RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 WWTR1Q9GZV5 400 aa4.2□□□□□ -1.74
CCDC7-209ENST00000539197 PANK3Q9H999 370 aa4.2□□□□□ -1.74
CCDC7-209ENST00000539197 RRP7BPQ9NSQ0 103 aa4.2□□□□□ -1.74
CCDC7-209ENST00000539197 NPAP1Q9NZP6 1156 aa4.2□□□□□ -1.74
CCDC7-209ENST00000539197 KCNE2Q9Y6J6 123 aa4.2□□□□□ -1.74
CCDC7-209ENST00000539197 SOCS3O14543 225 aa4.19□□□□□ -1.74
CCDC7-209ENST00000539197 GPC4O75487 556 aa4.19□□□□□ -1.74
CCDC7-209ENST00000539197 PRKRAO75569 313 aaKnown RBP4.19□□□□□ -1.74
CCDC7-209ENST00000539197 PRKCZQ05513 592 aa4.19□□□□□ -1.74
CCDC7-209ENST00000539197 NIPAL4Q0D2K0 466 aa4.19□□□□□ -1.74
CCDC7-209ENST00000539197 KLHL26Q53HC5 615 aa4.19□□□□□ -1.74
CCDC7-209ENST00000539197 GCNT6Q5T4J0 391 aa4.19□□□□□ -1.74
CCDC7-209ENST00000539197 GLDNQ6ZMI3 551 aaPredicted RBP4.19□□□□□ -1.74
CCDC7-209ENST00000539197 DDOQ99489 341 aa4.19□□□□□ -1.74
CCDC7-209ENST00000539197 ABHD6Q9BV23 337 aa4.19□□□□□ -1.74
CCDC7-209ENST00000539197 SMC4Q9NTJ3 1288 aa4.19□□□□□ -1.74
CCDC7-209ENST00000539197 PANK4Q9NVE7 773 aa4.19□□□□□ -1.74
CCDC7-209ENST00000539197 MYH15Q9Y2K3 1946 aa4.19□□□□□ -1.74
CCDC7-209ENST00000539197 IGHV3OR16-10A0A075B7F0 116 aa4.18□□□□□ -1.74
CCDC7-209ENST00000539197 LOC101059948A0A1B0GTJ6 334 aa4.18□□□□□ -1.74
CCDC7-209ENST00000539197 A0A1W2PN81 502 aa4.18□□□□□ -1.74
CCDC7-209ENST00000539197 A0A1W2PPH5 198 aa4.18□□□□□ -1.74
CCDC7-209ENST00000539197 ELOVL7A1L3X0 281 aa4.18□□□□□ -1.74
CCDC7-209ENST00000539197 PLEKHD1A6NEE1 506 aa4.18□□□□□ -1.74
CCDC7-209ENST00000539197 E9PI62 339 aa4.18□□□□□ -1.74
CCDC7-209ENST00000539197 CHRNA7P36544 502 aa4.18□□□□□ -1.74
CCDC7-209ENST00000539197 OPRL1P41146 370 aa4.18□□□□□ -1.74
CCDC7-209ENST00000539197 GSCP56915 257 aaPredicted RBP4.18□□□□□ -1.74
CCDC7-209ENST00000539197 NFATC2Q13469 925 aa4.18□□□□□ -1.74
CCDC7-209ENST00000539197 MED22Q15528 200 aa4.18□□□□□ -1.74
CCDC7-209ENST00000539197 ACSM2BQ68CK6 577 aa4.18□□□□□ -1.74
CCDC7-209ENST00000539197 HOGA1Q86XE5 327 aa4.18□□□□□ -1.74
CCDC7-209ENST00000539197 ARHGAP12Q8IWW6 846 aa4.18□□□□□ -1.74
CCDC7-209ENST00000539197 TMTC2Q8N394 836 aa4.18□□□□□ -1.74
CCDC7-209ENST00000539197 FRMD1Q8N878 549 aa4.18□□□□□ -1.74
CCDC7-209ENST00000539197 MAPKAPK5-AS1Q8N8E1 139 aa4.18□□□□□ -1.74
CCDC7-209ENST00000539197 NIPA2Q8N8Q9 360 aa4.18□□□□□ -1.74
CCDC7-209ENST00000539197 AZIN2Q96A70 460 aa4.18□□□□□ -1.74
CCDC7-209ENST00000539197 C1QTNF1Q9BXJ1 281 aa4.18□□□□□ -1.74
CCDC7-209ENST00000539197 FBXL17Q9UF56 701 aa4.18□□□□□ -1.74
CCDC7-209ENST00000539197 KLF2Q9Y5W3 355 aaPredicted RBP4.18□□□□□ -1.74
CCDC7-209ENST00000539197 PRSS51A0A1B0GVH4 220 aa4.17□□□□□ -1.74
CCDC7-209ENST00000539197 A6NLC8 198 aa4.17□□□□□ -1.74
CCDC7-209ENST00000539197 KLLNB2CW77 178 aa4.17□□□□□ -1.74
CCDC7-209ENST00000539197 IGKV3-15P01624 115 aa4.17□□□□□ -1.74
CCDC7-209ENST00000539197 ACTN1P12814 892 aa4.17□□□□□ -1.74
CCDC7-209ENST00000539197 CA4P22748 312 aa4.17□□□□□ -1.74
CCDC7-209ENST00000539197 NMBRP28336 390 aa4.17□□□□□ -1.74
CCDC7-209ENST00000539197 RBMS1P29558 406 aaKnown RBP4.17□□□□□ -1.74
CCDC7-209ENST00000539197 BSGP35613 385 aa4.17□□□□□ -1.74
CCDC7-209ENST00000539197 LIMK2P53671 638 aa4.17□□□□□ -1.74
CCDC7-209ENST00000539197 TBCEQ15813 527 aaPredicted RBP4.17□□□□□ -1.74
CCDC7-209ENST00000539197 KRTAP5-5Q701N2 237 aaPredicted RBP4.17□□□□□ -1.74
CCDC7-209ENST00000539197 CPSF7Q8N684 471 aaKnown RBP4.17□□□□□ -1.74
CCDC7-209ENST00000539197 ARHGAP45Q92619 1136 aa4.17□□□□□ -1.74
CCDC7-209ENST00000539197 SLCO2A1Q92959 643 aa4.17□□□□□ -1.74
CCDC7-209ENST00000539197 PDCL3Q9H2J4 239 aa4.17□□□□□ -1.74
CCDC7-209ENST00000539197 THEGQ9P2T0 379 aa4.17□□□□□ -1.74
CCDC7-209ENST00000539197 PPP1R3CQ9UQK1 317 aa4.17□□□□□ -1.74
CCDC7-209ENST00000539197 LRRFIP2Q9Y608 721 aaKnown RBP4.17□□□□□ -1.74
CCDC7-209ENST00000539197 A0A1W2PPR1 153 aa4.16□□□□□ -1.74
CCDC7-209ENST00000539197 IGHV3-13P01766 116 aa4.16□□□□□ -1.74
CCDC7-209ENST00000539197 CA6P23280 308 aa4.16□□□□□ -1.74
CCDC7-209ENST00000539197 MMP12P39900 470 aa4.16□□□□□ -1.74
CCDC7-209ENST00000539197 DMPKQ09013 629 aa4.16□□□□□ -1.74
CCDC7-209ENST00000539197 PLA2G7Q13093 441 aa4.16□□□□□ -1.74
CCDC7-209ENST00000539197 FASTKD3Q14CZ7 662 aaKnown RBP4.16□□□□□ -1.74
CCDC7-209ENST00000539197 TBC1D16Q8TBP0 767 aa4.16□□□□□ -1.74
CCDC7-209ENST00000539197 ZPLD1Q8TCW7 415 aa4.16□□□□□ -1.74
CCDC7-209ENST00000539197 C1orf74Q96LT6 269 aa4.16□□□□□ -1.74
CCDC7-209ENST00000539197 RPP25Q9BUL9 199 aaKnown RBP4.16□□□□□ -1.74
CCDC7-209ENST00000539197 PAG1Q9NWQ8 432 aa4.16□□□□□ -1.74
CCDC7-209ENST00000539197 GPR83Q9NYM4 423 aa4.16□□□□□ -1.74
CCDC7-209ENST00000539197 MUTYHQ9UIF7 546 aa4.16□□□□□ -1.74
CCDC7-209ENST00000539197 ZDHHC2Q9UIJ5 367 aa4.16□□□□□ -1.74
CCDC7-209ENST00000539197 CRYL1Q9Y2S2 319 aa4.16□□□□□ -1.74
CCDC7-209ENST00000539197 SCAMP1O15126 338 aa4.15□□□□□ -1.75
CCDC7-209ENST00000539197 BCL2L11O43521 198 aa4.15□□□□□ -1.75
CCDC7-209ENST00000539197 IDH3BO43837 385 aa4.15□□□□□ -1.75
CCDC7-209ENST00000539197 GH2P01242 217 aa4.15□□□□□ -1.75
CCDC7-209ENST00000539197 ATP1A3P13637 1013 aa4.15□□□□□ -1.75
CCDC7-209ENST00000539197 TMEM11P17152 192 aa4.15□□□□□ -1.75
CCDC7-209ENST00000539197 PNRC1Q12796 327 aaPredicted RBP4.15□□□□□ -1.75
CCDC7-209ENST00000539197 EIF4A2Q14240 407 aaKnown RBP4.15□□□□□ -1.75
CCDC7-209ENST00000539197 PCGF3Q3KNV8 242 aa4.15□□□□□ -1.75
CCDC7-209ENST00000539197 ZSCAN23Q3MJ62 389 aa4.15□□□□□ -1.75
CCDC7-209ENST00000539197 CFAP77Q6ZQR2 320 aa4.15□□□□□ -1.75
CCDC7-209ENST00000539197 HPS6Q86YV9 775 aa4.15□□□□□ -1.75
CCDC7-209ENST00000539197 DIS3L2Q8IYB7 885 aaKnown RBP4.15□□□□□ -1.75
CCDC7-209ENST00000539197 TSPYL6Q8N831 410 aa4.15□□□□□ -1.75
CCDC7-209ENST00000539197 ZNF519Q8TB69 540 aa4.15□□□□□ -1.75
CCDC7-209ENST00000539197 ETNPPLQ8TBG4 499 aa4.15□□□□□ -1.75
CCDC7-209ENST00000539197 MOAP1Q96BY2 351 aa4.15□□□□□ -1.75
CCDC7-209ENST00000539197 PREBQ9HCU5 417 aa4.15□□□□□ -1.75
CCDC7-209ENST00000539197 PNMA2Q9UL42 364 aa4.15□□□□□ -1.75
CCDC7-209ENST00000539197 EXO1Q9UQ84 846 aaKnown RBP4.15□□□□□ -1.75
CCDC7-209ENST00000539197 LAS1LQ9Y4W2 734 aaKnown RBP4.15□□□□□ -1.75
CCDC7-209ENST00000539197 RTL8CO15255 209 aa4.14□□□□□ -1.75
CCDC7-209ENST00000539197 NDUFS4O43181 175 aa4.14□□□□□ -1.75
CCDC7-209ENST00000539197 C22orf31O95567 290 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms