RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 ZFATQ9P243 1243 aa11.69□□□□□ -0.54
SSBP3-214ENST00000533209 SLC24A2Q9UI40 661 aa11.69□□□□□ -0.54
SSBP3-214ENST00000533209 ENTPD2Q9Y5L3 495 aa11.69□□□□□ -0.54
SSBP3-214ENST00000533209 PSAT1Q9Y617 370 aa11.69□□□□□ -0.54
SSBP3-214ENST00000533209 COMMD10Q9Y6G5 202 aa11.69□□□□□ -0.54
SSBP3-214ENST00000533209 TCRBV9S1A1TA0A576 114 aa11.68□□□□□ -0.54
SSBP3-214ENST00000533209 E5RI56 91 aa11.68□□□□□ -0.54
SSBP3-214ENST00000533209 DUX1O43812 170 aa11.68□□□□□ -0.54
SSBP3-214ENST00000533209 PIAS1O75925 651 aa11.68□□□□□ -0.54
SSBP3-214ENST00000533209 PROS1P07225 676 aa11.68□□□□□ -0.54
SSBP3-214ENST00000533209 HOXB3P14651 431 aaPredicted RBP11.68□□□□□ -0.54
SSBP3-214ENST00000533209 NDUFS1P28331 727 aa11.68□□□□□ -0.54
SSBP3-214ENST00000533209 DEKP35659 375 aaKnown RBP11.68□□□□□ -0.54
SSBP3-214ENST00000533209 ABCG1P45844 678 aa11.68□□□□□ -0.54
SSBP3-214ENST00000533209 MAPK9P45984 424 aa11.68□□□□□ -0.54
SSBP3-214ENST00000533209 MAP9Q49MG5 647 aa11.68□□□□□ -0.54
SSBP3-214ENST00000533209 RBM20Q5T481 1227 aaKnown RBP11.68□□□□□ -0.54
SSBP3-214ENST00000533209 C3orf62Q6ZUJ4 267 aa11.68□□□□□ -0.54
SSBP3-214ENST00000533209 SPNS2Q8IVW8 549 aa11.68□□□□□ -0.54
SSBP3-214ENST00000533209 ZBTB2Q8N680 514 aa11.68□□□□□ -0.54
SSBP3-214ENST00000533209 OR5AR1Q8NGP9 310 aa11.68□□□□□ -0.54
SSBP3-214ENST00000533209 GIMAP7Q8NHV1 300 aa11.68□□□□□ -0.54
SSBP3-214ENST00000533209 KCNJ9Q92806 393 aa11.68□□□□□ -0.54
SSBP3-214ENST00000533209 ATXN7L3BQ96GX2 97 aa11.68□□□□□ -0.54
SSBP3-214ENST00000533209 AHCYL2Q96HN2 611 aaKnown RBP11.68□□□□□ -0.54
SSBP3-214ENST00000533209 FERD3LQ96RJ6 166 aa11.68□□□□□ -0.54
SSBP3-214ENST00000533209 CCDC68Q9H2F9 335 aa11.68□□□□□ -0.54
SSBP3-214ENST00000533209 SEMA6CQ9H3T2 930 aa11.68□□□□□ -0.54
SSBP3-214ENST00000533209 EPB41L1Q9H4G0 881 aa11.68□□□□□ -0.54
SSBP3-214ENST00000533209 LRRC4CQ9HCJ2 640 aa11.68□□□□□ -0.54
SSBP3-214ENST00000533209 TMEM9Q9P0T7 183 aa11.68□□□□□ -0.54
SSBP3-214ENST00000533209 MTRF1LQ9UGC7 380 aaKnown RBP11.68□□□□□ -0.54
SSBP3-214ENST00000533209 ASF1AQ9Y294 204 aa11.68□□□□□ -0.54
SSBP3-214ENST00000533209 DHRS7Q9Y394 339 aa11.68□□□□□ -0.54
SSBP3-214ENST00000533209 COLEC10Q9Y6Z7 277 aa11.68□□□□□ -0.54
SSBP3-214ENST00000533209 PTPRBP23467 1997 aa11.68□□□□□ -0.54
SSBP3-214ENST00000533209 CHD8Q9HCK8 2581 aa11.67□□□□□ -0.54
SSBP3-214ENST00000533209 IGHV5-10-1A0A0J9YXX1 117 aa11.67□□□□□ -0.54
SSBP3-214ENST00000533209 A0A1W2PNU3 283 aaPredicted RBP11.67□□□□□ -0.54
SSBP3-214ENST00000533209 FAM159BA6NKW6 160 aa11.67□□□□□ -0.54
SSBP3-214ENST00000533209 CXorf49A8MYA2 514 aaPredicted RBP11.67□□□□□ -0.54
SSBP3-214ENST00000533209 TYRP1P17643 537 aa11.67□□□□□ -0.54
SSBP3-214ENST00000533209 ATP5DP30049 168 aa11.67□□□□□ -0.54
SSBP3-214ENST00000533209 CCKBRP32239 447 aa11.67□□□□□ -0.54
SSBP3-214ENST00000533209 CAPZBP47756 277 aa11.67□□□□□ -0.54
SSBP3-214ENST00000533209 LIMK2P53671 638 aa11.67□□□□□ -0.54
SSBP3-214ENST00000533209 INHBCP55103 352 aa11.67□□□□□ -0.54
SSBP3-214ENST00000533209 CDKN2DP55273 166 aa11.67□□□□□ -0.54
SSBP3-214ENST00000533209 ABRQ12979 859 aa11.67□□□□□ -0.54
SSBP3-214ENST00000533209 CUL1Q13616 776 aa11.67□□□□□ -0.54
SSBP3-214ENST00000533209 KRT33BQ14525 404 aa11.67□□□□□ -0.54
SSBP3-214ENST00000533209 ACSBG2Q5FVE4 666 aa11.67□□□□□ -0.54
SSBP3-214ENST00000533209 UBAP2Q5T6F2 1119 aaKnown RBP11.67□□□□□ -0.54
SSBP3-214ENST00000533209 TMEM71Q6P5X7 295 aa11.67□□□□□ -0.54
SSBP3-214ENST00000533209 WDR74Q6RFH5 385 aaPredicted RBP11.67□□□□□ -0.54
SSBP3-214ENST00000533209 SLC26A11Q86WA9 606 aa11.67□□□□□ -0.54
SSBP3-214ENST00000533209 RELL1Q8IUW5 271 aa11.67□□□□□ -0.54
SSBP3-214ENST00000533209 IFT20Q8IY31 132 aa11.67□□□□□ -0.54
SSBP3-214ENST00000533209 TBC1D21Q8IYX1 336 aa11.67□□□□□ -0.54
SSBP3-214ENST00000533209 SIDT2Q8NBJ9 832 aaKnown RBP11.67□□□□□ -0.54
SSBP3-214ENST00000533209 ACVR1CQ8NER5 493 aa11.67□□□□□ -0.54
SSBP3-214ENST00000533209 OR4D9Q8NGE8 314 aa11.67□□□□□ -0.54
SSBP3-214ENST00000533209 OR52E1Q8NGJ3 308 aa11.67□□□□□ -0.54
SSBP3-214ENST00000533209 CD200R1Q8TD46 325 aa11.67□□□□□ -0.54
SSBP3-214ENST00000533209 NCSTNQ92542 709 aa11.67□□□□□ -0.54
SSBP3-214ENST00000533209 RSC1A1Q92681 617 aa11.67□□□□□ -0.54
SSBP3-214ENST00000533209 GATA6Q92908 595 aa11.67□□□□□ -0.54
SSBP3-214ENST00000533209 GRAMD1AQ96CP6 724 aa11.67□□□□□ -0.54
SSBP3-214ENST00000533209 TMEM74Q96NL1 305 aa11.67□□□□□ -0.54
SSBP3-214ENST00000533209 FMO2Q99518 471 aa11.67□□□□□ -0.54
SSBP3-214ENST00000533209 NDNQ99608 321 aa11.67□□□□□ -0.54
SSBP3-214ENST00000533209 GPR21Q99679 349 aa11.67□□□□□ -0.54
SSBP3-214ENST00000533209 NRTNQ99748 197 aa11.67□□□□□ -0.54
SSBP3-214ENST00000533209 DPYSL5Q9BPU6 564 aa11.67□□□□□ -0.54
SSBP3-214ENST00000533209 MCMBPQ9BTE3 642 aa11.67□□□□□ -0.54
SSBP3-214ENST00000533209 HGH1Q9BTY7 390 aa11.67□□□□□ -0.54
SSBP3-214ENST00000533209 TMEM121BQ9BXQ6 578 aaPredicted RBP11.67□□□□□ -0.54
SSBP3-214ENST00000533209 NINJ2Q9NZG7 142 aa11.67□□□□□ -0.54
SSBP3-214ENST00000533209 PDP2Q9P2J9 529 aa11.67□□□□□ -0.54
SSBP3-214ENST00000533209 KLHL42Q9P2K6 505 aa11.67□□□□□ -0.54
SSBP3-214ENST00000533209 CORO1CQ9ULV4 474 aaPredicted RBP11.67□□□□□ -0.54
SSBP3-214ENST00000533209 NFU1Q9UMS0 254 aa11.67□□□□□ -0.54
SSBP3-214ENST00000533209 FRYQ5TBA9 3013 aa11.67□□□□□ -0.54
SSBP3-214ENST00000533209 MN1Q10571 1320 aaPredicted RBP11.66□□□□□ -0.54
SSBP3-214ENST00000533209 UNC13CQ8NB66 2214 aa11.66□□□□□ -0.54
SSBP3-214ENST00000533209 TRABD2BA6NFA1 517 aa11.66□□□□□ -0.54
SSBP3-214ENST00000533209 SPAG6O75602 509 aa11.66□□□□□ -0.54
SSBP3-214ENST00000533209 C9P02748 559 aa11.66□□□□□ -0.54
SSBP3-214ENST00000533209 TPBGLP0DKB5 382 aa11.66□□□□□ -0.54
SSBP3-214ENST00000533209 THRAP10827 490 aa11.66□□□□□ -0.54
SSBP3-214ENST00000533209 AMD1P17707 334 aa11.66□□□□□ -0.54
SSBP3-214ENST00000533209 CD9P21926 228 aa11.66□□□□□ -0.54
SSBP3-214ENST00000533209 MPSTP25325 297 aa11.66□□□□□ -0.54
SSBP3-214ENST00000533209 PPM1FP49593 454 aaPredicted RBP11.66□□□□□ -0.54
SSBP3-214ENST00000533209 GFERP55789 205 aa11.66□□□□□ -0.54
SSBP3-214ENST00000533209 PRKG2Q13237 762 aa11.66□□□□□ -0.54
SSBP3-214ENST00000533209 PLCL1Q15111 1095 aa11.66□□□□□ -0.54
SSBP3-214ENST00000533209 KYNUQ16719 465 aa11.66□□□□□ -0.54
SSBP3-214ENST00000533209 TEX35Q5T0J7 233 aa11.66□□□□□ -0.54
SSBP3-214ENST00000533209 UNC5DQ6UXZ4 953 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms