RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 GDPD4Q6W3E5 623 aa3.72□□□□□ -1.81
SKP1-212ENST00000523966 DENND5BQ6ZUT9 1274 aa3.72□□□□□ -1.81
SKP1-212ENST00000523966 TMPRSS11FQ6ZWK6 438 aa3.72□□□□□ -1.81
SKP1-212ENST00000523966 SLFN11Q7Z7L1 901 aa3.72□□□□□ -1.81
SKP1-212ENST00000523966 RBM23Q86U06 439 aaKnown RBP3.72□□□□□ -1.81
SKP1-212ENST00000523966 L3MBTL4Q8NA19 623 aa3.72□□□□□ -1.81
SKP1-212ENST00000523966 SPDL1Q96EA4 605 aa3.72□□□□□ -1.81
SKP1-212ENST00000523966 ARSGQ96EG1 525 aa3.72□□□□□ -1.81
SKP1-212ENST00000523966 SIPA1Q96FS4 1042 aa3.72□□□□□ -1.81
SKP1-212ENST00000523966 ZMAT2Q96NC0 199 aaKnown RBP3.72□□□□□ -1.81
SKP1-212ENST00000523966 GPR88Q9GZN0 384 aa3.72□□□□□ -1.81
SKP1-212ENST00000523966 RAB6CQ9H0N0 254 aa3.72□□□□□ -1.81
SKP1-212ENST00000523966 TCF7L2Q9NQB0 619 aa3.72□□□□□ -1.81
SKP1-212ENST00000523966 ECHDC1Q9NTX5 307 aa3.72□□□□□ -1.81
SKP1-212ENST00000523966 PTTG2Q9NZH5 202 aa3.72□□□□□ -1.81
SKP1-212ENST00000523966 RHCGQ9UBD6 479 aa3.72□□□□□ -1.81
SKP1-212ENST00000523966 GIMAP2Q9UG22 337 aa3.72□□□□□ -1.81
SKP1-212ENST00000523966 TUBE1Q9UJT0 475 aa3.72□□□□□ -1.81
SKP1-212ENST00000523966 CPSF3Q9UKF6 684 aaKnown RBP3.72□□□□□ -1.81
SKP1-212ENST00000523966 SMARCA4P51532 1647 aa3.71□□□□□ -1.82
SKP1-212ENST00000523966 IGLV5-45A0A087WSX0 123 aa3.71□□□□□ -1.82
SKP1-212ENST00000523966 HYKKA2RU49 373 aa3.71□□□□□ -1.82
SKP1-212ENST00000523966 C22orf31O95567 290 aa3.71□□□□□ -1.82
SKP1-212ENST00000523966 CBLP22681 906 aa3.71□□□□□ -1.82
SKP1-212ENST00000523966 HSPA4P34932 840 aa3.71□□□□□ -1.82
SKP1-212ENST00000523966 MMP15P51511 669 aa3.71□□□□□ -1.82
SKP1-212ENST00000523966 ZNF41P51814 821 aaPredicted RBP3.71□□□□□ -1.82
SKP1-212ENST00000523966 TPD52P55327 224 aaPredicted RBP3.71□□□□□ -1.82
SKP1-212ENST00000523966 RPL24P83731 157 aaKnown RBP3.71□□□□□ -1.82
SKP1-212ENST00000523966 RBPJQ06330 500 aa3.71□□□□□ -1.82
SKP1-212ENST00000523966 RUNX1T1Q06455 604 aa3.71□□□□□ -1.82
SKP1-212ENST00000523966 MFAP5Q13361 173 aa3.71□□□□□ -1.82
SKP1-212ENST00000523966 KRBOX4Q5JUW0 171 aa3.71□□□□□ -1.82
SKP1-212ENST00000523966 STXBP5Q5T5C0 1151 aa3.71□□□□□ -1.82
SKP1-212ENST00000523966 PLA2G4FQ68DD2 849 aa3.71□□□□□ -1.82
SKP1-212ENST00000523966 ZNF852Q6ZMS4 543 aa3.71□□□□□ -1.82
SKP1-212ENST00000523966 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.71□□□□□ -1.823e-9■■□□□ 12.3
SKP1-212ENST00000523966 RBPMS2Q6ZRY4 209 aaKnown RBP3.71□□□□□ -1.82
SKP1-212ENST00000523966 MEPCEQ7L2J0 689 aaKnown RBP3.71□□□□□ -1.82
SKP1-212ENST00000523966 PIWIL4Q7Z3Z4 852 aaKnown RBP3.71□□□□□ -1.82
SKP1-212ENST00000523966 FAM114A1Q8IWE2 563 aa3.71□□□□□ -1.82
SKP1-212ENST00000523966 CFAP206Q8IYR0 622 aa3.71□□□□□ -1.82
SKP1-212ENST00000523966 XXYLT1Q8NBI6 393 aa3.71□□□□□ -1.82
SKP1-212ENST00000523966 CAMKVQ8NCB2 501 aa3.71□□□□□ -1.82
SKP1-212ENST00000523966 OR5M8Q8NGP6 311 aa3.71□□□□□ -1.82
SKP1-212ENST00000523966 KIF18AQ8NI77 898 aa3.71□□□□□ -1.82
SKP1-212ENST00000523966 SPATA20Q8TB22 786 aa3.71□□□□□ -1.82
SKP1-212ENST00000523966 SETD6Q8TBK2 473 aa3.71□□□□□ -1.82
SKP1-212ENST00000523966 CCDC107Q8WV48 283 aa3.71□□□□□ -1.82
SKP1-212ENST00000523966 ZNF558Q96NG5 402 aa3.71□□□□□ -1.82
SKP1-212ENST00000523966 SPAG5Q96R06 1193 aa3.71□□□□□ -1.82
SKP1-212ENST00000523966 OLFM1Q99784 485 aa3.71□□□□□ -1.82
SKP1-212ENST00000523966 EGFL8Q99944 293 aa3.71□□□□□ -1.82
SKP1-212ENST00000523966 NAA11Q9BSU3 229 aaPredicted RBP3.71□□□□□ -1.82
SKP1-212ENST00000523966 TRAF4Q9BUZ4 470 aaPredicted RBP3.71□□□□□ -1.82
SKP1-212ENST00000523966 ABHD6Q9BV23 337 aa3.71□□□□□ -1.82
SKP1-212ENST00000523966 SLC25A23Q9BV35 468 aa3.71□□□□□ -1.82
SKP1-212ENST00000523966 PANK2Q9BZ23 570 aa3.71□□□□□ -1.82
SKP1-212ENST00000523966 APOBEC3GQ9HC16 384 aaKnown RBP3.71□□□□□ -1.82
SKP1-212ENST00000523966 ZCCHC17Q9NP64 241 aaKnown RBP3.71□□□□□ -1.82
SKP1-212ENST00000523966 KLHL1Q9NR64 748 aa3.71□□□□□ -1.82
SKP1-212ENST00000523966 PADI2Q9Y2J8 665 aa3.71□□□□□ -1.82
SKP1-212ENST00000523966 A0A1W2PPI3 338 aa3.7□□□□□ -1.82
SKP1-212ENST00000523966 PRR32B1ATL7 298 aa3.7□□□□□ -1.82
SKP1-212ENST00000523966 CTSVO60911 334 aa3.7□□□□□ -1.82
SKP1-212ENST00000523966 GCNT3O95395 438 aa3.7□□□□□ -1.82
SKP1-212ENST00000523966 BAG4O95429 457 aaKnown RBP3.7□□□□□ -1.82
SKP1-212ENST00000523966 HSPA4LO95757 839 aa3.7□□□□□ -1.82
SKP1-212ENST00000523966 IGHV4-39P01824 125 aa3.7□□□□□ -1.82
SKP1-212ENST00000523966 CRYAAP02489 173 aa3.7□□□□□ -1.82
SKP1-212ENST00000523966 SCG2P13521 617 aa3.7□□□□□ -1.82
SKP1-212ENST00000523966 EPHA2P29317 976 aa3.7□□□□□ -1.82
SKP1-212ENST00000523966 SLC6A6P31641 620 aa3.7□□□□□ -1.82
SKP1-212ENST00000523966 RPL36AP83881 106 aaKnown RBP3.7□□□□□ -1.82
SKP1-212ENST00000523966 MBTD1Q05BQ5 628 aa3.7□□□□□ -1.82
SKP1-212ENST00000523966 PRKAA1Q13131 559 aa3.7□□□□□ -1.82
SKP1-212ENST00000523966 KIR2DS3Q14952 304 aa3.7□□□□□ -1.82
SKP1-212ENST00000523966 WBP2NLQ6ICG8 309 aa3.7□□□□□ -1.82
SKP1-212ENST00000523966 FAM198BQ6UWH4 519 aa3.7□□□□□ -1.82
SKP1-212ENST00000523966 ERN2Q76MJ5 926 aaKnown RBP3.7□□□□□ -1.82
SKP1-212ENST00000523966 DSG4Q86SJ6 1040 aa3.7□□□□□ -1.82
SKP1-212ENST00000523966 ZNF595Q8IYB9 648 aa3.7□□□□□ -1.82
SKP1-212ENST00000523966 THNSL1Q8IYQ7 743 aa3.7□□□□□ -1.82
SKP1-212ENST00000523966 ZNF611Q8N823 705 aa3.7□□□□□ -1.82
SKP1-212ENST00000523966 PI4KAP1Q8N8J0 262 aa3.7□□□□□ -1.82
SKP1-212ENST00000523966 IQUBQ8NA54 791 aa3.7□□□□□ -1.82
SKP1-212ENST00000523966 STAMBPL1Q96FJ0 436 aa3.7□□□□□ -1.82
SKP1-212ENST00000523966 SCRN2Q96FV2 425 aa3.7□□□□□ -1.82
SKP1-212ENST00000523966 NSL1Q96IY1 281 aa3.7□□□□□ -1.82
SKP1-212ENST00000523966 SGK494Q96LW2 274 aa3.7□□□□□ -1.82
SKP1-212ENST00000523966 FERMT1Q9BQL6 677 aa3.7□□□□□ -1.82
SKP1-212ENST00000523966 BTBD10Q9BSF8 475 aa3.7□□□□□ -1.82
SKP1-212ENST00000523966 ZBTB20Q9HC78 741 aaPredicted RBP3.7□□□□□ -1.82
SKP1-212ENST00000523966 WWOXQ9NZC7 414 aa3.7□□□□□ -1.82
SKP1-212ENST00000523966 TBC1D7Q9P0N9 293 aa3.7□□□□□ -1.82
SKP1-212ENST00000523966 C5AR2Q9P296 337 aa3.7□□□□□ -1.82
SKP1-212ENST00000523966 SLC7A7Q9UM01 511 aa3.7□□□□□ -1.82
SKP1-212ENST00000523966 SMARCA2P51531 1590 aa3.69□□□□□ -1.82
SKP1-212ENST00000523966 TEX13DA0A0J9YY54 714 aaPredicted RBP3.69□□□□□ -1.82
SKP1-212ENST00000523966 A0A1W2PRB8 838 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms