RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 AP2A2O94973 939 aa20.31■□□□□ 0.84
SMPD1-204ENST00000530395 METTL18O95568 372 aa20.31■□□□□ 0.84
SMPD1-204ENST00000530395 KLK3P07288 261 aaPredicted RBP20.31■□□□□ 0.84
SMPD1-204ENST00000530395 TPH1P17752 444 aa20.31■□□□□ 0.84
SMPD1-204ENST00000530395 CDKN1CP49918 316 aaPredicted RBP20.31■□□□□ 0.84
SMPD1-204ENST00000530395 GSDMDP57764 484 aa20.31■□□□□ 0.84
SMPD1-204ENST00000530395 UGT8Q16880 541 aa20.31■□□□□ 0.84
SMPD1-204ENST00000530395 TCTN3Q6NUS6 607 aa20.31■□□□□ 0.84
SMPD1-204ENST00000530395 FAM199XQ6PEV8 388 aaPredicted RBP20.31■□□□□ 0.84
SMPD1-204ENST00000530395 FBXO38Q6PIJ6 1188 aa20.31■□□□□ 0.84
SMPD1-204ENST00000530395 TMEM135Q86UB9 458 aa20.31■□□□□ 0.84
SMPD1-204ENST00000530395 THAP4Q8WY91 577 aa20.31■□□□□ 0.84
SMPD1-204ENST00000530395 CPT1BQ92523 772 aa20.31■□□□□ 0.84
SMPD1-204ENST00000530395 TLR10Q9BXR5 811 aa20.31■□□□□ 0.84
SMPD1-204ENST00000530395 RBSNQ9H1K0 784 aa20.31■□□□□ 0.84
SMPD1-204ENST00000530395 TFB2MQ9H5Q4 396 aaKnown RBP20.31■□□□□ 0.84
SMPD1-204ENST00000530395 PACSIN2Q9UNF0 486 aaPredicted RBP20.31■□□□□ 0.84
SMPD1-204ENST00000530395 LRRK2Q5S007 2527 aa20.3■□□□□ 0.84
SMPD1-204ENST00000530395 QSOX1O00391 747 aa20.3■□□□□ 0.84
SMPD1-204ENST00000530395 AP2A1O95782 977 aa20.3■□□□□ 0.84
SMPD1-204ENST00000530395 FTCDO95954 541 aa20.3■□□□□ 0.84
SMPD1-204ENST00000530395 FOXK1P85037 733 aa20.3■□□□□ 0.84
SMPD1-204ENST00000530395 KLF1Q13351 362 aaPredicted RBP20.3■□□□□ 0.84
SMPD1-204ENST00000530395 LINC00523Q86TU6 105 aa20.3■□□□□ 0.84
SMPD1-204ENST00000530395 APLFQ8IW19 511 aaPredicted RBP20.3■□□□□ 0.84
SMPD1-204ENST00000530395 CLDN19Q8N6F1 224 aa20.3■□□□□ 0.84
SMPD1-204ENST00000530395 TEX19Q8NA77 164 aa20.3■□□□□ 0.84
SMPD1-204ENST00000530395 OR52E1Q8NGJ3 308 aa20.3■□□□□ 0.84
SMPD1-204ENST00000530395 CDKN2AIPNLQ96HQ2 116 aa20.3■□□□□ 0.84
SMPD1-204ENST00000530395 PPM1MQ96MI6 270 aa20.3■□□□□ 0.84
SMPD1-204ENST00000530395 LRFN5Q96NI6 719 aa20.3■□□□□ 0.84
SMPD1-204ENST00000530395 AKIRIN1Q9H9L7 192 aaPredicted RBP20.3■□□□□ 0.84
SMPD1-204ENST00000530395 TLK1Q9UKI8 766 aa20.3■□□□□ 0.84
SMPD1-204ENST00000530395 RELNP78509 3460 aa20.3■□□□□ 0.84
SMPD1-204ENST00000530395 SPTBP11277 2137 aa20.29■□□□□ 0.84
SMPD1-204ENST00000530395 GAS8O95995 478 aa20.29■□□□□ 0.84
SMPD1-204ENST00000530395 PRDX3P30048 256 aaKnown RBP20.29■□□□□ 0.84
SMPD1-204ENST00000530395 NSG1P42857 185 aa20.29■□□□□ 0.84
SMPD1-204ENST00000530395 PREPP48147 710 aa20.29■□□□□ 0.84
SMPD1-204ENST00000530395 RPS18P62269 152 aaKnown RBP20.29■□□□□ 0.84
SMPD1-204ENST00000530395 GPS2Q13227 327 aa20.29■□□□□ 0.84
SMPD1-204ENST00000530395 SEMA5AQ13591 1074 aa20.29■□□□□ 0.84
SMPD1-204ENST00000530395 DBN1Q16643 649 aa20.29■□□□□ 0.84
SMPD1-204ENST00000530395 ASB18Q6ZVZ8 466 aa20.29■□□□□ 0.84
SMPD1-204ENST00000530395 AMIGO1Q86WK6 493 aa20.29■□□□□ 0.84
SMPD1-204ENST00000530395 SLC35B2Q8TB61 432 aa20.29■□□□□ 0.84
SMPD1-204ENST00000530395 CLIP3Q96DZ5 547 aa20.29■□□□□ 0.84
SMPD1-204ENST00000530395 RUFY1Q96T51 708 aa20.29■□□□□ 0.84
SMPD1-204ENST00000530395 TMEM121Q9BTD3 319 aa20.29■□□□□ 0.84
SMPD1-204ENST00000530395 HGH1Q9BTY7 390 aa20.29■□□□□ 0.84
SMPD1-204ENST00000530395 SMARCAL1Q9NZC9 954 aa20.29■□□□□ 0.84
SMPD1-204ENST00000530395 FARSAQ9Y285 508 aaKnown RBP20.29■□□□□ 0.84
SMPD1-204ENST00000530395 R3HDM2Q9Y2K5 976 aaKnown RBP20.29■□□□□ 0.84
SMPD1-204ENST00000530395 C2orf74A8MZ97 194 aa20.28■□□□□ 0.84
SMPD1-204ENST00000530395 TMEM150CB9EJG8 249 aa20.28■□□□□ 0.84
SMPD1-204ENST00000530395 BTN3A1O00481 513 aa20.28■□□□□ 0.84
SMPD1-204ENST00000530395 LIN7AO14910 233 aaPredicted RBP20.28■□□□□ 0.84
SMPD1-204ENST00000530395 DDX3YO15523 660 aaKnown RBP20.28■□□□□ 0.84
SMPD1-204ENST00000530395 FTH1P02794 183 aa20.28■□□□□ 0.84
SMPD1-204ENST00000530395 MSL3P1P0C860 447 aa20.28■□□□□ 0.84
SMPD1-204ENST00000530395 PRSS56P0CW18 603 aa20.28■□□□□ 0.84
SMPD1-204ENST00000530395 NR1D1P20393 614 aa20.28■□□□□ 0.84
SMPD1-204ENST00000530395 CYP2A7P20853 494 aa20.28■□□□□ 0.84
SMPD1-204ENST00000530395 MSNP26038 577 aaKnown RBP20.28■□□□□ 0.84
SMPD1-204ENST00000530395 PDHA2P29803 388 aa20.28■□□□□ 0.84
SMPD1-204ENST00000530395 GDF10P55107 478 aa20.28■□□□□ 0.84
SMPD1-204ENST00000530395 BOP1Q14137 746 aaKnown RBP20.28■□□□□ 0.84
SMPD1-204ENST00000530395 ITIH4Q14624 930 aa20.28■□□□□ 0.84
SMPD1-204ENST00000530395 ZNF658BQ4V348 819 aaPredicted RBP20.28■□□□□ 0.84
SMPD1-204ENST00000530395 IZUMO3Q5VZ72 239 aa20.28■□□□□ 0.84
SMPD1-204ENST00000530395 ZNF517Q6ZMY9 492 aaPredicted RBP20.28■□□□□ 0.84
SMPD1-204ENST00000530395 HOOK3Q86VS8 718 aa20.28■□□□□ 0.84
SMPD1-204ENST00000530395 PIANPQ8IYJ0 282 aa20.28■□□□□ 0.84
SMPD1-204ENST00000530395 TFGQ92734 400 aaPredicted RBP20.28■□□□□ 0.84
SMPD1-204ENST00000530395 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.28■□□□□ 0.84
SMPD1-204ENST00000530395 PITPNM3Q9BZ71 974 aa20.28■□□□□ 0.84
SMPD1-204ENST00000530395 CHST8Q9H2A9 424 aa20.28■□□□□ 0.84
SMPD1-204ENST00000530395 PIH1D1Q9NWS0 290 aaKnown RBP20.28■□□□□ 0.84
SMPD1-204ENST00000530395 ERI2A8K979 691 aaKnown RBP20.27■□□□□ 0.84
SMPD1-204ENST00000530395 MEN1O00255 615 aa20.27■□□□□ 0.84
SMPD1-204ENST00000530395 BTN3A3O00478 584 aa20.27■□□□□ 0.84
SMPD1-204ENST00000530395 DSELQ8IZU8 1212 aa20.27■□□□□ 0.84
SMPD1-204ENST00000530395 TAB3Q8N5C8 712 aaPredicted RBP20.27■□□□□ 0.84
SMPD1-204ENST00000530395 DNAAF3Q8N9W5 541 aa20.27■□□□□ 0.84
SMPD1-204ENST00000530395 SLC38A9Q8NBW4 561 aa20.27■□□□□ 0.84
SMPD1-204ENST00000530395 PHC3Q8NDX5 983 aa20.27■□□□□ 0.84
SMPD1-204ENST00000530395 DESI2Q9BSY9 194 aa20.27■□□□□ 0.84
SMPD1-204ENST00000530395 SLC7A5P2Q9GIP4 190 aa20.27■□□□□ 0.84
SMPD1-204ENST00000530395 ACTR5Q9H9F9 607 aaPredicted RBP20.27■□□□□ 0.84
SMPD1-204ENST00000530395 SERTAD3Q9UJW9 196 aa20.27■□□□□ 0.84
SMPD1-204ENST00000530395 SNX7Q9UNH6 387 aa20.27■□□□□ 0.84
SMPD1-204ENST00000530395 CCDC78A2IDD5 438 aa20.26■□□□□ 0.83
SMPD1-204ENST00000530395 MROH6A6NGR9 719 aa20.26■□□□□ 0.83
SMPD1-204ENST00000530395 F8W8V4 182 aa20.26■□□□□ 0.83
SMPD1-204ENST00000530395 RAB40ALP0C0E4 278 aa20.26■□□□□ 0.83
SMPD1-204ENST00000530395 ST6GAL1P15907 406 aa20.26■□□□□ 0.83
SMPD1-204ENST00000530395 LMAN1P49257 510 aa20.26■□□□□ 0.83
SMPD1-204ENST00000530395 CDH17Q12864 832 aa20.26■□□□□ 0.83
SMPD1-204ENST00000530395 ABRQ12979 859 aa20.26■□□□□ 0.83
SMPD1-204ENST00000530395 PRKG2Q13237 762 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms