RNA–Protein interactions for RNA: ENST00000534656.2

CCDC84-208, Transcript of coiled-coil domain containing 84, humanhuman

TSL 2

Gene CCDC84, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-208ENST00000534656 NCF4Q15080 339 aa13.47□□□□□ -0.25
CCDC84-208ENST00000534656 PTCHD3Q3KNS1 767 aa13.47□□□□□ -0.25
CCDC84-208ENST00000534656 RANBP10Q6VN20 620 aa13.47□□□□□ -0.25
CCDC84-208ENST00000534656 RAB43Q86YS6 212 aa13.47□□□□□ -0.25
CCDC84-208ENST00000534656 PRR7Q8TB68 274 aa13.47□□□□□ -0.25
CCDC84-208ENST00000534656 ULK4Q96C45 1275 aa13.47□□□□□ -0.25
CCDC84-208ENST00000534656 SGSM3Q96HU1 749 aa13.47□□□□□ -0.25
CCDC84-208ENST00000534656 TRAPPC9Q96Q05 1148 aa13.47□□□□□ -0.25
CCDC84-208ENST00000534656 GORASP1Q9BQQ3 440 aa13.47□□□□□ -0.25
CCDC84-208ENST00000534656 SLC7A5P2Q9GIP4 190 aa13.47□□□□□ -0.25
CCDC84-208ENST00000534656 GBA3Q9H227 469 aa13.47□□□□□ -0.25
CCDC84-208ENST00000534656 TFB2MQ9H5Q4 396 aaKnown RBP13.47□□□□□ -0.25
CCDC84-208ENST00000534656 C5AR2Q9P296 337 aa13.47□□□□□ -0.25
CCDC84-208ENST00000534656 CRLS1Q9UJA2 301 aa13.47□□□□□ -0.25
CCDC84-208ENST00000534656 ALG6Q9Y672 507 aa13.47□□□□□ -0.25
CCDC84-208ENST00000534656 C9J4A7 227 aa13.46□□□□□ -0.25
CCDC84-208ENST00000534656 E7EQ34 232 aa13.46□□□□□ -0.25
CCDC84-208ENST00000534656 ZNF749O43361 778 aa13.46□□□□□ -0.25
CCDC84-208ENST00000534656 ATP1B2P14415 290 aaPredicted RBP13.46□□□□□ -0.25
CCDC84-208ENST00000534656 AGXTP21549 392 aa13.46□□□□□ -0.25
CCDC84-208ENST00000534656 RBL1P28749 1068 aa13.46□□□□□ -0.25
CCDC84-208ENST00000534656 ADRA1AP35348 466 aa13.46□□□□□ -0.25
CCDC84-208ENST00000534656 CD151P48509 253 aa13.46□□□□□ -0.25
CCDC84-208ENST00000534656 MSLNQ13421 630 aaPredicted RBP13.46□□□□□ -0.25
CCDC84-208ENST00000534656 ZNF385CQ66K41 422 aaPredicted RBP13.46□□□□□ -0.25
CCDC84-208ENST00000534656 CDHR3Q6ZTQ4 885 aa13.46□□□□□ -0.25
CCDC84-208ENST00000534656 KATNAL2Q8IYT4 538 aa13.46□□□□□ -0.25
CCDC84-208ENST00000534656 RCOR2Q8IZ40 523 aa13.46□□□□□ -0.25
CCDC84-208ENST00000534656 NXPE1Q8N323 547 aa13.46□□□□□ -0.25
CCDC84-208ENST00000534656 OR13C4Q8NGS5 318 aa13.46□□□□□ -0.25
CCDC84-208ENST00000534656 HEXDCQ8WVB3 486 aa13.46□□□□□ -0.25
CCDC84-208ENST00000534656 C19orf60Q96EN9 201 aa13.46□□□□□ -0.25
CCDC84-208ENST00000534656 RBM41Q96IZ5 413 aaKnown RBP13.46□□□□□ -0.25
CCDC84-208ENST00000534656 IP6K3Q96PC2 410 aa13.46□□□□□ -0.25
CCDC84-208ENST00000534656 COPS8Q99627 209 aa13.46□□□□□ -0.25
CCDC84-208ENST00000534656 NRTNQ99748 197 aa13.46□□□□□ -0.25
CCDC84-208ENST00000534656 C19orf43Q9BQ61 176 aa13.46□□□□□ -0.25
CCDC84-208ENST00000534656 DHRS4Q9BTZ2 278 aa13.46□□□□□ -0.25
CCDC84-208ENST00000534656 OR52A5Q9H2C5 316 aa13.46□□□□□ -0.25
CCDC84-208ENST00000534656 COG4Q9H9E3 785 aa13.46□□□□□ -0.25
CCDC84-208ENST00000534656 PADI2Q9Y2J8 665 aa13.46□□□□□ -0.25
CCDC84-208ENST00000534656 SHANK1Q9Y566 2161 aa13.46□□□□□ -0.25
CCDC84-208ENST00000534656 MED13Q9UHV7 2174 aa13.45□□□□□ -0.26
CCDC84-208ENST00000534656 ICE1Q9Y2F5 2266 aa13.45□□□□□ -0.26
CCDC84-208ENST00000534656 PCSK5Q92824 1860 aa13.45□□□□□ -0.26
CCDC84-208ENST00000534656 WIPF3A6NGB9 483 aa13.45□□□□□ -0.26
CCDC84-208ENST00000534656 C2orf74A8MZ97 194 aa13.45□□□□□ -0.26
CCDC84-208ENST00000534656 CFAP99D6REC4 459 aa13.45□□□□□ -0.26
CCDC84-208ENST00000534656 IFRD1O00458 451 aaPredicted RBP13.45□□□□□ -0.26
CCDC84-208ENST00000534656 KRT86O43790 486 aa13.45□□□□□ -0.26
CCDC84-208ENST00000534656 KLF7O75840 302 aaPredicted RBP13.45□□□□□ -0.26
CCDC84-208ENST00000534656 CRTAMO95727 393 aa13.45□□□□□ -0.26
CCDC84-208ENST00000534656 TPM1P09493 284 aa13.45□□□□□ -0.26
CCDC84-208ENST00000534656 PVRP15151 417 aa13.45□□□□□ -0.26
CCDC84-208ENST00000534656 HADHAP40939 763 aa13.45□□□□□ -0.26
CCDC84-208ENST00000534656 HADHBP55084 474 aaKnown RBP13.45□□□□□ -0.26
CCDC84-208ENST00000534656 OLIG2Q13516 323 aa13.45□□□□□ -0.26
CCDC84-208ENST00000534656 RAPSNQ13702 412 aa13.45□□□□□ -0.26
CCDC84-208ENST00000534656 SSPNQ14714 243 aa13.45□□□□□ -0.26
CCDC84-208ENST00000534656 PLEKHN1Q494U1 663 aaPredicted RBP13.45□□□□□ -0.26
CCDC84-208ENST00000534656 ZNF658BQ4V348 819 aaPredicted RBP13.45□□□□□ -0.26
CCDC84-208ENST00000534656 VWA5B1Q5TIE3 1220 aa13.45□□□□□ -0.26
CCDC84-208ENST00000534656 ITPRIPL1Q6GPH6 555 aa13.45□□□□□ -0.26
CCDC84-208ENST00000534656 SARM1Q6SZW1 724 aa13.45□□□□□ -0.26
CCDC84-208ENST00000534656 MAMDC2Q7Z304 686 aaPredicted RBP13.45□□□□□ -0.26
CCDC84-208ENST00000534656 SNX20Q7Z614 316 aa13.45□□□□□ -0.26
CCDC84-208ENST00000534656 AMIGO1Q86WK6 493 aa13.45□□□□□ -0.26
CCDC84-208ENST00000534656 CCDC50Q8IVM0 306 aa13.45□□□□□ -0.26
CCDC84-208ENST00000534656 ADGRF3Q8IZF5 1079 aa13.45□□□□□ -0.26
CCDC84-208ENST00000534656 IQCKQ8N0W5 287 aa13.45□□□□□ -0.26
CCDC84-208ENST00000534656 PHC3Q8NDX5 983 aa13.45□□□□□ -0.26
CCDC84-208ENST00000534656 OR52E1Q8NGJ3 308 aa13.45□□□□□ -0.26
CCDC84-208ENST00000534656 SNRNP40Q96DI7 357 aaKnown RBP13.45□□□□□ -0.26
CCDC84-208ENST00000534656 APOL2Q9BQE5 337 aa13.45□□□□□ -0.26
CCDC84-208ENST00000534656 KLHL25Q9H0H3 589 aa13.45□□□□□ -0.26
CCDC84-208ENST00000534656 FAM96AQ9H5X1 160 aa13.45□□□□□ -0.26
CCDC84-208ENST00000534656 MVB12BQ9H7P6 319 aa13.45□□□□□ -0.26
CCDC84-208ENST00000534656 C10orf88Q9H8K7 445 aa13.45□□□□□ -0.26
CCDC84-208ENST00000534656 AAR2Q9Y312 384 aaKnown RBP13.45□□□□□ -0.26
CCDC84-208ENST00000534656 H7C0C1 242 aa13.44□□□□□ -0.26
CCDC84-208ENST00000534656 APOC4-APOC2K7ER74 178 aa13.44□□□□□ -0.26
CCDC84-208ENST00000534656 CBFA2T2O43439 604 aa13.44□□□□□ -0.26
CCDC84-208ENST00000534656 MFAP3LO75121 409 aa13.44□□□□□ -0.26
CCDC84-208ENST00000534656 CBX6O95503 412 aa13.44□□□□□ -0.26
CCDC84-208ENST00000534656 APOC2P02655 101 aa13.44□□□□□ -0.26
CCDC84-208ENST00000534656 ITGALP20701 1170 aa13.44□□□□□ -0.26
CCDC84-208ENST00000534656 PDHA2P29803 388 aa13.44□□□□□ -0.26
CCDC84-208ENST00000534656 OTX2P32243 289 aa13.44□□□□□ -0.26
CCDC84-208ENST00000534656 ATP5OP48047 213 aa13.44□□□□□ -0.26
CCDC84-208ENST00000534656 ZNF140P52738 457 aaPredicted RBP13.44□□□□□ -0.26
CCDC84-208ENST00000534656 TMPRSS15P98073 1019 aa13.44□□□□□ -0.26
CCDC84-208ENST00000534656 NR6A1Q15406 480 aa13.44□□□□□ -0.26
CCDC84-208ENST00000534656 KYNUQ16719 465 aa13.44□□□□□ -0.26
CCDC84-208ENST00000534656 GPR33Q49SQ1 333 aa13.44□□□□□ -0.26
CCDC84-208ENST00000534656 ZNF449Q6P9G9 518 aa13.44□□□□□ -0.26
CCDC84-208ENST00000534656 BBS12Q6ZW61 710 aa13.44□□□□□ -0.26
CCDC84-208ENST00000534656 MRGPREQ86SM8 312 aa13.44□□□□□ -0.26
CCDC84-208ENST00000534656 GPR135Q8IZ08 494 aa13.44□□□□□ -0.26
CCDC84-208ENST00000534656 TCTN2Q96GX1 697 aa13.44□□□□□ -0.26
CCDC84-208ENST00000534656 FER1L6-AS2Q96M78 137 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms