RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 ZCCHC23Q6ZST2 131 aa6.96□□□□□ -1.3
VPS11-201ENST00000524454 ACAD11Q709F0 780 aa6.96□□□□□ -1.3
VPS11-201ENST00000524454 ZNF765Q7L2R6 523 aa6.96□□□□□ -1.3
VPS11-201ENST00000524454 TRIM46Q7Z4K8 759 aa6.96□□□□□ -1.3
VPS11-201ENST00000524454 NLRP8Q86W28 1048 aa6.96□□□□□ -1.3
VPS11-201ENST00000524454 CAMK1DQ8IU85 385 aa6.96□□□□□ -1.3
VPS11-201ENST00000524454 PIANPQ8IYJ0 282 aa6.96□□□□□ -1.3
VPS11-201ENST00000524454 NRSN1Q8IZ57 195 aa6.96□□□□□ -1.3
VPS11-201ENST00000524454 NXPE1Q8N323 547 aa6.96□□□□□ -1.3
VPS11-201ENST00000524454 RYBPQ8N488 228 aaPredicted RBP6.96□□□□□ -1.3
VPS11-201ENST00000524454 MINDY1Q8N5J2 469 aa6.96□□□□□ -1.3
VPS11-201ENST00000524454 CPSF7Q8N684 471 aaKnown RBP6.96□□□□□ -1.3
VPS11-201ENST00000524454 TMIEQ8NEW7 156 aa6.96□□□□□ -1.3
VPS11-201ENST00000524454 CADM4Q8NFZ8 388 aa6.96□□□□□ -1.3
VPS11-201ENST00000524454 CD200R1Q8TD46 325 aa6.96□□□□□ -1.3
VPS11-201ENST00000524454 ACTRT2Q8TDY3 377 aa6.96□□□□□ -1.3
VPS11-201ENST00000524454 CMTM5Q96DZ9 223 aa6.96□□□□□ -1.3
VPS11-201ENST00000524454 NSL1Q96IY1 281 aa6.96□□□□□ -1.3
VPS11-201ENST00000524454 SLC6A18Q96N87 628 aa6.96□□□□□ -1.3
VPS11-201ENST00000524454 PANX3Q96QZ0 392 aa6.96□□□□□ -1.3
VPS11-201ENST00000524454 NDNQ99608 321 aa6.96□□□□□ -1.3
VPS11-201ENST00000524454 MYOCQ99972 504 aa6.96□□□□□ -1.3
VPS11-201ENST00000524454 ORAI3Q9BRQ5 295 aa6.96□□□□□ -1.3
VPS11-201ENST00000524454 RTKNQ9BST9 563 aa6.96□□□□□ -1.3
VPS11-201ENST00000524454 C20orf27Q9GZN8 174 aa6.96□□□□□ -1.3
VPS11-201ENST00000524454 CLPBQ9H078 707 aa6.96□□□□□ -1.3
VPS11-201ENST00000524454 ZDHHC6Q9H6R6 413 aa6.96□□□□□ -1.3
VPS11-201ENST00000524454 SUDS3Q9H7L9 328 aaPredicted RBP6.96□□□□□ -1.3
VPS11-201ENST00000524454 CAAP1Q9H8G2 361 aa6.96□□□□□ -1.3
VPS11-201ENST00000524454 FBRSQ9HAH7 460 aa6.96□□□□□ -1.3
VPS11-201ENST00000524454 CAPN10Q9HC96 672 aa6.96□□□□□ -1.3
VPS11-201ENST00000524454 TM9SF3Q9HD45 589 aa6.96□□□□□ -1.3
VPS11-201ENST00000524454 TCF7L2Q9NQB0 619 aa6.96□□□□□ -1.3
VPS11-201ENST00000524454 ZNF358Q9NW07 568 aa6.96□□□□□ -1.3
VPS11-201ENST00000524454 NDE1Q9NXR1 346 aa6.96□□□□□ -1.3
VPS11-201ENST00000524454 PKD2L2Q9NZM6 624 aa6.96□□□□□ -1.3
VPS11-201ENST00000524454 CPSF2Q9P2I0 782 aaKnown RBP6.96□□□□□ -1.3
VPS11-201ENST00000524454 EVLQ9UI08 416 aaPredicted RBP6.96□□□□□ -1.3
VPS11-201ENST00000524454 PPM1HQ9ULR3 514 aa6.96□□□□□ -1.3
VPS11-201ENST00000524454 CA5BQ9Y2D0 317 aa6.96□□□□□ -1.3
VPS11-201ENST00000524454 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.96□□□□□ -1.3
VPS11-201ENST00000524454 DHRS7Q9Y394 339 aa6.96□□□□□ -1.3
VPS11-201ENST00000524454 TNPO3Q9Y5L0 923 aaKnown RBP6.96□□□□□ -1.3
VPS11-201ENST00000524454 LAMA1P25391 3075 aa6.96□□□□□ -1.3
VPS11-201ENST00000524454 GON4LQ3T8J9 2241 aa6.96□□□□□ -1.3
VPS11-201ENST00000524454 SPTBN4Q9H254 2564 aa6.95□□□□□ -1.3
VPS11-201ENST00000524454 LRRK1Q38SD2 2015 aa6.95□□□□□ -1.3
VPS11-201ENST00000524454 TBC1D3DA0A087WVF3 549 aa6.95□□□□□ -1.3
VPS11-201ENST00000524454 TBC1D3IA0A087WXS9 549 aa6.95□□□□□ -1.3
VPS11-201ENST00000524454 TBC1D3EA0A087X179 549 aa6.95□□□□□ -1.3
VPS11-201ENST00000524454 TBC1D3KA0A087X1G2 549 aa6.95□□□□□ -1.3
VPS11-201ENST00000524454 A0A1B0GTW7 788 aa6.95□□□□□ -1.3
VPS11-201ENST00000524454 UBA6A0AVT1 1052 aaPredicted RBP6.95□□□□□ -1.3
VPS11-201ENST00000524454 TBC1D3FA6NER0 549 aaPredicted RBP6.95□□□□□ -1.3
VPS11-201ENST00000524454 OR51F1A6NGY5 319 aa6.95□□□□□ -1.3
VPS11-201ENST00000524454 UPK3BL1B0FP48 263 aa6.95□□□□□ -1.3
VPS11-201ENST00000524454 TBC1D3LB9A6J9 549 aa6.95□□□□□ -1.3
VPS11-201ENST00000524454 E5RI56 91 aa6.95□□□□□ -1.3
VPS11-201ENST00000524454 UPK3BL2E5RIL1 263 aa6.95□□□□□ -1.3
VPS11-201ENST00000524454 TM4SF5O14894 197 aa6.95□□□□□ -1.3
VPS11-201ENST00000524454 BCAT2O15382 392 aaPredicted RBP6.95□□□□□ -1.3
VPS11-201ENST00000524454 ITM2AO43736 263 aa6.95□□□□□ -1.3
VPS11-201ENST00000524454 LEFTY1O75610 366 aa6.95□□□□□ -1.3
VPS11-201ENST00000524454 MLYCDO95822 493 aa6.95□□□□□ -1.3
VPS11-201ENST00000524454 TSPAN12O95859 305 aa6.95□□□□□ -1.3
VPS11-201ENST00000524454 ENO2P09104 434 aaPredicted RBP6.95□□□□□ -1.3
VPS11-201ENST00000524454 TBC1D3HP0C7X1 549 aa6.95□□□□□ -1.3
VPS11-201ENST00000524454 PIRTP0C851 137 aa6.95□□□□□ -1.3
VPS11-201ENST00000524454 ESRRAP11474 423 aaPredicted RBP6.95□□□□□ -1.3
VPS11-201ENST00000524454 BPIP17213 487 aa6.95□□□□□ -1.3
VPS11-201ENST00000524454 SAT1P21673 171 aa6.95□□□□□ -1.3
VPS11-201ENST00000524454 DGKAP23743 735 aa6.95□□□□□ -1.3
VPS11-201ENST00000524454 ARRB2P32121 409 aa6.95□□□□□ -1.3
VPS11-201ENST00000524454 VIPR1P32241 457 aa6.95□□□□□ -1.3
VPS11-201ENST00000524454 ABCG1P45844 678 aa6.95□□□□□ -1.3
VPS11-201ENST00000524454 PIK3CGP48736 1102 aa6.95□□□□□ -1.3
VPS11-201ENST00000524454 IDH3AP50213 366 aa6.95□□□□□ -1.3
VPS11-201ENST00000524454 ATP4BP51164 291 aa6.95□□□□□ -1.3
VPS11-201ENST00000524454 CLCN7P51798 805 aa6.95□□□□□ -1.3
VPS11-201ENST00000524454 LIMK1P53667 647 aa6.95□□□□□ -1.3
VPS11-201ENST00000524454 ATXN3P54252 364 aaPredicted RBP6.95□□□□□ -1.3
VPS11-201ENST00000524454 ALDH18A1P54886 795 aaKnown RBP6.95□□□□□ -1.3
VPS11-201ENST00000524454 TAS2R38P59533 333 aa6.95□□□□□ -1.3
VPS11-201ENST00000524454 ELP6Q0PNE2 266 aa6.95□□□□□ -1.3
VPS11-201ENST00000524454 LCP2Q13094 533 aa6.95□□□□□ -1.3
VPS11-201ENST00000524454 SP140Q13342 867 aa6.95□□□□□ -1.3
VPS11-201ENST00000524454 ZRSR2Q15696 482 aaKnown RBP6.95□□□□□ -1.3
VPS11-201ENST00000524454 SPRED3Q2MJR0 410 aa6.95□□□□□ -1.3
VPS11-201ENST00000524454 SETMARQ53H47 684 aaPredicted RBP6.95□□□□□ -1.3
VPS11-201ENST00000524454 ZNF805Q5CZA5 627 aa6.95□□□□□ -1.3
VPS11-201ENST00000524454 ZRANB3Q5FWF4 1079 aa6.95□□□□□ -1.3
VPS11-201ENST00000524454 PRAMEF14Q5SWL7 426 aa6.95□□□□□ -1.3
VPS11-201ENST00000524454 ZNF678Q5SXM1 525 aa6.95□□□□□ -1.3
VPS11-201ENST00000524454 PIP5KL1Q5T9C9 394 aa6.95□□□□□ -1.3
VPS11-201ENST00000524454 TBC1D3GQ6DHY5 549 aa6.95□□□□□ -1.3
VPS11-201ENST00000524454 TBC1D3CQ6IPX1 549 aa6.95□□□□□ -1.3
VPS11-201ENST00000524454 PSAPL1Q6NUJ1 521 aa6.95□□□□□ -1.3
VPS11-201ENST00000524454 CYB5D1Q6P9G0 228 aa6.95□□□□□ -1.3
VPS11-201ENST00000524454 CRTC1Q6UUV9 634 aa6.95□□□□□ -1.3
VPS11-201ENST00000524454 NAPRTQ6XQN6 538 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms