RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 MAD2L1Q13257 205 aaPredicted RBP9.5□□□□□ -0.89
CDH13-204ENST00000539548 ACOX1Q15067 660 aa9.5□□□□□ -0.89
CDH13-204ENST00000539548 MAPKAPK3Q16644 382 aa9.5□□□□□ -0.89
CDH13-204ENST00000539548 CYP2A13Q16696 494 aa9.5□□□□□ -0.89
CDH13-204ENST00000539548 C18orf21Q32NC0 220 aaPredicted RBP9.5□□□□□ -0.89
CDH13-204ENST00000539548 RFX4Q33E94 735 aa9.5□□□□□ -0.89
CDH13-204ENST00000539548 ZRANB3Q5FWF4 1079 aa9.5□□□□□ -0.89
CDH13-204ENST00000539548 GNASQ5JWF2 1037 aa9.5□□□□□ -0.89
CDH13-204ENST00000539548 ANKRD34AQ69YU3 496 aa9.5□□□□□ -0.89
CDH13-204ENST00000539548 SPESP1Q6UW49 350 aa9.5□□□□□ -0.89
CDH13-204ENST00000539548 RNF165Q6ZSG1 346 aa9.5□□□□□ -0.89
CDH13-204ENST00000539548 NCCRP1Q6ZVX7 275 aaPredicted RBP9.5□□□□□ -0.89
CDH13-204ENST00000539548 MILR1Q7Z6M3 343 aa9.5□□□□□ -0.89
CDH13-204ENST00000539548 ZNF598Q86UK7 904 aaKnown RBP9.5□□□□□ -0.89
CDH13-204ENST00000539548 DCP2Q8IU60 420 aaKnown RBP9.5□□□□□ -0.89
CDH13-204ENST00000539548 MSRB3Q8IXL7 192 aa9.5□□□□□ -0.89
CDH13-204ENST00000539548 MICU2Q8IYU8 434 aa9.5□□□□□ -0.89
CDH13-204ENST00000539548 HS3ST5Q8IZT8 346 aa9.5□□□□□ -0.89
CDH13-204ENST00000539548 EID3Q8N140 333 aa9.5□□□□□ -0.89
CDH13-204ENST00000539548 CFAP52Q8N1V2 620 aa9.5□□□□□ -0.89
CDH13-204ENST00000539548 ZCCHC7Q8N3Z6 543 aaKnown RBP9.5□□□□□ -0.89
CDH13-204ENST00000539548 GLB1L3Q8NCI6 653 aaPredicted RBP9.5□□□□□ -0.89
CDH13-204ENST00000539548 OR7D4Q8NG98 312 aa9.5□□□□□ -0.89
CDH13-204ENST00000539548 S100ZQ8WXG8 99 aa9.5□□□□□ -0.89
CDH13-204ENST00000539548 FAM162AQ96A26 154 aa9.5□□□□□ -0.89
CDH13-204ENST00000539548 SMIM14Q96QK8 99 aa9.5□□□□□ -0.89
CDH13-204ENST00000539548 ALPK1Q96QP1 1244 aa9.5□□□□□ -0.89
CDH13-204ENST00000539548 DGCR6LQ9BY27 220 aa9.5□□□□□ -0.89
CDH13-204ENST00000539548 WDR12Q9GZL7 423 aaKnown RBP9.5□□□□□ -0.89
CDH13-204ENST00000539548 P2RY12Q9H244 342 aa9.5□□□□□ -0.89
CDH13-204ENST00000539548 TRIT1Q9H3H1 467 aaKnown RBP9.5□□□□□ -0.89
CDH13-204ENST00000539548 IKZF5Q9H5V7 419 aa9.5□□□□□ -0.89
CDH13-204ENST00000539548 ARMC7Q9H6L4 198 aa9.5□□□□□ -0.89
CDH13-204ENST00000539548 IPPKQ9H8X2 491 aa9.5□□□□□ -0.89
CDH13-204ENST00000539548 SCUBE2Q9NQ36 999 aa9.5□□□□□ -0.89
CDH13-204ENST00000539548 DCAF13Q9NV06 445 aaKnown RBP9.5□□□□□ -0.89
CDH13-204ENST00000539548 TRNAU1APQ9NX07 287 aaKnown RBP9.5□□□□□ -0.89
CDH13-204ENST00000539548 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.5□□□□□ -0.89
CDH13-204ENST00000539548 EVLQ9UI08 416 aaPredicted RBP9.5□□□□□ -0.89
CDH13-204ENST00000539548 F5H5T6 163 aa9.49□□□□□ -0.89
CDH13-204ENST00000539548 H7C0S8 307 aa9.49□□□□□ -0.89
CDH13-204ENST00000539548 M0QX08 132 aa9.49□□□□□ -0.89
CDH13-204ENST00000539548 SLC28A1O00337 649 aa9.49□□□□□ -0.89
CDH13-204ENST00000539548 STX7O15400 261 aaKnown RBP9.49□□□□□ -0.89
CDH13-204ENST00000539548 RGS14O43566 566 aa9.49□□□□□ -0.89
CDH13-204ENST00000539548 HS6ST1O60243 411 aa9.49□□□□□ -0.89
CDH13-204ENST00000539548 B4GALT3O60512 393 aa9.49□□□□□ -0.89
CDH13-204ENST00000539548 XYLBO75191 536 aa9.49□□□□□ -0.89
CDH13-204ENST00000539548 F11P03951 625 aa9.49□□□□□ -0.89
CDH13-204ENST00000539548 S100BP04271 92 aaPredicted RBP9.49□□□□□ -0.89
CDH13-204ENST00000539548 IL6P05231 212 aa9.49□□□□□ -0.89
CDH13-204ENST00000539548 CNPP09543 421 aaKnown RBP9.49□□□□□ -0.89
CDH13-204ENST00000539548 ACVR2AP27037 513 aa9.49□□□□□ -0.89
CDH13-204ENST00000539548 THPOP40225 353 aa9.49□□□□□ -0.89
CDH13-204ENST00000539548 NRIP1P48552 1158 aa9.49□□□□□ -0.89
CDH13-204ENST00000539548 RAD23AP54725 363 aa9.49□□□□□ -0.89
CDH13-204ENST00000539548 RPS3AP61247 264 aaKnown RBP9.49□□□□□ -0.89
CDH13-204ENST00000539548 TAF10Q12962 218 aa9.49□□□□□ -0.89
CDH13-204ENST00000539548 CDK5R2Q13319 367 aa9.49□□□□□ -0.89
CDH13-204ENST00000539548 LAPTM5Q13571 262 aa9.49□□□□□ -0.89
CDH13-204ENST00000539548 PON2Q15165 354 aa9.49□□□□□ -0.89
CDH13-204ENST00000539548 PLA2G4EQ3MJ16 856 aa9.49□□□□□ -0.89
CDH13-204ENST00000539548 SPRYD7Q5W111 196 aa9.49□□□□□ -0.89
CDH13-204ENST00000539548 ATG9BQ674R7 924 aa9.49□□□□□ -0.89
CDH13-204ENST00000539548 SBSNQ6UWP8 590 aa9.49□□□□□ -0.89
CDH13-204ENST00000539548 CXCL17Q6UXB2 119 aa9.49□□□□□ -0.89
CDH13-204ENST00000539548 PIWIL3Q7Z3Z3 882 aaKnown RBP9.49□□□□□ -0.89
CDH13-204ENST00000539548 TMEM179BQ7Z7N9 219 aa9.49□□□□□ -0.89
CDH13-204ENST00000539548 GPR149Q86SP6 731 aa9.49□□□□□ -0.89
CDH13-204ENST00000539548 ADAMTSL2Q86TH1 951 aa9.49□□□□□ -0.89
CDH13-204ENST00000539548 STK40Q8N2I9 435 aa9.49□□□□□ -0.89
CDH13-204ENST00000539548 MINDY2Q8NBR6 621 aa9.49□□□□□ -0.89
CDH13-204ENST00000539548 GPR152Q8TDT2 470 aa9.49□□□□□ -0.89
CDH13-204ENST00000539548 FRS2Q8WU20 508 aa9.49□□□□□ -0.89
CDH13-204ENST00000539548 FAR1Q8WVX9 515 aa9.49□□□□□ -0.89
CDH13-204ENST00000539548 ZNF641Q96N77 438 aaPredicted RBP9.49□□□□□ -0.89
CDH13-204ENST00000539548 HBEGFQ99075 208 aa9.49□□□□□ -0.89
CDH13-204ENST00000539548 ZNF408Q9H9D4 720 aa9.49□□□□□ -0.89
CDH13-204ENST00000539548 ATAD3AQ9NVI7 634 aa9.49□□□□□ -0.89
CDH13-204ENST00000539548 PAK1IP1Q9NWT1 392 aaPredicted RBP9.49□□□□□ -0.89
CDH13-204ENST00000539548 ASIC5Q9NY37 505 aa9.49□□□□□ -0.89
CDH13-204ENST00000539548 SLC25A37Q9NYZ2 338 aa9.49□□□□□ -0.89
CDH13-204ENST00000539548 TMEFF2Q9UIK5 374 aaPredicted RBP9.49□□□□□ -0.89
CDH13-204ENST00000539548 UTS2RQ9UKP6 389 aa9.49□□□□□ -0.89
CDH13-204ENST00000539548 DGKBQ9Y6T7 804 aa9.49□□□□□ -0.89
CDH13-204ENST00000539548 TRBV5-3A0A0A0MS03 114 aa9.48□□□□□ -0.89
CDH13-204ENST00000539548 KRBA1A5PL33 1030 aa9.48□□□□□ -0.89
CDH13-204ENST00000539548 ANKRD66B4E2M5 251 aa9.48□□□□□ -0.89
CDH13-204ENST00000539548 PTGES3LE9PB15 166 aa9.48□□□□□ -0.89
CDH13-204ENST00000539548 TMEM189-UBE2V1I3L0A0 370 aa9.48□□□□□ -0.89
CDH13-204ENST00000539548 CREG1O75629 220 aa9.48□□□□□ -0.89
CDH13-204ENST00000539548 GABARAPO95166 117 aa9.48□□□□□ -0.89
CDH13-204ENST00000539548 GLUD1P00367 558 aa9.48□□□□□ -0.89
CDH13-204ENST00000539548 ITGAMP11215 1152 aa9.48□□□□□ -0.89
CDH13-204ENST00000539548 AKR1A1P14550 325 aa9.48□□□□□ -0.89
CDH13-204ENST00000539548 OXCT1P55809 520 aa9.48□□□□□ -0.89
CDH13-204ENST00000539548 EMX1Q04741 257 aaPredicted RBP9.48□□□□□ -0.89
CDH13-204ENST00000539548 FAM174BQ3ZCQ3 159 aa9.48□□□□□ -0.89
CDH13-204ENST00000539548 LDLRAP1Q5SW96 308 aa9.48□□□□□ -0.89
CDH13-204ENST00000539548 CALHM3Q86XJ0 350 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms