST00000539847 HEPHQ9BQS7 1158 aa7.55□□□□□ -1.2
CCDC60-204ENST00000539847 DCUN1D5Q9BTE7 237 aa7.55□□□□□ -1.2
CCDC60-204ENST00000539847 MIR1-1HGQ9H1L0 117 aa7.55□□□□□ -1.2
CCDC60-204ENST00000539847 NXF3Q9H4D5 531 aaKnown RBP7.55□□□□□ -1.2
CCDC60-204ENST00000539847 RMND5AQ9H871 391 aa7.55□□□□□ -1.2
CCDC60-204ENST00000539847 SP140LQ9H930 580 aa7.55□□□□□ -1.2
CCDC60-204ENST00000539847 CPNE5Q9HCH3 593 aa7.55□□□□□ -1.2
CCDC60-204ENST00000539847 NECTIN3Q9NQS3 549 aa7.55□□□□□ -1.2
CCDC60-204ENST00000539847 SDR39U1Q9NRG7 319 aaPredicted RBP7.55□□□□□ -1.2
CCDC60-204ENST00000539847 USE1Q9NZ43 259 aa7.55□□□□□ -1.2
CCDC60-204ENST00000539847 IFT80Q9P2H3 777 aaPredicted RBP7.55□□□□□ -1.2
CCDC60-204ENST00000539847 XPR1Q9UBH6 696 aa7.55□□□□□ -1.2
CCDC60-204ENST00000539847 ANAPC2Q9UJX6 822 aa7.55□□□□□ -1.2
CCDC60-204ENST00000539847 GMEB2Q9UKD1 530 aa7.55□□□□□ -1.2
CCDC60-204ENST00000539847 MAFFQ9ULX9 164 aa7.55□□□□□ -1.2
CCDC60-204ENST00000539847 STAP1Q9ULZ2 295 aa7.55□□□□□ -1.2
CCDC60-204ENST00000539847 AP3M1Q9Y2T2 418 aa7.55□□□□□ -1.2
CCDC60-204ENST00000539847 IFT52Q9Y366 437 aa7.55□□□□□ -1.2
CCDC60-204ENST00000539847 NAALAD2Q9Y3Q0 740 aa7.55□□□□□ -1.2
CCDC60-204ENST00000539847 PCDHA9Q9Y5H5 950 aa7.55□□□□□ -1.2
CCDC60-204ENST00000539847 HEMK1Q9Y5R4 338 aaPredicted RBP7.55□□□□□ -1.2
CCDC60-204ENST00000539847 BACE2Q9Y5Z0 518 aa7.55□□□□□ -1.2
CCDC60-204ENST00000539847 FAM208BQ5VWN6 2430 aa7.54□□□□□ -1.2
CCDC60-204ENST00000539847 A0A096LPE4 126 aa7.54□□□□□ -1.2
CCDC60-204ENST00000539847 FAM95CA0A1B0GW59 222 aa7.54□□□□□ -1.2
CCDC60-204ENST00000539847 A0A1W2PPZ6 126 aa7.54□□□□□ -1.2
CCDC60-204ENST00000539847 TCRBV5S2A0A599 114 aa7.54□□□□□ -1.2
CCDC60-204ENST00000539847 FAM221AA4D161 298 aa7.54□□□□□ -1.2
CCDC60-204ENST00000539847 CENPBD1B2RD01 187 aa7.54□□□□□ -1.2
CCDC60-204ENST00000539847 F8W810 466 aa7.54□□□□□ -1.2
CCDC60-204ENST00000539847 M0QX08 132 aa7.54□□□□□ -1.2
CCDC60-204ENST00000539847 UGT2B11O75310 529 aa7.54□□□□□ -1.2
CCDC60-204ENST00000539847 GRAP2O75791 330 aa7.54□□□□□ -1.2
CCDC60-204ENST00000539847 FKBP9O95302 570 aa7.54□□□□□ -1.2
CCDC60-204ENST00000539847 PAPSS2O95340 614 aaPredicted RBP7.54□□□□□ -1.2
CCDC60-204ENST00000539847 F9P00740 461 aa7.54□□□□□ -1.2
CCDC60-204ENST00000539847 ALBP02768 609 aa7.54□□□□□ -1.2
CCDC60-204ENST00000539847 THP07101 528 aa7.54□□□□□ -1.2
CCDC60-204ENST00000539847 LTA4HP09960 611 aaKnown RBP7.54□□□□□ -1.2
CCDC60-204ENST00000539847 CCDC159P0C7I6 412 aa7.54□□□□□ -1.2
CCDC60-204ENST00000539847 TCN1P20061 433 aaPredicted RBP7.54□□□□□ -1.2
CCDC60-204ENST00000539847 ATP6V1B2P21281 511 aa7.54□□□□□ -1.2
CCDC60-204ENST00000539847 FGFR3P22607 806 aa7.54□□□□□ -1.2
CCDC60-204ENST00000539847 TGM1P22735 817 aa7.54□□□□□ -1.2
CCDC60-204ENST00000539847 SLC6A2P23975 617 aa7.54□□□□□ -1.2
CCDC60-204ENST00000539847 SERPINB10P48595 397 aa7.54□□□□□ -1.2
CCDC60-204ENST00000539847 EIF2B2P49770 351 aaKnown RBP7.54□□□□□ -1.2
CCDC60-204ENST00000539847 RGS7P49802 495 aa7.54□□□□□ -1.2
CCDC60-204ENST00000539847 ALDH3A2P51648 485 aa7.54□□□□□ -1.2
CCDC60-204ENST00000539847 SLC12A2P55011 1212 aa7.54□□□□□ -1.2
CCDC60-204ENST00000539847 KRR1Q13601 381 aaKnown RBP7.54□□□□□ -1.2
CCDC60-204ENST00000539847 UBXN2BQ14CS0 331 aa7.54□□□□□ -1.2
CCDC60-204ENST00000539847 ZBTB6Q15916 424 aa7.54□□□□□ -1.2
CCDC60-204ENST00000539847 PHKG1Q16816 387 aa7.54□□□□□ -1.2
CCDC60-204ENST00000539847 UGT3A2Q3SY77 523 aa7.54□□□□□ -1.2
CCDC60-204ENST00000539847 DCAF6Q58WW2 860 aa7.54□□□□□ -1.2
CCDC60-204ENST00000539847 TECRLQ5HYJ1 363 aa7.54□□□□□ -1.2
CCDC60-204ENST00000539847 FAM171A1Q5VUB5 890 aa7.54□□□□□ -1.2
CCDC60-204ENST00000539847 LAIR1Q6GTX8 287 aa7.54□□□□□ -1.2
CCDC60-204ENST00000539847 CES3Q6UWW8 571 aa7.54□□□□□ -1.2
CCDC60-204ENST00000539847 PRSS48Q7RTY5 328 aa7.54□□□□□ -1.2
CCDC60-204ENST00000539847 RIMKLAQ8IXN7 391 aa7.54□□□□□ -1.2
CCDC60-204ENST00000539847 DCP1BQ8IZD4 617 aaKnown RBP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms