RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 CYP11A1P05108 521 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 FAM163BP0C2L3 166 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 EDNRBP24530 442 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 NFKB2Q00653 900 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 PCBP2Q15366 365 aaKnown RBP eCLIP5.27□□□□□ -1.572e-7■■■■□ 19.7
LRP6-203ENST00000538239 VWA5B1Q5TIE3 1220 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 TRABD2AQ86V40 505 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 PROSER1Q86XN7 944 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 OLFM1Q99784 485 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 EPS8L2Q9H6S3 715 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 LDAHQ9H6V9 325 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 NECTIN3Q9NQS3 549 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 SAR1AQ9NR31 198 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 RGS17Q9UGC6 210 aaPredicted RBP5.27□□□□□ -1.57
LRP6-203ENST00000538239 CORO1CQ9ULV4 474 aaPredicted RBP5.27□□□□□ -1.57
LRP6-203ENST00000538239 CDC14AQ9UNH5 594 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 DGKBQ9Y6T7 804 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 U3KQV3 271 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 PDPK1O15530 556 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 SERPINA6P08185 405 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 DLDP09622 509 aaKnown RBP5.27□□□□□ -1.57
LRP6-203ENST00000538239 LAMP2P13473 410 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 POLR2CP19387 275 aaPredicted RBP5.27□□□□□ -1.57
LRP6-203ENST00000538239 NRG3P56975 720 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 RPS21P63220 83 aaKnown RBP5.27□□□□□ -1.57
LRP6-203ENST00000538239 PRR5P85299 388 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 RUNX3Q13761 415 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 ZNF57Q68EA5 555 aaPredicted RBP5.27□□□□□ -1.57
LRP6-203ENST00000538239 ERN2Q76MJ5 926 aaKnown RBP5.27□□□□□ -1.57
LRP6-203ENST00000538239 TMC8Q8IU68 726 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 C8orf59Q8N0T1 100 aaPredicted RBP5.27□□□□□ -1.57
LRP6-203ENST00000538239 CENPIQ92674 756 aaPredicted RBP5.27□□□□□ -1.57
LRP6-203ENST00000538239 MR1Q95460 341 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 ZIC5Q96T25 663 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 RACGAP1Q9H0H5 632 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 MEIS3P2A8K0S8 358 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 PIP5K1BO14986 540 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 HNRNPH1P31943 449 aaKnown RBP5.27□□□□□ -1.57
LRP6-203ENST00000538239 MSX2P35548 267 aaPredicted RBP5.27□□□□□ -1.57
LRP6-203ENST00000538239 GRIA1P42261 906 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 IRF5Q13568 498 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 COL9A2Q14055 689 aaPredicted RBP5.27□□□□□ -1.57
LRP6-203ENST00000538239 ELOCQ15369 112 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 DHCR24Q15392 516 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 VPS26BQ4G0F5 336 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 WASHC2DQ5SRD0 308 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 RTL4Q6ZR62 310 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 LRRC57Q8N9N7 239 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 DCAF4L2Q8NA75 395 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 SPRTNQ9H040 489 aaPredicted RBP5.27□□□□□ -1.57
LRP6-203ENST00000538239 IL21RQ9HBE5 538 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 EIF2B3Q9NR50 452 aaKnown RBP5.27□□□□□ -1.57
LRP6-203ENST00000538239 ZNF624Q9P2J8 865 aaPredicted RBP5.27□□□□□ -1.57
LRP6-203ENST00000538239 COL2A1P02458 1487 aaPredicted RBP5.27□□□□□ -1.57
LRP6-203ENST00000538239 TCRBV7S3A2A0A539 114 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 ANKRD66B4E2M5 251 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 PLK4O00444 970 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 GABRDO14764 452 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 B4GALT2O60909 372 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 TRAPPC6AO75865 159 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 ZNF30P17039 623 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 GNAZP19086 355 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 HSD17B2P37059 387 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 NUP62P37198 522 aaPredicted RBP5.27□□□□□ -1.57
LRP6-203ENST00000538239 PCYT1AP49585 367 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 SLC34A1Q06495 639 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 DGCR6Q14129 220 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 PTPRCAPQ14761 206 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 HEPACAMQ14CZ8 416 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 ZBTB6Q15916 424 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 PAQR3Q6TCH7 311 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 RINLQ6ZS11 566 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 SLC29A4Q7RTT9 530 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 PIM3Q86V86 326 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 EIF1ADQ8N9N8 165 aaKnown RBP5.27□□□□□ -1.57
LRP6-203ENST00000538239 RORBQ92753 470 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 TSACCQ96A04 125 aaPredicted RBP5.27□□□□□ -1.57
LRP6-203ENST00000538239 TP53INP1Q96A56 240 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 SLC35G5Q96KT7 338 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 TCF12Q99081 682 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 MMADHCQ9H3L0 296 aaPredicted RBP5.27□□□□□ -1.57
LRP6-203ENST00000538239 C8orf33Q9H7E9 229 aaPredicted RBP5.27□□□□□ -1.57
LRP6-203ENST00000538239 DMTF1Q9Y222 760 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 KCTD3Q9Y597 815 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 KHNYNO15037 678 aaKnown RBP5.26□□□□□ -1.57
LRP6-203ENST00000538239 SDC3O75056 442 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 WFS1O76024 890 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 KAT7O95251 611 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 IFNGP01579 166 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 CORO7P57737 925 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 RGS8P57771 180 aaPredicted RBP5.26□□□□□ -1.57
LRP6-203ENST00000538239 LGALS3BPQ08380 585 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 LCP2Q13094 533 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 GPR33Q49SQ1 333 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 ARMCX4Q5H9R4 360 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 C11orf88Q6PI97 169 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 GALNT5Q7Z7M9 940 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 CPSF7Q8N684 471 aaKnown RBP5.26□□□□□ -1.57
LRP6-203ENST00000538239 HCFC1R1Q9NWW0 138 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 ERI3O43414 337 aaKnown RBP5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms