RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 MPP1Q00013 466 aa13.22□□□□□ -0.29
RPAIN-205ENST00000536255 EIF3IQ13347 325 aaKnown RBP13.22□□□□□ -0.29
RPAIN-205ENST00000536255 KRT33BQ14525 404 aa13.22□□□□□ -0.29
RPAIN-205ENST00000536255 RPE65Q16518 533 aa13.22□□□□□ -0.29
RPAIN-205ENST00000536255 ZNF658BQ4V348 819 aaPredicted RBP13.22□□□□□ -0.29
RPAIN-205ENST00000536255 CTSL3PQ5NE16 218 aa13.22□□□□□ -0.29
RPAIN-205ENST00000536255 TEX35Q5T0J7 233 aa13.22□□□□□ -0.29
RPAIN-205ENST00000536255 TEDDM1Q5T9Z0 273 aa13.22□□□□□ -0.29
RPAIN-205ENST00000536255 NKAIN2Q5VXU1 208 aa13.22□□□□□ -0.29
RPAIN-205ENST00000536255 TRMT10BQ6PF06 316 aaKnown RBP13.22□□□□□ -0.29
RPAIN-205ENST00000536255 CAPN12Q6ZSI9 719 aa13.22□□□□□ -0.29
RPAIN-205ENST00000536255 C3orf62Q6ZUJ4 267 aa13.22□□□□□ -0.29
RPAIN-205ENST00000536255 USP53Q70EK8 1073 aa13.22□□□□□ -0.29
RPAIN-205ENST00000536255 RAB11FIP2Q7L804 512 aa13.22□□□□□ -0.29
RPAIN-205ENST00000536255 OR10G6Q8NH81 332 aa13.22□□□□□ -0.29
RPAIN-205ENST00000536255 PRR11Q96HE9 360 aaPredicted RBP13.22□□□□□ -0.29
RPAIN-205ENST00000536255 AHCYL2Q96HN2 611 aaKnown RBP13.22□□□□□ -0.29
RPAIN-205ENST00000536255 C12orf66Q96MD2 445 aa13.22□□□□□ -0.29
RPAIN-205ENST00000536255 OR52A5Q9H2C5 316 aa13.22□□□□□ -0.29
RPAIN-205ENST00000536255 SEMA6CQ9H3T2 930 aa13.22□□□□□ -0.29
RPAIN-205ENST00000536255 EPB41L1Q9H4G0 881 aa13.22□□□□□ -0.29
RPAIN-205ENST00000536255 PLAC1Q9HBJ0 212 aa13.22□□□□□ -0.29
RPAIN-205ENST00000536255 ASCL3Q9NQ33 180 aa13.22□□□□□ -0.29
RPAIN-205ENST00000536255 IMP3Q9NV31 184 aaKnown RBP13.22□□□□□ -0.29
RPAIN-205ENST00000536255 ZNF624Q9P2J8 865 aaPredicted RBP13.22□□□□□ -0.29
RPAIN-205ENST00000536255 CORO1CQ9ULV4 474 aaPredicted RBP13.22□□□□□ -0.29
RPAIN-205ENST00000536255 COLEC10Q9Y6Z7 277 aa13.22□□□□□ -0.29
RPAIN-205ENST00000536255 ANKRD11Q6UB99 2663 aaPredicted RBP13.21□□□□□ -0.29
RPAIN-205ENST00000536255 CELSR3Q9NYQ7 3312 aa13.21□□□□□ -0.29
RPAIN-205ENST00000536255 SLC5A10A0PJK1 596 aa13.21□□□□□ -0.29
RPAIN-205ENST00000536255 LILRA5A6NI73 299 aa13.21□□□□□ -0.29
RPAIN-205ENST00000536255 IQCF5A8MTL0 148 aa13.21□□□□□ -0.29
RPAIN-205ENST00000536255 PLD2O14939 933 aa13.21□□□□□ -0.29
RPAIN-205ENST00000536255 TLX3O43711 291 aaPredicted RBP13.21□□□□□ -0.29
RPAIN-205ENST00000536255 DUX1O43812 170 aa13.21□□□□□ -0.29
RPAIN-205ENST00000536255 HAUS5O94927 633 aa13.21□□□□□ -0.29
RPAIN-205ENST00000536255 MTHFD1P11586 935 aaKnown RBP13.21□□□□□ -0.29
RPAIN-205ENST00000536255 AOAHP28039 575 aa13.21□□□□□ -0.29
RPAIN-205ENST00000536255 RBMS1P29558 406 aaKnown RBP13.21□□□□□ -0.29
RPAIN-205ENST00000536255 SSTR1P30872 391 aa13.21□□□□□ -0.29
RPAIN-205ENST00000536255 CCR7P32248 378 aa13.21□□□□□ -0.29
RPAIN-205ENST00000536255 CSF2RBP32927 897 aa13.21□□□□□ -0.29
RPAIN-205ENST00000536255 PHBP35232 272 aa13.21□□□□□ -0.29
RPAIN-205ENST00000536255 PREPP48147 710 aa13.21□□□□□ -0.29
RPAIN-205ENST00000536255 PPM1FP49593 454 aaPredicted RBP13.21□□□□□ -0.29
RPAIN-205ENST00000536255 EPHA4P54764 986 aa13.21□□□□□ -0.29
RPAIN-205ENST00000536255 ERVPABLB-1P60509 514 aa13.21□□□□□ -0.29
RPAIN-205ENST00000536255 HSPA14Q0VDF9 509 aa13.21□□□□□ -0.29
RPAIN-205ENST00000536255 BRD3Q15059 726 aa13.21□□□□□ -0.29
RPAIN-205ENST00000536255 ZNF789Q5FWF6 425 aa13.21□□□□□ -0.29
RPAIN-205ENST00000536255 PLEKHS1Q5SXH7 462 aa13.21□□□□□ -0.29
RPAIN-205ENST00000536255 PHF19Q5T6S3 580 aa13.21□□□□□ -0.29
RPAIN-205ENST00000536255 CAPRIN2Q6IMN6 1127 aaKnown RBP13.21□□□□□ -0.29
RPAIN-205ENST00000536255 UGT3A1Q6NUS8 523 aa13.21□□□□□ -0.29
RPAIN-205ENST00000536255 FOXR1Q6PIV2 292 aa13.21□□□□□ -0.29
RPAIN-205ENST00000536255 ZNF574Q6ZN55 896 aaPredicted RBP13.21□□□□□ -0.29
RPAIN-205ENST00000536255 TMEM26Q6ZUK4 368 aa13.21□□□□□ -0.29
RPAIN-205ENST00000536255 PDZD3Q86UT5 571 aa13.21□□□□□ -0.29
RPAIN-205ENST00000536255 SLC26A11Q86WA9 606 aa13.21□□□□□ -0.29
RPAIN-205ENST00000536255 RELL1Q8IUW5 271 aa13.21□□□□□ -0.29
RPAIN-205ENST00000536255 KRT222Q8N1A0 295 aa13.21□□□□□ -0.29
RPAIN-205ENST00000536255 LILRA3Q8N6C8 439 aaPredicted RBP13.21□□□□□ -0.29
RPAIN-205ENST00000536255 OR4D9Q8NGE8 314 aa13.21□□□□□ -0.29
RPAIN-205ENST00000536255 SNIP1Q8TAD8 396 aaKnown RBP13.21□□□□□ -0.29
RPAIN-205ENST00000536255 ZFPM2Q8WW38 1151 aa13.21□□□□□ -0.29
RPAIN-205ENST00000536255 KCNJ9Q92806 393 aa13.21□□□□□ -0.29
RPAIN-205ENST00000536255 FGF11Q92914 225 aa13.21□□□□□ -0.29
RPAIN-205ENST00000536255 C9orf72Q96LT7 481 aa13.21□□□□□ -0.29
RPAIN-205ENST00000536255 RMDN2Q96LZ7 410 aa13.21□□□□□ -0.29
RPAIN-205ENST00000536255 ZNF578Q96N58 590 aaPredicted RBP13.21□□□□□ -0.29
RPAIN-205ENST00000536255 SLC46A1Q96NT5 459 aa13.21□□□□□ -0.29
RPAIN-205ENST00000536255 INSM2Q96T92 566 aaPredicted RBP13.21□□□□□ -0.29
RPAIN-205ENST00000536255 DPYSL5Q9BPU6 564 aa13.21□□□□□ -0.29
RPAIN-205ENST00000536255 ZMYND15Q9H091 742 aa13.21□□□□□ -0.29
RPAIN-205ENST00000536255 THSD1Q9NS62 852 aa13.21□□□□□ -0.29
RPAIN-205ENST00000536255 TXNDC16Q9P2K2 825 aa13.21□□□□□ -0.29
RPAIN-205ENST00000536255 KLHL42Q9P2K6 505 aa13.21□□□□□ -0.29
RPAIN-205ENST00000536255 PIKFYVEQ9Y2I7 2098 aa13.2□□□□□ -0.3
RPAIN-205ENST00000536255 IGHV5-10-1A0A0J9YXX1 117 aa13.2□□□□□ -0.3
RPAIN-205ENST00000536255 TCRBV9S1A1TA0A576 114 aa13.2□□□□□ -0.3
RPAIN-205ENST00000536255 VPS26AO75436 327 aa13.2□□□□□ -0.3
RPAIN-205ENST00000536255 GPC4O75487 556 aa13.2□□□□□ -0.3
RPAIN-205ENST00000536255 SLCO2B1O94956 709 aa13.2□□□□□ -0.3
RPAIN-205ENST00000536255 TNFSF15O95150 251 aa13.2□□□□□ -0.3
RPAIN-205ENST00000536255 SLU7O95391 586 aaKnown RBP13.2□□□□□ -0.3
RPAIN-205ENST00000536255 AHSGP02765 367 aa13.2□□□□□ -0.3
RPAIN-205ENST00000536255 RPN2P04844 631 aa13.2□□□□□ -0.3
RPAIN-205ENST00000536255 ITGA2BP08514 1039 aa13.2□□□□□ -0.3
RPAIN-205ENST00000536255 HOXB3P14651 431 aaPredicted RBP13.2□□□□□ -0.3
RPAIN-205ENST00000536255 PDHA2P29803 388 aa13.2□□□□□ -0.3
RPAIN-205ENST00000536255 MLLT3P42568 568 aaPredicted RBP13.2□□□□□ -0.3
RPAIN-205ENST00000536255 CFHR1Q03591 330 aa13.2□□□□□ -0.3
RPAIN-205ENST00000536255 SLMAPQ14BN4 828 aa13.2□□□□□ -0.3
RPAIN-205ENST00000536255 TTLL9Q3SXZ7 439 aa13.2□□□□□ -0.3
RPAIN-205ENST00000536255 CNSTQ6PJW8 725 aa13.2□□□□□ -0.3
RPAIN-205ENST00000536255 XKR5Q6UX68 686 aa13.2□□□□□ -0.3
RPAIN-205ENST00000536255 SLC22A15Q8IZD6 547 aa13.2□□□□□ -0.3
RPAIN-205ENST00000536255 FBXO39Q8N4B4 442 aa13.2□□□□□ -0.3
RPAIN-205ENST00000536255 EIF1ADQ8N9N8 165 aaKnown RBP13.2□□□□□ -0.3
RPAIN-205ENST00000536255 LRRN4CLQ8ND94 238 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms