RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 KIAA0754O94854 1291 aa13.67□□□□□ -0.22
SF3B2-215ENST00000534307 GOT2P00505 430 aaKnown RBP13.67□□□□□ -0.22
SF3B2-215ENST00000534307 F8A1P23610 371 aa13.67□□□□□ -0.22
SF3B2-215ENST00000534307 TUBB3Q13509 450 aa13.67□□□□□ -0.22
SF3B2-215ENST00000534307 BOP1Q14137 746 aaKnown RBP13.67□□□□□ -0.22
SF3B2-215ENST00000534307 GSE1Q14687 1217 aa13.67□□□□□ -0.22
SF3B2-215ENST00000534307 AFTPHQ6ULP2 937 aa13.67□□□□□ -0.22
SF3B2-215ENST00000534307 NLRP9Q7RTR0 991 aa13.67□□□□□ -0.22
SF3B2-215ENST00000534307 PPP1R3BQ86XI6 285 aa13.67□□□□□ -0.22
SF3B2-215ENST00000534307 PRELID2Q8N945 189 aa13.67□□□□□ -0.22
SF3B2-215ENST00000534307 PPM1MQ96MI6 270 aa13.67□□□□□ -0.22
SF3B2-215ENST00000534307 NRTNQ99748 197 aa13.67□□□□□ -0.22
SF3B2-215ENST00000534307 TFB2MQ9H5Q4 396 aaKnown RBP13.67□□□□□ -0.22
SF3B2-215ENST00000534307 POMT2Q9UKY4 750 aa13.67□□□□□ -0.22
SF3B2-215ENST00000534307 HEMK1Q9Y5R4 338 aaPredicted RBP13.67□□□□□ -0.22
SF3B2-215ENST00000534307 RPS6KL1Q9Y6S9 549 aa13.67□□□□□ -0.22
SF3B2-215ENST00000534307 ITPR2Q14571 2701 aa13.67□□□□□ -0.22
SF3B2-215ENST00000534307 SLC5A10A0PJK1 596 aa13.66□□□□□ -0.22
SF3B2-215ENST00000534307 QSOX1O00391 747 aa13.66□□□□□ -0.22
SF3B2-215ENST00000534307 LIN7AO14910 233 aaPredicted RBP13.66□□□□□ -0.22
SF3B2-215ENST00000534307 OR1I1O60431 355 aa13.66□□□□□ -0.22
SF3B2-215ENST00000534307 ZBTB11O95625 1053 aaPredicted RBP13.66□□□□□ -0.22
SF3B2-215ENST00000534307 GAS8O95995 478 aa13.66□□□□□ -0.22
SF3B2-215ENST00000534307 NTRK1P04629 796 aa13.66□□□□□ -0.22
SF3B2-215ENST00000534307 FAM87AP0C7U9 286 aa13.66□□□□□ -0.22
SF3B2-215ENST00000534307 EBLN1P0CF75 366 aa13.66□□□□□ -0.22
SF3B2-215ENST00000534307 ITGB6P18564 788 aa13.66□□□□□ -0.22
SF3B2-215ENST00000534307 ACADLP28330 430 aa13.66□□□□□ -0.22
SF3B2-215ENST00000534307 CXCR5P32302 372 aa13.66□□□□□ -0.22
SF3B2-215ENST00000534307 KCNJ1P48048 391 aa13.66□□□□□ -0.22
SF3B2-215ENST00000534307 LMAN1P49257 510 aa13.66□□□□□ -0.22
SF3B2-215ENST00000534307 HSD11B2P80365 405 aa13.66□□□□□ -0.22
SF3B2-215ENST00000534307 NFKB2Q00653 900 aa13.66□□□□□ -0.22
SF3B2-215ENST00000534307 SEMA3AQ14563 771 aa13.66□□□□□ -0.22
SF3B2-215ENST00000534307 CRTC2Q53ET0 693 aaPredicted RBP13.66□□□□□ -0.22
SF3B2-215ENST00000534307 LYPLAL1Q5VWZ2 237 aa13.66□□□□□ -0.22
SF3B2-215ENST00000534307 PWWP2BQ6NUJ5 590 aa13.66□□□□□ -0.22
SF3B2-215ENST00000534307 CYB5D1Q6P9G0 228 aa13.66□□□□□ -0.22
SF3B2-215ENST00000534307 C6orf15Q6UXA7 325 aaPredicted RBP13.66□□□□□ -0.22
SF3B2-215ENST00000534307 C4orf22Q6V702 233 aa13.66□□□□□ -0.22
SF3B2-215ENST00000534307 RASGRP3Q8IV61 690 aa13.66□□□□□ -0.22
SF3B2-215ENST00000534307 SIDT2Q8NBJ9 832 aaKnown RBP13.66□□□□□ -0.22
SF3B2-215ENST00000534307 GALNT6Q8NCL4 622 aa13.66□□□□□ -0.22
SF3B2-215ENST00000534307 OR4E2Q8NGC2 313 aa13.66□□□□□ -0.22
SF3B2-215ENST00000534307 OR4L1Q8NH43 312 aa13.66□□□□□ -0.22
SF3B2-215ENST00000534307 LCN9Q8WX39 176 aa13.66□□□□□ -0.22
SF3B2-215ENST00000534307 TFGQ92734 400 aaPredicted RBP13.66□□□□□ -0.22
SF3B2-215ENST00000534307 KIAA1143Q96AT1 154 aaPredicted RBP13.66□□□□□ -0.22
SF3B2-215ENST00000534307 RNF31Q96EP0 1072 aa13.66□□□□□ -0.22
SF3B2-215ENST00000534307 ELMO2Q96JJ3 720 aa13.66□□□□□ -0.22
SF3B2-215ENST00000534307 FCRL4Q96PJ5 515 aa13.66□□□□□ -0.22
SF3B2-215ENST00000534307 EFHD1Q9BUP0 239 aa13.66□□□□□ -0.22
SF3B2-215ENST00000534307 PITPNM3Q9BZ71 974 aa13.66□□□□□ -0.22
SF3B2-215ENST00000534307 FAM117AQ9C073 453 aa13.66□□□□□ -0.22
SF3B2-215ENST00000534307 TWSG1Q9GZX9 223 aa13.66□□□□□ -0.22
SF3B2-215ENST00000534307 MVB12BQ9H7P6 319 aa13.66□□□□□ -0.22
SF3B2-215ENST00000534307 PDE7BQ9NP56 450 aa13.66□□□□□ -0.22
SF3B2-215ENST00000534307 TREX1Q9NSU2 369 aa13.66□□□□□ -0.22
SF3B2-215ENST00000534307 BTRCQ9Y297 605 aa13.66□□□□□ -0.22
SF3B2-215ENST00000534307 UBA6A0AVT1 1052 aaPredicted RBP13.65□□□□□ -0.22
SF3B2-215ENST00000534307 BHMG1C9JSJ3 638 aaPredicted RBP13.65□□□□□ -0.22
SF3B2-215ENST00000534307 MATN2O00339 956 aa13.65□□□□□ -0.22
SF3B2-215ENST00000534307 IFRD1O00458 451 aaPredicted RBP13.65□□□□□ -0.22
SF3B2-215ENST00000534307 BTN3A3O00478 584 aa13.65□□□□□ -0.22
SF3B2-215ENST00000534307 BTN3A1O00481 513 aa13.65□□□□□ -0.22
SF3B2-215ENST00000534307 NKX2-8O15522 239 aa13.65□□□□□ -0.22
SF3B2-215ENST00000534307 CEP104O60308 925 aa13.65□□□□□ -0.22
SF3B2-215ENST00000534307 FTH1P02794 183 aa13.65□□□□□ -0.22
SF3B2-215ENST00000534307 POLR2CP19387 275 aaPredicted RBP13.65□□□□□ -0.22
SF3B2-215ENST00000534307 ARCN1P48444 511 aaKnown RBP13.65□□□□□ -0.22
SF3B2-215ENST00000534307 ACY1Q03154 408 aa13.65□□□□□ -0.22
SF3B2-215ENST00000534307 CDC20Q12834 499 aa13.65□□□□□ -0.22
SF3B2-215ENST00000534307 KRT33BQ14525 404 aa13.65□□□□□ -0.22
SF3B2-215ENST00000534307 KCTD19Q17RG1 926 aaPredicted RBP13.65□□□□□ -0.22
SF3B2-215ENST00000534307 BPHLQ86WA6 291 aaPredicted RBP13.65□□□□□ -0.22
SF3B2-215ENST00000534307 PHC3Q8NDX5 983 aa13.65□□□□□ -0.22
SF3B2-215ENST00000534307 OR52E1Q8NGJ3 308 aa13.65□□□□□ -0.22
SF3B2-215ENST00000534307 MAIP1Q8WWC4 291 aa13.65□□□□□ -0.22
SF3B2-215ENST00000534307 STARD8Q92502 1023 aa13.65□□□□□ -0.22
SF3B2-215ENST00000534307 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.65□□□□□ -0.22
SF3B2-215ENST00000534307 FERD3LQ96RJ6 166 aa13.65□□□□□ -0.22
SF3B2-215ENST00000534307 SRMSQ9H3Y6 488 aa13.65□□□□□ -0.22
SF3B2-215ENST00000534307 GRPEL1Q9HAV7 217 aa13.65□□□□□ -0.22
SF3B2-215ENST00000534307 CHRAC1Q9NRG0 131 aa13.65□□□□□ -0.22
SF3B2-215ENST00000534307 C1GALT1Q9NS00 363 aa13.65□□□□□ -0.22
SF3B2-215ENST00000534307 FGF21Q9NSA1 209 aa13.65□□□□□ -0.22
SF3B2-215ENST00000534307 STARD5Q9NSY2 213 aa13.65□□□□□ -0.22
SF3B2-215ENST00000534307 ANKMY1Q9P2S6 941 aa13.65□□□□□ -0.22
SF3B2-215ENST00000534307 RARRES3Q9UL19 164 aa13.65□□□□□ -0.22
SF3B2-215ENST00000534307 ICE1Q9Y2F5 2266 aa13.65□□□□□ -0.22
SF3B2-215ENST00000534307 CENPEQ02224 2701 aa13.64□□□□□ -0.23
SF3B2-215ENST00000534307 MSL3P1P0C860 447 aa13.64□□□□□ -0.23
SF3B2-215ENST00000534307 TPBGLP0DKB5 382 aa13.64□□□□□ -0.23
SF3B2-215ENST00000534307 OAS2P29728 719 aaKnown RBP13.64□□□□□ -0.23
SF3B2-215ENST00000534307 PRDX3P30048 256 aaKnown RBP13.64□□□□□ -0.23
SF3B2-215ENST00000534307 TUBB4BP68371 445 aa13.64□□□□□ -0.23
SF3B2-215ENST00000534307 CRADDP78560 199 aa13.64□□□□□ -0.23
SF3B2-215ENST00000534307 TUBB2AQ13885 445 aa13.64□□□□□ -0.23
SF3B2-215ENST00000534307 GPR19Q15760 415 aa13.64□□□□□ -0.23
SF3B2-215ENST00000534307 PCID2Q5JVF3 399 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms