RNA–Protein interactions for RNA: ENST00000523952.5

PTPN12-216, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-216ENST00000523952 DPCR1Q3MIW9 517 aa9.02□□□□□ -0.97
PTPN12-216ENST00000523952 ATP13A5Q4VNC0 1218 aa9.02□□□□□ -0.97
PTPN12-216ENST00000523952 LDLRAP1Q5SW96 308 aa9.02□□□□□ -0.97
PTPN12-216ENST00000523952 FNBP1LQ5T0N5 605 aa9.02□□□□□ -0.97
PTPN12-216ENST00000523952 ZFYVE27Q5T4F4 411 aa9.02□□□□□ -0.97
PTPN12-216ENST00000523952 XKRXQ6PP77 449 aa9.02□□□□□ -0.97
PTPN12-216ENST00000523952 FAM83HQ6ZRV2 1179 aaPredicted RBP9.02□□□□□ -0.97
PTPN12-216ENST00000523952 LINC00696Q6ZRV3 163 aa9.02□□□□□ -0.97
PTPN12-216ENST00000523952 TMC3Q7Z5M5 1100 aa9.02□□□□□ -0.97
PTPN12-216ENST00000523952 PPP1R32Q7Z5V6 425 aa9.02□□□□□ -0.97
PTPN12-216ENST00000523952 CEP97Q8IW35 865 aa9.02□□□□□ -0.97
PTPN12-216ENST00000523952 OR1N1Q8NGS0 311 aa9.02□□□□□ -0.97
PTPN12-216ENST00000523952 PROKR1Q8TCW9 393 aa9.02□□□□□ -0.97
PTPN12-216ENST00000523952 LCN9Q8WX39 176 aa9.02□□□□□ -0.97
PTPN12-216ENST00000523952 TRIM11Q96F44 468 aa9.02□□□□□ -0.97
PTPN12-216ENST00000523952 INSM2Q96T92 566 aaPredicted RBP9.02□□□□□ -0.97
PTPN12-216ENST00000523952 SLX1AQ9BQ83 275 aa9.02□□□□□ -0.97
PTPN12-216ENST00000523952 TRIM7Q9C029 511 aa9.02□□□□□ -0.97
PTPN12-216ENST00000523952 KLHL25Q9H0H3 589 aa9.02□□□□□ -0.97
PTPN12-216ENST00000523952 KIR3DX1Q9H7L2 352 aa9.02□□□□□ -0.97
PTPN12-216ENST00000523952 CBX8Q9HC52 389 aa9.02□□□□□ -0.97
PTPN12-216ENST00000523952 SLC6A20Q9NP91 592 aa9.02□□□□□ -0.97
PTPN12-216ENST00000523952 FBXL4Q9UKA2 621 aa9.02□□□□□ -0.97
PTPN12-216ENST00000523952 ACSL5Q9ULC5 683 aa9.02□□□□□ -0.97
PTPN12-216ENST00000523952 CDYLQ9Y232 598 aa9.02□□□□□ -0.97
PTPN12-216ENST00000523952 DNMT3AQ9Y6K1 912 aaPredicted RBP9.02□□□□□ -0.97
PTPN12-216ENST00000523952 DYTNA2CJ06 578 aa9.01□□□□□ -0.97
PTPN12-216ENST00000523952 C2orf74A8MZ97 194 aa9.01□□□□□ -0.97
PTPN12-216ENST00000523952 PRICKLE3O43900 615 aaPredicted RBP9.01□□□□□ -0.97
PTPN12-216ENST00000523952 ALOX12BO75342 701 aa9.01□□□□□ -0.97
PTPN12-216ENST00000523952 UNC5CO95185 931 aa9.01□□□□□ -0.97
PTPN12-216ENST00000523952 FTLP02792 175 aaPredicted RBP9.01□□□□□ -0.97
PTPN12-216ENST00000523952 MSL3P1P0C860 447 aa9.01□□□□□ -0.97
PTPN12-216ENST00000523952 PRDX3P30048 256 aaKnown RBP9.01□□□□□ -0.97
PTPN12-216ENST00000523952 GJC1P36383 396 aa9.01□□□□□ -0.97
PTPN12-216ENST00000523952 UBXN1Q04323 297 aa9.01□□□□□ -0.97
PTPN12-216ENST00000523952 PIGHQ14442 188 aaPredicted RBP9.01□□□□□ -0.97
PTPN12-216ENST00000523952 IHHQ14623 411 aa9.01□□□□□ -0.97
PTPN12-216ENST00000523952 KRT31Q15323 416 aa9.01□□□□□ -0.97
PTPN12-216ENST00000523952 HADHQ16836 314 aaKnown RBP9.01□□□□□ -0.97
PTPN12-216ENST00000523952 LONRF2Q1L5Z9 754 aa9.01□□□□□ -0.97
PTPN12-216ENST00000523952 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.01□□□□□ -0.97
PTPN12-216ENST00000523952 ZNF789Q5FWF6 425 aa9.01□□□□□ -0.97
PTPN12-216ENST00000523952 ZDHHC20Q5W0Z9 365 aa9.01□□□□□ -0.97
PTPN12-216ENST00000523952 METRNLQ641Q3 311 aa9.01□□□□□ -0.97
PTPN12-216ENST00000523952 ISLR2Q6UXK2 745 aa9.01□□□□□ -0.97
PTPN12-216ENST00000523952 DET1Q7L5Y6 550 aa9.01□□□□□ -0.97
PTPN12-216ENST00000523952 NT5DC3Q86UY8 548 aa9.01□□□□□ -0.97
PTPN12-216ENST00000523952 RASGEF1AQ8N9B8 481 aa9.01□□□□□ -0.97
PTPN12-216ENST00000523952 ACVR1CQ8NER5 493 aa9.01□□□□□ -0.97
PTPN12-216ENST00000523952 EID2BQ96D98 161 aa9.01□□□□□ -0.97
PTPN12-216ENST00000523952 THOC3Q96J01 351 aaKnown RBP9.01□□□□□ -0.97
PTPN12-216ENST00000523952 FERD3LQ96RJ6 166 aa9.01□□□□□ -0.97
PTPN12-216ENST00000523952 NDC1Q9BTX1 674 aa9.01□□□□□ -0.97
PTPN12-216ENST00000523952 LHPPQ9H008 270 aa9.01□□□□□ -0.97
PTPN12-216ENST00000523952 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.01□□□□□ -0.97
PTPN12-216ENST00000523952 INTS1Q8N201 2190 aaKnown RBP9□□□□□ -0.97
PTPN12-216ENST00000523952 CCDC78A2IDD5 438 aa9□□□□□ -0.97
PTPN12-216ENST00000523952 KLHL33A6NCF5 533 aa9□□□□□ -0.97
PTPN12-216ENST00000523952 BHMG1C9JSJ3 638 aaPredicted RBP9□□□□□ -0.97
PTPN12-216ENST00000523952 KCNK1O00180 336 aa9□□□□□ -0.97
PTPN12-216ENST00000523952 PCDH17O14917 1159 aa9□□□□□ -0.97
PTPN12-216ENST00000523952 POLBP06746 335 aa9□□□□□ -0.97
PTPN12-216ENST00000523952 MYBL1P10243 752 aa9□□□□□ -0.97
PTPN12-216ENST00000523952 PYGMP11217 842 aa9□□□□□ -0.97
PTPN12-216ENST00000523952 PIM1P11309 404 aaPredicted RBP9□□□□□ -0.97
PTPN12-216ENST00000523952 PVRP15151 417 aa9□□□□□ -0.97
PTPN12-216ENST00000523952 TCF4P15884 667 aa9□□□□□ -0.97
PTPN12-216ENST00000523952 ALAS2P22557 587 aa9□□□□□ -0.97
PTPN12-216ENST00000523952 SPAM1P38567 509 aa9□□□□□ -0.97
PTPN12-216ENST00000523952 PBX1P40424 430 aa9□□□□□ -0.97
PTPN12-216ENST00000523952 CTSCP53634 463 aa9□□□□□ -0.97
PTPN12-216ENST00000523952 TLE4Q04727 773 aa9□□□□□ -0.97
PTPN12-216ENST00000523952 ITGA9Q13797 1035 aa9□□□□□ -0.97
PTPN12-216ENST00000523952 PAFAH1B3Q15102 231 aaKnown RBP9□□□□□ -0.97
PTPN12-216ENST00000523952 TESK1Q15569 626 aa9□□□□□ -0.97
PTPN12-216ENST00000523952 RBBP7Q16576 425 aa9□□□□□ -0.97
PTPN12-216ENST00000523952 DEFB110Q30KQ9 67 aa9□□□□□ -0.97
PTPN12-216ENST00000523952 TUBB8Q3ZCM7 444 aa9□□□□□ -0.97
PTPN12-216ENST00000523952 NKAIN1Q4KMZ8 207 aa9□□□□□ -0.97
PTPN12-216ENST00000523952 ZNF385CQ66K41 422 aaPredicted RBP9□□□□□ -0.97
PTPN12-216ENST00000523952 NCBP2-AS2Q69YL0 99 aa9□□□□□ -0.97
PTPN12-216ENST00000523952 FAAH2Q6GMR7 532 aa9□□□□□ -0.97
PTPN12-216ENST00000523952 RHBDD2Q6NTF9 364 aa9□□□□□ -0.97
PTPN12-216ENST00000523952 RPUSD3Q6P087 351 aaKnown RBP9□□□□□ -0.97
PTPN12-216ENST00000523952 ZNF449Q6P9G9 518 aa9□□□□□ -0.97
PTPN12-216ENST00000523952 FAM151BQ6UXP7 276 aa9□□□□□ -0.97
PTPN12-216ENST00000523952 CDHR3Q6ZTQ4 885 aa9□□□□□ -0.97
PTPN12-216ENST00000523952 KCTD6Q8NC69 237 aa9□□□□□ -0.97
PTPN12-216ENST00000523952 CCDC110Q8TBZ0 833 aa9□□□□□ -0.97
PTPN12-216ENST00000523952 LRRN4Q8WUT4 740 aa9□□□□□ -0.97
PTPN12-216ENST00000523952 NR4A3Q92570 626 aa9□□□□□ -0.97
PTPN12-216ENST00000523952 FATE1Q969F0 183 aa9□□□□□ -0.97
PTPN12-216ENST00000523952 TBRG4Q969Z0 631 aaKnown RBP eCLIP9□□□□□ -0.977e-6■■■■■ 27.5
PTPN12-216ENST00000523952 RBM41Q96IZ5 413 aaKnown RBP9□□□□□ -0.97
PTPN12-216ENST00000523952 TSGA13Q96PP4 275 aa9□□□□□ -0.97
PTPN12-216ENST00000523952 DHCR7Q9UBM7 475 aaKnown RBP9□□□□□ -0.97
PTPN12-216ENST00000523952 SEC14L3Q9UDX4 400 aa9□□□□□ -0.97
PTPN12-216ENST00000523952 ANKHD1Q8IWZ3 2542 aaKnown RBP9□□□□□ -0.97
PTPN12-216ENST00000523952 SPG11Q96JI7 2443 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms