RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 HIST3H2AQ7L7L0 130 aa2.13□□□□□ -2.07
ECHDC1-219ENST00000526299 LRRTM4Q86VH4 590 aa2.13□□□□□ -2.07
ECHDC1-219ENST00000526299 SLC47A2Q86VL8 602 aa2.13□□□□□ -2.07
ECHDC1-219ENST00000526299 ZNF354CQ86Y25 554 aa2.13□□□□□ -2.07
ECHDC1-219ENST00000526299 ABHD12Q8N2K0 398 aa2.13□□□□□ -2.07
ECHDC1-219ENST00000526299 NKAPQ8N5F7 415 aaKnown RBP2.13□□□□□ -2.07
ECHDC1-219ENST00000526299 NUP37Q8NFH4 326 aa2.13□□□□□ -2.07
ECHDC1-219ENST00000526299 SMAP2Q8WU79 429 aaPredicted RBP2.13□□□□□ -2.07
ECHDC1-219ENST00000526299 TOMM40LQ969M1 308 aa2.13□□□□□ -2.07
ECHDC1-219ENST00000526299 ZNF582Q96NG8 517 aaPredicted RBP2.13□□□□□ -2.07
ECHDC1-219ENST00000526299 AGAP4Q96P64 663 aa2.13□□□□□ -2.07
ECHDC1-219ENST00000526299 KAT14Q9H8E8 782 aa2.13□□□□□ -2.07
ECHDC1-219ENST00000526299 NAALADL1Q9UQQ1 740 aa2.13□□□□□ -2.07
ECHDC1-219ENST00000526299 SPIN1Q9Y657 262 aaPredicted RBP2.13□□□□□ -2.07
ECHDC1-219ENST00000526299 F9P00740 461 aa2.12□□□□□ -2.07
ECHDC1-219ENST00000526299 POLBP06746 335 aa2.12□□□□□ -2.07
ECHDC1-219ENST00000526299 FOLR2P14207 255 aa2.12□□□□□ -2.07
ECHDC1-219ENST00000526299 CA4P22748 312 aa2.12□□□□□ -2.07
ECHDC1-219ENST00000526299 CA6P23280 308 aa2.12□□□□□ -2.07
ECHDC1-219ENST00000526299 HERV-K104P61576 105 aa2.12□□□□□ -2.07
ECHDC1-219ENST00000526299 CYCSP99999 105 aaKnown RBP2.12□□□□□ -2.07
ECHDC1-219ENST00000526299 TLE2Q04725 743 aa2.12□□□□□ -2.07
ECHDC1-219ENST00000526299 TMEM115Q12893 351 aaPredicted RBP2.12□□□□□ -2.07
ECHDC1-219ENST00000526299 GAGE2BQ13066 116 aa2.12□□□□□ -2.07
ECHDC1-219ENST00000526299 PLA2G7Q13093 441 aa2.12□□□□□ -2.07
ECHDC1-219ENST00000526299 TRPC3Q13507 836 aa2.12□□□□□ -2.07
ECHDC1-219ENST00000526299 GAGE2EQ4V326 116 aa2.12□□□□□ -2.07
ECHDC1-219ENST00000526299 XKR3Q5GH77 459 aa2.12□□□□□ -2.07
ECHDC1-219ENST00000526299 GCNT6Q5T4J0 391 aa2.12□□□□□ -2.07
ECHDC1-219ENST00000526299 SLC9C2Q5TAH2 1124 aa2.12□□□□□ -2.07
ECHDC1-219ENST00000526299 GAGE2AQ6NT46 116 aa2.12□□□□□ -2.07
ECHDC1-219ENST00000526299 LDHAL6AQ6ZMR3 332 aa2.12□□□□□ -2.07
ECHDC1-219ENST00000526299 GALNT13Q8IUC8 556 aa2.12□□□□□ -2.07
ECHDC1-219ENST00000526299 RNF168Q8IYW5 571 aaPredicted RBP2.12□□□□□ -2.07
ECHDC1-219ENST00000526299 ZBED8Q8IZ13 594 aa2.12□□□□□ -2.07
ECHDC1-219ENST00000526299 KLHL30-AS1Q8NEE0 82 aa2.12□□□□□ -2.07
ECHDC1-219ENST00000526299 NFKBIDQ8NI38 313 aa2.12□□□□□ -2.07
ECHDC1-219ENST00000526299 VANGL1Q8TAA9 524 aaPredicted RBP2.12□□□□□ -2.07
ECHDC1-219ENST00000526299 KCNG4Q8TDN1 519 aa2.12□□□□□ -2.07
ECHDC1-219ENST00000526299 INTS12Q96CB8 462 aaKnown RBP2.12□□□□□ -2.07
ECHDC1-219ENST00000526299 SLC45A3Q96JT2 553 aa2.12□□□□□ -2.07
ECHDC1-219ENST00000526299 CNOT6LQ96LI5 555 aaKnown RBP2.12□□□□□ -2.07
ECHDC1-219ENST00000526299 UBXN10Q96LJ8 280 aa2.12□□□□□ -2.07
ECHDC1-219ENST00000526299 NR1H4Q96RI1 486 aaPredicted RBP2.12□□□□□ -2.07
ECHDC1-219ENST00000526299 ZNF577Q9BSK1 485 aa2.12□□□□□ -2.07
ECHDC1-219ENST00000526299 ISCA1Q9BUE6 129 aa2.12□□□□□ -2.07
ECHDC1-219ENST00000526299 STRA6Q9BX79 667 aa2.12□□□□□ -2.07
ECHDC1-219ENST00000526299 SDR39U1Q9NRG7 319 aaPredicted RBP2.12□□□□□ -2.07
ECHDC1-219ENST00000526299 TEX10Q9NXF1 929 aaPredicted RBP2.12□□□□□ -2.07
ECHDC1-219ENST00000526299 B4GALT7Q9UBV7 327 aa2.12□□□□□ -2.07
ECHDC1-219ENST00000526299 GAGE2DQ9UEU5 116 aa2.12□□□□□ -2.07
ECHDC1-219ENST00000526299 NOL12Q9UGY1 213 aaKnown RBP eCLIP2.12□□□□□ -2.07
ECHDC1-219ENST00000526299 GRID1Q9ULK0 1009 aa2.12□□□□□ -2.07
ECHDC1-219ENST00000526299 GPR52Q9Y2T5 361 aa2.12□□□□□ -2.07
ECHDC1-219ENST00000526299 CYP46A1Q9Y6A2 500 aa2.12□□□□□ -2.07
ECHDC1-219ENST00000526299 A0A1W2PN81 502 aa2.11□□□□□ -2.07
ECHDC1-219ENST00000526299 GPRIN2O60269 458 aa2.11□□□□□ -2.07
ECHDC1-219ENST00000526299 DFFBO76075 338 aa2.11□□□□□ -2.07
ECHDC1-219ENST00000526299 CHRNA7P36544 502 aa2.11□□□□□ -2.07
ECHDC1-219ENST00000526299 HARS2P49590 506 aaKnown RBP2.11□□□□□ -2.07
ECHDC1-219ENST00000526299 OLR1P78380 273 aa2.11□□□□□ -2.07
ECHDC1-219ENST00000526299 PPP2R2BQ00005 443 aa2.11□□□□□ -2.07
ECHDC1-219ENST00000526299 POU5F1Q01860 360 aaKnown RBP2.11□□□□□ -2.07
ECHDC1-219ENST00000526299 CEBPZQ03701 1054 aaKnown RBP2.11□□□□□ -2.07
ECHDC1-219ENST00000526299 LRMPQ12912 555 aa2.11□□□□□ -2.07
ECHDC1-219ENST00000526299 RFTN1Q14699 578 aaPredicted RBP2.11□□□□□ -2.07
ECHDC1-219ENST00000526299 MTHFSDQ2M296 383 aaKnown RBP2.11□□□□□ -2.07
ECHDC1-219ENST00000526299 SOWAHCQ53LP3 525 aaPredicted RBP2.11□□□□□ -2.07
ECHDC1-219ENST00000526299 FHL5Q5TD97 284 aa2.11□□□□□ -2.07
ECHDC1-219ENST00000526299 FAM109BQ6ICB4 259 aaPredicted RBP2.11□□□□□ -2.07
ECHDC1-219ENST00000526299 VITQ6UXI7 678 aa2.11□□□□□ -2.07
ECHDC1-219ENST00000526299 CEACAM19Q7Z692 300 aa2.11□□□□□ -2.07
ECHDC1-219ENST00000526299 KIRREL3Q8IZU9 778 aa2.11□□□□□ -2.07
ECHDC1-219ENST00000526299 GPD1LQ8N335 351 aa2.11□□□□□ -2.07
ECHDC1-219ENST00000526299 PARP8Q8N3A8 854 aa2.11□□□□□ -2.07
ECHDC1-219ENST00000526299 CPSF7Q8N684 471 aaKnown RBP2.11□□□□□ -2.07
ECHDC1-219ENST00000526299 AQP11Q8NBQ7 271 aa2.11□□□□□ -2.07
ECHDC1-219ENST00000526299 OR10G8Q8NGN5 311 aa2.11□□□□□ -2.07
ECHDC1-219ENST00000526299 SGCDQ92629 289 aa2.11□□□□□ -2.07
ECHDC1-219ENST00000526299 ZKSCAN4Q969J2 545 aaPredicted RBP2.11□□□□□ -2.07
ECHDC1-219ENST00000526299 ZNF486Q96H40 463 aaPredicted RBP2.11□□□□□ -2.07
ECHDC1-219ENST00000526299 NUDCD1Q96RS6 583 aa2.11□□□□□ -2.07
ECHDC1-219ENST00000526299 MAP7D2Q96T17 732 aa2.11□□□□□ -2.07
ECHDC1-219ENST00000526299 PIP5K1AQ99755 562 aa2.11□□□□□ -2.07
ECHDC1-219ENST00000526299 SCPEP1Q9HB40 452 aa2.11□□□□□ -2.07
ECHDC1-219ENST00000526299 NPAP1Q9NZP6 1156 aa2.11□□□□□ -2.07
ECHDC1-219ENST00000526299 ZNF107Q9UII5 783 aaPredicted RBP2.11□□□□□ -2.07
ECHDC1-219ENST00000526299 PNMA2Q9UL42 364 aa2.11□□□□□ -2.07
ECHDC1-219ENST00000526299 TMEM8BA6NDV4 472 aa2.1□□□□□ -2.07
ECHDC1-219ENST00000526299 A8MXK9 166 aa2.1□□□□□ -2.07
ECHDC1-219ENST00000526299 GPC4O75487 556 aa2.1□□□□□ -2.07
ECHDC1-219ENST00000526299 NDUFS3O75489 264 aa2.1□□□□□ -2.07
ECHDC1-219ENST00000526299 UBL4AP11441 157 aa2.1□□□□□ -2.07
ECHDC1-219ENST00000526299 KLK2P20151 261 aa2.1□□□□□ -2.07
ECHDC1-219ENST00000526299 BCL3P20749 454 aa2.1□□□□□ -2.07
ECHDC1-219ENST00000526299 IL4RP24394 825 aa2.1□□□□□ -2.07
ECHDC1-219ENST00000526299 ABCD3P28288 659 aa2.1□□□□□ -2.07
ECHDC1-219ENST00000526299 ICAM3P32942 547 aa2.1□□□□□ -2.07
ECHDC1-219ENST00000526299 DRD3P35462 400 aa2.1□□□□□ -2.07
ECHDC1-219ENST00000526299 ZFP36L2P47974 494 aaKnown RBP2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms