RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 KMT5CQ86Y97 462 aa8.96□□□□□ -0.98
CHMP4A-205ENST00000531158 HOMEZQ8IX15 550 aa8.96□□□□□ -0.98
CHMP4A-205ENST00000531158 DSELQ8IZU8 1212 aa8.96□□□□□ -0.98
CHMP4A-205ENST00000531158 BEND7Q8N7W2 519 aaPredicted RBP8.96□□□□□ -0.98
CHMP4A-205ENST00000531158 KCTD6Q8NC69 237 aa8.96□□□□□ -0.98
CHMP4A-205ENST00000531158 SPATA4Q8NEY3 305 aa8.96□□□□□ -0.98
CHMP4A-205ENST00000531158 PRR7Q8TB68 274 aa8.96□□□□□ -0.98
CHMP4A-205ENST00000531158 AENQ8WTP8 325 aaKnown RBP8.96□□□□□ -0.98
CHMP4A-205ENST00000531158 COG1Q8WTW3 980 aa8.96□□□□□ -0.98
CHMP4A-205ENST00000531158 SEC14L1Q92503 715 aa8.96□□□□□ -0.98
CHMP4A-205ENST00000531158 MR1Q95460 341 aa8.96□□□□□ -0.98
CHMP4A-205ENST00000531158 PNPLA2Q96AD5 504 aa8.96□□□□□ -0.98
CHMP4A-205ENST00000531158 SNRNP40Q96DI7 357 aaKnown RBP8.96□□□□□ -0.98
CHMP4A-205ENST00000531158 CAPZA3Q96KX2 299 aa8.96□□□□□ -0.98
CHMP4A-205ENST00000531158 LRFN5Q96NI6 719 aa8.96□□□□□ -0.98
CHMP4A-205ENST00000531158 AGAP3Q96P47 875 aa8.96□□□□□ -0.98
CHMP4A-205ENST00000531158 INSM2Q96T92 566 aaPredicted RBP8.96□□□□□ -0.98
CHMP4A-205ENST00000531158 TLR10Q9BXR5 811 aa8.96□□□□□ -0.98
CHMP4A-205ENST00000531158 PACSIN1Q9BY11 444 aa8.96□□□□□ -0.98
CHMP4A-205ENST00000531158 GPR63Q9BZJ6 419 aa8.96□□□□□ -0.98
CHMP4A-205ENST00000531158 UGT1A7Q9HAW7 530 aa8.96□□□□□ -0.98
CHMP4A-205ENST00000531158 UGT1A10Q9HAW8 530 aa8.96□□□□□ -0.98
CHMP4A-205ENST00000531158 UGT1A8Q9HAW9 530 aa8.96□□□□□ -0.98
CHMP4A-205ENST00000531158 IMP3Q9NV31 184 aaKnown RBP8.96□□□□□ -0.98
CHMP4A-205ENST00000531158 PCMTD2Q9NV79 361 aa8.96□□□□□ -0.98
CHMP4A-205ENST00000531158 ASF1BQ9NVP2 202 aa8.96□□□□□ -0.98
CHMP4A-205ENST00000531158 UBP1Q9NZI7 540 aa8.96□□□□□ -0.98
CHMP4A-205ENST00000531158 TCFL5Q9UL49 500 aa8.96□□□□□ -0.98
CHMP4A-205ENST00000531158 NTNG1Q9Y2I2 539 aa8.96□□□□□ -0.98
CHMP4A-205ENST00000531158 A6NL46 340 aa8.95□□□□□ -0.98
CHMP4A-205ENST00000531158 MYO1FO00160 1098 aa8.95□□□□□ -0.98
CHMP4A-205ENST00000531158 MASP2O00187 686 aa8.95□□□□□ -0.98
CHMP4A-205ENST00000531158 MEN1O00255 615 aa8.95□□□□□ -0.98
CHMP4A-205ENST00000531158 ZNF185O15231 689 aa8.95□□□□□ -0.98
CHMP4A-205ENST00000531158 BUD23O43709 281 aaKnown RBP8.95□□□□□ -0.98
CHMP4A-205ENST00000531158 SGTAO43765 313 aa8.95□□□□□ -0.98
CHMP4A-205ENST00000531158 NDST3O95803 873 aa8.95□□□□□ -0.98
CHMP4A-205ENST00000531158 PRF1P14222 555 aa8.95□□□□□ -0.98
CHMP4A-205ENST00000531158 MX2P20592 715 aa8.95□□□□□ -0.98
CHMP4A-205ENST00000531158 CD68P34810 354 aaPredicted RBP8.95□□□□□ -0.98
CHMP4A-205ENST00000531158 HMGCLP35914 325 aa8.95□□□□□ -0.98
CHMP4A-205ENST00000531158 CHRNA4P43681 627 aa8.95□□□□□ -0.98
CHMP4A-205ENST00000531158 FOXL2P58012 376 aa8.95□□□□□ -0.98
CHMP4A-205ENST00000531158 C2orf54Q08AI8 447 aa8.95□□□□□ -0.98
CHMP4A-205ENST00000531158 PTPRCAPQ14761 206 aa8.95□□□□□ -0.98
CHMP4A-205ENST00000531158 NR6A1Q15406 480 aa8.95□□□□□ -0.98
CHMP4A-205ENST00000531158 SLC14A2Q15849 920 aa8.95□□□□□ -0.98
CHMP4A-205ENST00000531158 HADHQ16836 314 aaKnown RBP8.95□□□□□ -0.98
CHMP4A-205ENST00000531158 PTCHD3Q3KNS1 767 aa8.95□□□□□ -0.98
CHMP4A-205ENST00000531158 PLEKHN1Q494U1 663 aaPredicted RBP8.95□□□□□ -0.98
CHMP4A-205ENST00000531158 CRB2Q5IJ48 1285 aa8.95□□□□□ -0.98
CHMP4A-205ENST00000531158 MEI1Q5TIA1 1274 aa8.95□□□□□ -0.98
CHMP4A-205ENST00000531158 METRNLQ641Q3 311 aa8.95□□□□□ -0.98
CHMP4A-205ENST00000531158 ZNF385CQ66K41 422 aaPredicted RBP8.95□□□□□ -0.98
CHMP4A-205ENST00000531158 KDELC1Q6UW63 502 aa8.95□□□□□ -0.98
CHMP4A-205ENST00000531158 MICALCLQ6ZW33 695 aa8.95□□□□□ -0.98
CHMP4A-205ENST00000531158 NT5DC3Q86UY8 548 aa8.95□□□□□ -0.98
CHMP4A-205ENST00000531158 AMZ2Q86W34 360 aa8.95□□□□□ -0.98
CHMP4A-205ENST00000531158 BPHLQ86WA6 291 aaPredicted RBP8.95□□□□□ -0.98
CHMP4A-205ENST00000531158 TMEM126BQ8IUX1 230 aa8.95□□□□□ -0.98
CHMP4A-205ENST00000531158 RHOT1Q8IXI2 618 aa8.95□□□□□ -0.98
CHMP4A-205ENST00000531158 LILRA3Q8N6C8 439 aaPredicted RBP8.95□□□□□ -0.98
CHMP4A-205ENST00000531158 EIF1ADQ8N9N8 165 aaKnown RBP8.95□□□□□ -0.98
CHMP4A-205ENST00000531158 GLIS1Q8NBF1 620 aa8.95□□□□□ -0.98
CHMP4A-205ENST00000531158 DDHD1Q8NEL9 900 aa8.95□□□□□ -0.98
CHMP4A-205ENST00000531158 OR1L3Q8NH93 324 aa8.95□□□□□ -0.98
CHMP4A-205ENST00000531158 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.95□□□□□ -0.982e-6■■■■■ 29
CHMP4A-205ENST00000531158 CALR3Q96L12 384 aaKnown RBP8.95□□□□□ -0.98
CHMP4A-205ENST00000531158 RMDN2Q96LZ7 410 aa8.95□□□□□ -0.98
CHMP4A-205ENST00000531158 CD180Q99467 661 aa8.95□□□□□ -0.98
CHMP4A-205ENST00000531158 SMAD5Q99717 465 aaKnown RBP8.95□□□□□ -0.98
CHMP4A-205ENST00000531158 WWP1Q9H0M0 922 aa8.95□□□□□ -0.98
CHMP4A-205ENST00000531158 SLC25A51Q9H1U9 297 aa8.95□□□□□ -0.98
CHMP4A-205ENST00000531158 LATS2Q9NRM7 1088 aa8.95□□□□□ -0.98
CHMP4A-205ENST00000531158 HRASLS2Q9NWW9 162 aa8.95□□□□□ -0.98
CHMP4A-205ENST00000531158 SLC24A2Q9UI40 661 aa8.95□□□□□ -0.98
CHMP4A-205ENST00000531158 BTRCQ9Y297 605 aa8.95□□□□□ -0.98
CHMP4A-205ENST00000531158 HEY1Q9Y5J3 304 aa8.95□□□□□ -0.98
CHMP4A-205ENST00000531158 PCNX1Q96RV3 2341 aa8.95□□□□□ -0.98
CHMP4A-205ENST00000531158 HIVEP1P15822 2718 aa8.95□□□□□ -0.98
CHMP4A-205ENST00000531158 PKDREJQ9NTG1 2253 aa8.94□□□□□ -0.98
CHMP4A-205ENST00000531158 CPAMD8Q8IZJ3 1885 aa8.94□□□□□ -0.98
CHMP4A-205ENST00000531158 LOC285095A0A1B0GVY8 99 aa8.94□□□□□ -0.98
CHMP4A-205ENST00000531158 UBA6A0AVT1 1052 aaPredicted RBP8.94□□□□□ -0.98
CHMP4A-205ENST00000531158 OR6C74A6NCV1 312 aa8.94□□□□□ -0.98
CHMP4A-205ENST00000531158 SLC9B1P1A6NJY1 282 aa8.94□□□□□ -0.98
CHMP4A-205ENST00000531158 H3BMH7 237 aa8.94□□□□□ -0.98
CHMP4A-205ENST00000531158 POLR3GO15318 223 aaPredicted RBP8.94□□□□□ -0.98
CHMP4A-205ENST00000531158 HCRTR1O43613 425 aa8.94□□□□□ -0.98
CHMP4A-205ENST00000531158 PMPCBO75439 489 aa8.94□□□□□ -0.98
CHMP4A-205ENST00000531158 KLF7O75840 302 aaPredicted RBP8.94□□□□□ -0.98
CHMP4A-205ENST00000531158 ZBTB11O95625 1053 aaPredicted RBP8.94□□□□□ -0.98
CHMP4A-205ENST00000531158 PTPN3P26045 913 aa8.94□□□□□ -0.98
CHMP4A-205ENST00000531158 HALP42357 657 aa8.94□□□□□ -0.98
CHMP4A-205ENST00000531158 TNNT3P45378 269 aaPredicted RBP8.94□□□□□ -0.98
CHMP4A-205ENST00000531158 AP1B1Q10567 949 aa8.94□□□□□ -0.98
CHMP4A-205ENST00000531158 WASHC5Q12768 1159 aa8.94□□□□□ -0.98
CHMP4A-205ENST00000531158 PLCL1Q15111 1095 aa8.94□□□□□ -0.98
CHMP4A-205ENST00000531158 SIRPB2Q5JXA9 342 aa8.94□□□□□ -0.98
CHMP4A-205ENST00000531158 GPRC6AQ5T6X5 926 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms