RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 VRK3Q8IV63 474 aa13.88□□□□□ -0.19
UBE3B-206ENST00000536398 UNC5BQ8IZJ1 945 aa13.88□□□□□ -0.19
UBE3B-206ENST00000536398 CACNA2D3Q8IZS8 1091 aa13.88□□□□□ -0.19
UBE3B-206ENST00000536398 AGGF1Q8N302 714 aaeCLIP13.88□□□□□ -0.19
UBE3B-206ENST00000536398 ACVR1CQ8NER5 493 aa13.88□□□□□ -0.19
UBE3B-206ENST00000536398 OR52E1Q8NGJ3 308 aa13.88□□□□□ -0.19
UBE3B-206ENST00000536398 OR5AR1Q8NGP9 310 aa13.88□□□□□ -0.19
UBE3B-206ENST00000536398 LCN9Q8WX39 176 aa13.88□□□□□ -0.19
UBE3B-206ENST00000536398 UBL7Q96S82 380 aaPredicted RBP13.88□□□□□ -0.19
UBE3B-206ENST00000536398 NAP1L3Q99457 506 aaPredicted RBP13.88□□□□□ -0.19
UBE3B-206ENST00000536398 IL1RAPL1Q9NZN1 696 aa13.88□□□□□ -0.19
UBE3B-206ENST00000536398 SOX13Q9UN79 622 aa13.88□□□□□ -0.19
UBE3B-206ENST00000536398 HEBP2Q9Y5Z4 205 aa13.88□□□□□ -0.19
UBE3B-206ENST00000536398 UBA6A0AVT1 1052 aaPredicted RBP13.87□□□□□ -0.19
UBE3B-206ENST00000536398 BTN3A1O00481 513 aa13.87□□□□□ -0.19
UBE3B-206ENST00000536398 LIN7AO14910 233 aaPredicted RBP13.87□□□□□ -0.19
UBE3B-206ENST00000536398 FTH1P02794 183 aa13.87□□□□□ -0.19
UBE3B-206ENST00000536398 PRB1P04280 392 aa13.87□□□□□ -0.19
UBE3B-206ENST00000536398 GSTM1P09488 218 aa13.87□□□□□ -0.19
UBE3B-206ENST00000536398 EBLN1P0CF75 366 aa13.87□□□□□ -0.19
UBE3B-206ENST00000536398 LIFP15018 202 aa13.87□□□□□ -0.19
UBE3B-206ENST00000536398 NDUFS1P28331 727 aa13.87□□□□□ -0.19
UBE3B-206ENST00000536398 GNG11P61952 73 aa13.87□□□□□ -0.19
UBE3B-206ENST00000536398 GSTM4Q03013 218 aa13.87□□□□□ -0.19
UBE3B-206ENST00000536398 KLHL35Q6PF15 583 aa13.87□□□□□ -0.19
UBE3B-206ENST00000536398 TTC9Q92623 222 aa13.87□□□□□ -0.19
UBE3B-206ENST00000536398 ANP32BQ92688 251 aaKnown RBP13.87□□□□□ -0.19
UBE3B-206ENST00000536398 SLC41A2Q96JW4 573 aa13.87□□□□□ -0.19
UBE3B-206ENST00000536398 CAPZA3Q96KX2 299 aa13.87□□□□□ -0.19
UBE3B-206ENST00000536398 TEFMQ96QE5 360 aaKnown RBP13.87□□□□□ -0.19
UBE3B-206ENST00000536398 TTC1Q99614 292 aa13.87□□□□□ -0.19
UBE3B-206ENST00000536398 DDX47Q9H0S4 455 aaKnown RBP13.87□□□□□ -0.19
UBE3B-206ENST00000536398 SRMSQ9H3Y6 488 aa13.87□□□□□ -0.19
UBE3B-206ENST00000536398 MVB12BQ9H7P6 319 aa13.87□□□□□ -0.19
UBE3B-206ENST00000536398 MRM3Q9HC36 420 aaKnown RBP13.87□□□□□ -0.19
UBE3B-206ENST00000536398 PLAGL1Q9UM63 463 aa13.87□□□□□ -0.19
UBE3B-206ENST00000536398 CDYLQ9Y232 598 aa13.87□□□□□ -0.19
UBE3B-206ENST00000536398 PCDHGA4Q9Y5G9 962 aa13.87□□□□□ -0.19
UBE3B-206ENST00000536398 PIKFYVEQ9Y2I7 2098 aa13.87□□□□□ -0.19
UBE3B-206ENST00000536398 LOC101059948A0A1B0GTJ6 334 aa13.86□□□□□ -0.19
UBE3B-206ENST00000536398 AP3B1O00203 1094 aa13.86□□□□□ -0.19
UBE3B-206ENST00000536398 QSOX1O00391 747 aa13.86□□□□□ -0.19
UBE3B-206ENST00000536398 CES2O00748 559 aa13.86□□□□□ -0.19
UBE3B-206ENST00000536398 ATXN7O15265 892 aaPredicted RBP13.86□□□□□ -0.19
UBE3B-206ENST00000536398 FANCGO15287 622 aa13.86□□□□□ -0.19
UBE3B-206ENST00000536398 TIAF1O95411 115 aa13.86□□□□□ -0.19
UBE3B-206ENST00000536398 DLGAP3O95886 979 aa13.86□□□□□ -0.19
UBE3B-206ENST00000536398 FNTAP49354 379 aa13.86□□□□□ -0.19
UBE3B-206ENST00000536398 HSPA14Q0VDF9 509 aa13.86□□□□□ -0.19
UBE3B-206ENST00000536398 SYTL3Q4VX76 610 aa13.86□□□□□ -0.19
UBE3B-206ENST00000536398 ARMC6Q6NXE6 501 aa13.86□□□□□ -0.19
UBE3B-206ENST00000536398 CASC4Q6P4E1 433 aa13.86□□□□□ -0.19
UBE3B-206ENST00000536398 ZNF449Q6P9G9 518 aa13.86□□□□□ -0.19
UBE3B-206ENST00000536398 SPNS2Q8IVW8 549 aa13.86□□□□□ -0.19
UBE3B-206ENST00000536398 OTUD6BQ8N6M0 293 aa13.86□□□□□ -0.19
UBE3B-206ENST00000536398 IL22RA1Q8N6P7 574 aa13.86□□□□□ -0.19
UBE3B-206ENST00000536398 NAT8LQ8N9F0 302 aa13.86□□□□□ -0.19
UBE3B-206ENST00000536398 LMNTD1Q8N9Z9 388 aa13.86□□□□□ -0.19
UBE3B-206ENST00000536398 SIDT2Q8NBJ9 832 aaKnown RBP13.86□□□□□ -0.19
UBE3B-206ENST00000536398 MCUQ8NE86 351 aa13.86□□□□□ -0.19
UBE3B-206ENST00000536398 UBXN4Q92575 508 aa13.86□□□□□ -0.19
UBE3B-206ENST00000536398 SERPINB12Q96P63 405 aa13.86□□□□□ -0.19
UBE3B-206ENST00000536398 ZPBPQ9BS86 351 aa13.86□□□□□ -0.19
UBE3B-206ENST00000536398 P2RY12Q9H244 342 aa13.86□□□□□ -0.19
UBE3B-206ENST00000536398 TFB2MQ9H5Q4 396 aaKnown RBP13.86□□□□□ -0.19
UBE3B-206ENST00000536398 ANAPC5Q9UJX4 755 aa13.86□□□□□ -0.19
UBE3B-206ENST00000536398 ICKQ9UPZ9 632 aa13.86□□□□□ -0.19
UBE3B-206ENST00000536398 ASF1AQ9Y294 204 aa13.86□□□□□ -0.19
UBE3B-206ENST00000536398 TMEM184BQ9Y519 407 aaPredicted RBP13.86□□□□□ -0.19
UBE3B-206ENST00000536398 GSAPA4D1B5 854 aa13.85□□□□□ -0.19
UBE3B-206ENST00000536398 TLCD2A6NGC4 264 aa13.85□□□□□ -0.19
UBE3B-206ENST00000536398 SLC9B1P1A6NJY1 282 aa13.85□□□□□ -0.19
UBE3B-206ENST00000536398 PRMT5O14744 637 aaPredicted RBP13.85□□□□□ -0.19
UBE3B-206ENST00000536398 GPC4O75487 556 aa13.85□□□□□ -0.19
UBE3B-206ENST00000536398 NDUFS3O75489 264 aa13.85□□□□□ -0.19
UBE3B-206ENST00000536398 SPAG6O75602 509 aa13.85□□□□□ -0.19
UBE3B-206ENST00000536398 KIAA0754O94854 1291 aa13.85□□□□□ -0.19
UBE3B-206ENST00000536398 AOAHP28039 575 aa13.85□□□□□ -0.19
UBE3B-206ENST00000536398 PRDX3P30048 256 aaKnown RBP13.85□□□□□ -0.19
UBE3B-206ENST00000536398 FMO4P31512 558 aa13.85□□□□□ -0.19
UBE3B-206ENST00000536398 PTGIRP43119 386 aa13.85□□□□□ -0.19
UBE3B-206ENST00000536398 TTPAP49638 278 aa13.85□□□□□ -0.19
UBE3B-206ENST00000536398 ATP1A2P50993 1020 aa13.85□□□□□ -0.19
UBE3B-206ENST00000536398 SARNPP82979 210 aaKnown RBP13.85□□□□□ -0.19
UBE3B-206ENST00000536398 ABRQ12979 859 aa13.85□□□□□ -0.19
UBE3B-206ENST00000536398 IL11RAQ14626 422 aa13.85□□□□□ -0.19
UBE3B-206ENST00000536398 AARS2Q5JTZ9 985 aaKnown RBP13.85□□□□□ -0.19
UBE3B-206ENST00000536398 CTSL3PQ5NE16 218 aa13.85□□□□□ -0.19
UBE3B-206ENST00000536398 UNC5AQ6ZN44 842 aa13.85□□□□□ -0.19
UBE3B-206ENST00000536398 AMIGO1Q86WK6 493 aa13.85□□□□□ -0.19
UBE3B-206ENST00000536398 RASGRP3Q8IV61 690 aa13.85□□□□□ -0.19
UBE3B-206ENST00000536398 ADGRF3Q8IZF5 1079 aa13.85□□□□□ -0.19
UBE3B-206ENST00000536398 NLGN4XQ8N0W4 816 aa13.85□□□□□ -0.19
UBE3B-206ENST00000536398 D2HGDHQ8N465 521 aa13.85□□□□□ -0.19
UBE3B-206ENST00000536398 GALNT6Q8NCL4 622 aa13.85□□□□□ -0.19
UBE3B-206ENST00000536398 NLGN4YQ8NFZ3 816 aaPredicted RBP13.85□□□□□ -0.19
UBE3B-206ENST00000536398 SLC39A7Q92504 469 aa13.85□□□□□ -0.19
UBE3B-206ENST00000536398 CD180Q99467 661 aa13.85□□□□□ -0.19
UBE3B-206ENST00000536398 CARD6Q9BX69 1037 aa13.85□□□□□ -0.19
UBE3B-206ENST00000536398 ULBP3Q9BZM4 244 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms