RNA–Protein interactions for RNA: ENST00000527718.1

PABPC4-222, Transcript of poly(A) binding protein cytoplasmic 4, human

TSL 5

Gene PABPC4, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC4-222	ENST00000527718	SLC40A1	Q9NP59	571 aa		6.15	□□□□□ -1.42
PABPC4-222	ENST00000527718	PNPO	Q9NVS9	261 aa		6.15	□□□□□ -1.42
PABPC4-222	ENST00000527718	ZNF358	Q9NW07	568 aa		6.15	□□□□□ -1.42
PABPC4-222	ENST00000527718	GPRC5B	Q9NZH0	403 aa		6.15	□□□□□ -1.42
PABPC4-222	ENST00000527718	STOML1	Q9UBI4	398 aa		6.15	□□□□□ -1.42
PABPC4-222	ENST00000527718	TRPS1	Q9UHF7	1281 aa		6.15	□□□□□ -1.42
PABPC4-222	ENST00000527718	ADGRE2	Q9UHX3	823 aa		6.15	□□□□□ -1.42
PABPC4-222	ENST00000527718	ACSL5	Q9ULC5	683 aa		6.15	□□□□□ -1.42
PABPC4-222	ENST00000527718	FZD4	Q9ULV1	537 aa		6.15	□□□□□ -1.42
PABPC4-222	ENST00000527718	CLEC4E	Q9ULY5	219 aa		6.15	□□□□□ -1.42
PABPC4-222	ENST00000527718	HEBP2	Q9Y5Z4	205 aa		6.15	□□□□□ -1.42
PABPC4-222	ENST00000527718	ACTL7A	Q9Y615	435 aa		6.15	□□□□□ -1.42
PABPC4-222	ENST00000527718	STON1	Q9Y6Q2	735 aa		6.15	□□□□□ -1.42
PABPC4-222	ENST00000527718	PLXNA4	Q9HCM2	1894 aa		6.15	□□□□□ -1.43
PABPC4-222	ENST00000527718	NYNRIN	Q9P2P1	1898 aa	Known RBP	6.15	□□□□□ -1.43
PABPC4-222	ENST00000527718	NUP205	Q92621	2012 aa		6.15	□□□□□ -1.43
PABPC4-222	ENST00000527718	KIAA1671	Q9BY89	1806 aa		6.14	□□□□□ -1.43
PABPC4-222	ENST00000527718	KANSL1L	A0AUZ9	987 aa		6.14	□□□□□ -1.43
PABPC4-222	ENST00000527718	LRRC72	A6NJI9	287 aa		6.14	□□□□□ -1.43
PABPC4-222	ENST00000527718	CAPN14	A8MX76	684 aa		6.14	□□□□□ -1.43
PABPC4-222	ENST00000527718		E9PBE3	544 aa		6.14	□□□□□ -1.43
PABPC4-222	ENST00000527718	KMO	O15229	486 aa		6.14	□□□□□ -1.43
PABPC4-222	ENST00000527718	DCX	O43602	365 aa		6.14	□□□□□ -1.43
PABPC4-222	ENST00000527718	ITM2A	O43736	263 aa		6.14	□□□□□ -1.43
PABPC4-222	ENST00000527718	MGRN1	O60291	552 aa		6.14	□□□□□ -1.43
PABPC4-222	ENST00000527718	OR1I1	O60431	355 aa		6.14	□□□□□ -1.43
PABPC4-222	ENST00000527718	CCNT2	O60583	730 aa	Known RBP	6.14	□□□□□ -1.43
PABPC4-222	ENST00000527718	KLHL41	O60662	606 aa		6.14	□□□□□ -1.43
PABPC4-222	ENST00000527718	LYPLA1	O75608	230 aa	Predicted RBP	6.14	□□□□□ -1.43
PABPC4-222	ENST00000527718	GJB3	O75712	270 aa		6.14	□□□□□ -1.43
PABPC4-222	ENST00000527718	SLCO2B1	O94956	709 aa		6.14	□□□□□ -1.43
PABPC4-222	ENST00000527718	PCDH8	O95206	1070 aa		6.14	□□□□□ -1.43
PABPC4-222	ENST00000527718	CLDN9	O95484	217 aa		6.14	□□□□□ -1.43
PABPC4-222	ENST00000527718	SNRPB2	P08579	225 aa	Known RBP	6.14	□□□□□ -1.43
PABPC4-222	ENST00000527718	C1S	P09871	688 aa		6.14	□□□□□ -1.43
PABPC4-222	ENST00000527718	COX4I1	P13073	169 aa		6.14	□□□□□ -1.43
PABPC4-222	ENST00000527718	SLC2A4	P14672	509 aa		6.14	□□□□□ -1.43
PABPC4-222	ENST00000527718	ACPP	P15309	386 aa		6.14	□□□□□ -1.43
PABPC4-222	ENST00000527718	MPST	P25325	297 aa		6.14	□□□□□ -1.43
PABPC4-222	ENST00000527718	AOAH	P28039	575 aa		6.14	□□□□□ -1.43
PABPC4-222	ENST00000527718	HTR1B	P28222	390 aa		6.14	□□□□□ -1.43
PABPC4-222	ENST00000527718	NDUFS1	P28331	727 aa		6.14	□□□□□ -1.43
PABPC4-222	ENST00000527718	OXTR	P30559	389 aa		6.14	□□□□□ -1.43
PABPC4-222	ENST00000527718	GGT5	P36269	586 aa		6.14	□□□□□ -1.43
PABPC4-222	ENST00000527718	RPL3	P39023	403 aa	Known RBP	6.14	□□□□□ -1.43
PABPC4-222	ENST00000527718	HNF4A	P41235	474 aa		6.14	□□□□□ -1.43
PABPC4-222	ENST00000527718	PSMD8	P48556	350 aa		6.14	□□□□□ -1.43
PABPC4-222	ENST00000527718	MRPL19	P49406	292 aa	Known RBP	6.14	□□□□□ -1.43
PABPC4-222	ENST00000527718	RAP1GDS1	P52306	607 aa		6.14	□□□□□ -1.43
PABPC4-222	ENST00000527718	CLNS1A	P54105	237 aa	Known RBP	6.14	□□□□□ -1.43
PABPC4-222	ENST00000527718	ERVK-8	P63133	956 aa		6.14	□□□□□ -1.43
PABPC4-222	ENST00000527718	HSPA14	Q0VDF9	509 aa		6.14	□□□□□ -1.43
PABPC4-222	ENST00000527718	TMEM115	Q12893	351 aa	Predicted RBP	6.14	□□□□□ -1.43
PABPC4-222	ENST00000527718	DLG1	Q12959	904 aa		6.14	□□□□□ -1.43
PABPC4-222	ENST00000527718	KLF10	Q13118	480 aa		6.14	□□□□□ -1.43
PABPC4-222	ENST00000527718	SMAD4	Q13485	552 aa	Known RBP	6.14	□□□□□ -1.43
PABPC4-222	ENST00000527718	CAMK2G	Q13555	558 aa	Predicted RBP	6.14	□□□□□ -1.43
PABPC4-222	ENST00000527718	BOP1	Q14137	746 aa	Known RBP	6.14	□□□□□ -1.43
PABPC4-222	ENST00000527718	ARHGAP19	Q14CB8	494 aa		6.14	□□□□□ -1.43
PABPC4-222	ENST00000527718	CST6	Q15828	149 aa		6.14	□□□□□ -1.43
PABPC4-222	ENST00000527718	DPY19L1	Q2PZI1	675 aa		6.14	□□□□□ -1.43
PABPC4-222	ENST00000527718	LSM12	Q3MHD2	195 aa	Known RBP	6.14	□□□□□ -1.43
PABPC4-222	ENST00000527718	GGTA1P	Q4G0N0	100 aa		6.14	□□□□□ -1.43
PABPC4-222	ENST00000527718	ZNF789	Q5FWF6	425 aa		6.14	□□□□□ -1.43
PABPC4-222	ENST00000527718	C1orf146	Q5VVC0	180 aa		6.14	□□□□□ -1.43
PABPC4-222	ENST00000527718	LIPJ	Q5W064	366 aa		6.14	□□□□□ -1.43
PABPC4-222	ENST00000527718	KANK2	Q63ZY3	851 aa		6.14	□□□□□ -1.43
PABPC4-222	ENST00000527718	TRIM68	Q6AZZ1	485 aa		6.14	□□□□□ -1.43
PABPC4-222	ENST00000527718	CAPN13	Q6MZZ7	669 aa	Predicted RBP	6.14	□□□□□ -1.43
PABPC4-222	ENST00000527718	OGFOD2	Q6N063	350 aa		6.14	□□□□□ -1.43
PABPC4-222	ENST00000527718	ZFP1	Q6P2D0	407 aa		6.14	□□□□□ -1.43
PABPC4-222	ENST00000527718	SYCE2	Q6PIF2	218 aa		6.14	□□□□□ -1.43
PABPC4-222	ENST00000527718	HACD2	Q6Y1H2	254 aa		6.14	□□□□□ -1.43
PABPC4-222	ENST00000527718	PARS2	Q7L3T8	475 aa	Known RBP	6.14	□□□□□ -1.43
PABPC4-222	ENST00000527718	TECPR1	Q7Z6L1	1165 aa		6.14	□□□□□ -1.43
PABPC4-222	ENST00000527718	ALYREF	Q86V81	257 aa	Known RBP	6.14	□□□□□ -1.43
PABPC4-222	ENST00000527718	PIM3	Q86V86	326 aa		6.14	□□□□□ -1.43
PABPC4-222	ENST00000527718	LRRTM4	Q86VH4	590 aa		6.14	□□□□□ -1.43
PABPC4-222	ENST00000527718	TRAPPC5	Q8IUR0	188 aa		6.14	□□□□□ -1.43
PABPC4-222	ENST00000527718	SCUBE1	Q8IWY4	988 aa		6.14	□□□□□ -1.43
PABPC4-222	ENST00000527718	CCDC116	Q8IYX3	515 aa		6.14	□□□□□ -1.43
PABPC4-222	ENST00000527718	DEFB123	Q8N688	67 aa		6.14	□□□□□ -1.43
PABPC4-222	ENST00000527718	AVL9	Q8NBF6	648 aa		6.14	□□□□□ -1.43
PABPC4-222	ENST00000527718	CHST14	Q8NCH0	376 aa		6.14	□□□□□ -1.43
PABPC4-222	ENST00000527718	DENND6B	Q8NEG7	585 aa		6.14	□□□□□ -1.43
PABPC4-222	ENST00000527718	TRPC4AP	Q8TEL6	797 aa		6.14	□□□□□ -1.43
PABPC4-222	ENST00000527718	AGAP11	Q8TF27	550 aa		6.14	□□□□□ -1.43
PABPC4-222	ENST00000527718	TWIST2	Q8WVJ9	160 aa		6.14	□□□□□ -1.43
PABPC4-222	ENST00000527718	ANKRD49	Q8WVL7	239 aa		6.14	□□□□□ -1.43
PABPC4-222	ENST00000527718	DLG3	Q92796	817 aa		6.14	□□□□□ -1.43
PABPC4-222	ENST00000527718	PTCD3	Q96EY7	689 aa	Known RBP	6.14	□□□□□ -1.43
PABPC4-222	ENST00000527718	POM121	Q96HA1	1249 aa		6.14	□□□□□ -1.43
PABPC4-222	ENST00000527718	LINC00615	Q96LM1	132 aa	Predicted RBP	6.14	□□□□□ -1.43
PABPC4-222	ENST00000527718	COQ10A	Q96MF6	247 aa		6.14	□□□□□ -1.43
PABPC4-222	ENST00000527718	PRPF18	Q99633	342 aa	Known RBP	6.14	□□□□□ -1.43
PABPC4-222	ENST00000527718	TACO1	Q9BSH4	297 aa	Known RBP	6.14	□□□□□ -1.43
PABPC4-222	ENST00000527718	HAUS8	Q9BT25	410 aa		6.14	□□□□□ -1.43
PABPC4-222	ENST00000527718	NTMT1	Q9BV86	223 aa		6.14	□□□□□ -1.43
PABPC4-222	ENST00000527718	RIOK2	Q9BVS4	552 aa	Known RBP	6.14	□□□□□ -1.43
PABPC4-222	ENST00000527718	CCDC106	Q9BWC9	280 aa		6.14	□□□□□ -1.43

Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms