RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 FBXO39Q8N4B4 442 aa12.24□□□□□ -0.45
VEGFA-225ENST00000523950 C2CD4AQ8NCU7 369 aaPredicted RBP12.24□□□□□ -0.45
VEGFA-225ENST00000523950 GSDMBQ8TAX9 411 aa12.24□□□□□ -0.45
VEGFA-225ENST00000523950 ZCCHC14Q8WYQ9 949 aaKnown RBP12.24□□□□□ -0.45
VEGFA-225ENST00000523950 SEC14L1Q92503 715 aa12.24□□□□□ -0.45
VEGFA-225ENST00000523950 ART4Q93070 314 aa12.24□□□□□ -0.45
VEGFA-225ENST00000523950 ZDHHC12Q96GR4 267 aa12.24□□□□□ -0.45
VEGFA-225ENST00000523950 CCDC74BQ96LY2 380 aa12.24□□□□□ -0.45
VEGFA-225ENST00000523950 ZNF578Q96N58 590 aaPredicted RBP12.24□□□□□ -0.45
VEGFA-225ENST00000523950 CNTNAP3BQ96NU0 1288 aa12.24□□□□□ -0.45
VEGFA-225ENST00000523950 FERD3LQ96RJ6 166 aa12.24□□□□□ -0.45
VEGFA-225ENST00000523950 CD180Q99467 661 aa12.24□□□□□ -0.45
VEGFA-225ENST00000523950 CNTNAP3Q9BZ76 1288 aa12.24□□□□□ -0.45
VEGFA-225ENST00000523950 FAM129AQ9BZQ8 928 aa12.24□□□□□ -0.45
VEGFA-225ENST00000523950 B3GNT4Q9C0J1 378 aa12.24□□□□□ -0.45
VEGFA-225ENST00000523950 TRIT1Q9H3H1 467 aaKnown RBP12.24□□□□□ -0.45
VEGFA-225ENST00000523950 TFB2MQ9H5Q4 396 aaKnown RBP12.24□□□□□ -0.45
VEGFA-225ENST00000523950 LATS2Q9NRM7 1088 aa12.24□□□□□ -0.45
VEGFA-225ENST00000523950 OGFRQ9NZT2 677 aa12.24□□□□□ -0.45
VEGFA-225ENST00000523950 POLG2Q9UHN1 485 aa12.24□□□□□ -0.45
VEGFA-225ENST00000523950 CRYL1Q9Y2S2 319 aa12.24□□□□□ -0.45
VEGFA-225ENST00000523950 LOXL2Q9Y4K0 774 aa12.24□□□□□ -0.45
VEGFA-225ENST00000523950 CFAP20Q9Y6A4 193 aaKnown RBP12.24□□□□□ -0.45
VEGFA-225ENST00000523950 SPEGQ15772 3267 aa12.24□□□□□ -0.45
VEGFA-225ENST00000523950 IQCF5A8MTL0 148 aa12.23□□□□□ -0.45
VEGFA-225ENST00000523950 BHMG1C9JSJ3 638 aaPredicted RBP12.23□□□□□ -0.45
VEGFA-225ENST00000523950 E5RI56 91 aa12.23□□□□□ -0.45
VEGFA-225ENST00000523950 BRINP1O60477 761 aa12.23□□□□□ -0.45
VEGFA-225ENST00000523950 BANF1O75531 89 aa12.23□□□□□ -0.45
VEGFA-225ENST00000523950 MPOP05164 745 aa12.23□□□□□ -0.45
VEGFA-225ENST00000523950 ITGA2BP08514 1039 aa12.23□□□□□ -0.45
VEGFA-225ENST00000523950 JMJD7P0C870 316 aa12.23□□□□□ -0.45
VEGFA-225ENST00000523950 TYRP1P17643 537 aa12.23□□□□□ -0.45
VEGFA-225ENST00000523950 ITGB6P18564 788 aa12.23□□□□□ -0.45
VEGFA-225ENST00000523950 RBMS1P29558 406 aaKnown RBP12.23□□□□□ -0.45
VEGFA-225ENST00000523950 CSTF2P33240 577 aaKnown RBP eCLIP12.23□□□□□ -0.45
VEGFA-225ENST00000523950 LEPRP48357 1165 aaKnown RBP12.23□□□□□ -0.45
VEGFA-225ENST00000523950 MRPS25P82663 173 aaKnown RBP12.23□□□□□ -0.45
VEGFA-225ENST00000523950 CYP4F3Q08477 520 aa12.23□□□□□ -0.45
VEGFA-225ENST00000523950 CTBP1Q13363 440 aa12.23□□□□□ -0.45
VEGFA-225ENST00000523950 TTLL9Q3SXZ7 439 aa12.23□□□□□ -0.45
VEGFA-225ENST00000523950 UNC5DQ6UXZ4 953 aa12.23□□□□□ -0.45
VEGFA-225ENST00000523950 CEP128Q6ZU80 1094 aa12.23□□□□□ -0.45
VEGFA-225ENST00000523950 ARHGAP22Q7Z5H3 698 aa12.23□□□□□ -0.45
VEGFA-225ENST00000523950 IGDCC3Q8IVU1 814 aa12.23□□□□□ -0.45
VEGFA-225ENST00000523950 CARFQ8N187 725 aa12.23□□□□□ -0.45
VEGFA-225ENST00000523950 KRT222Q8N1A0 295 aa12.23□□□□□ -0.45
VEGFA-225ENST00000523950 AGBL5Q8NDL9 886 aa12.23□□□□□ -0.45
VEGFA-225ENST00000523950 FBXO36Q8NEA4 188 aa12.23□□□□□ -0.45
VEGFA-225ENST00000523950 OR5K2Q8NHB8 316 aa12.23□□□□□ -0.45
VEGFA-225ENST00000523950 LKAAEAR1Q8TD35 194 aa12.23□□□□□ -0.45
VEGFA-225ENST00000523950 RSC1A1Q92681 617 aa12.23□□□□□ -0.45
VEGFA-225ENST00000523950 KCNJ9Q92806 393 aa12.23□□□□□ -0.45
VEGFA-225ENST00000523950 C9orf72Q96LT7 481 aa12.23□□□□□ -0.45
VEGFA-225ENST00000523950 PWWP2AQ96N64 755 aa12.23□□□□□ -0.45
VEGFA-225ENST00000523950 WDR83Q9BRX9 315 aaKnown RBP12.23□□□□□ -0.45
VEGFA-225ENST00000523950 FBXO6Q9NRD1 293 aaPredicted RBP12.23□□□□□ -0.45
VEGFA-225ENST00000523950 THSD1Q9NS62 852 aa12.23□□□□□ -0.45
VEGFA-225ENST00000523950 IARS2Q9NSE4 1012 aaKnown RBP12.23□□□□□ -0.45
VEGFA-225ENST00000523950 IL1RAPL1Q9NZN1 696 aa12.23□□□□□ -0.45
VEGFA-225ENST00000523950 CORO1CQ9ULV4 474 aaPredicted RBP12.23□□□□□ -0.45
VEGFA-225ENST00000523950 CDYLQ9Y232 598 aa12.23□□□□□ -0.45
VEGFA-225ENST00000523950 ASF1AQ9Y294 204 aa12.23□□□□□ -0.45
VEGFA-225ENST00000523950 PRAMEF33A0A0G2JMD5 474 aa12.22□□□□□ -0.45
VEGFA-225ENST00000523950 OR5K3A6NET4 321 aa12.22□□□□□ -0.45
VEGFA-225ENST00000523950 EIF3FO00303 357 aaPredicted RBP12.22□□□□□ -0.45
VEGFA-225ENST00000523950 CAPN5O15484 640 aaPredicted RBP12.22□□□□□ -0.45
VEGFA-225ENST00000523950 NIPSNAP2O75323 286 aa12.22□□□□□ -0.45
VEGFA-225ENST00000523950 GSTA2P09210 222 aa12.22□□□□□ -0.45
VEGFA-225ENST00000523950 ERVK-10P10266 1014 aa12.22□□□□□ -0.45
VEGFA-225ENST00000523950 CHRM3P20309 590 aa12.22□□□□□ -0.45
VEGFA-225ENST00000523950 SHMT2P34897 504 aa12.22□□□□□ -0.45
VEGFA-225ENST00000523950 PLTPP55058 493 aa12.22□□□□□ -0.45
VEGFA-225ENST00000523950 PRKAA1Q13131 559 aa12.22□□□□□ -0.45
VEGFA-225ENST00000523950 GBX1Q14549 363 aa12.22□□□□□ -0.45
VEGFA-225ENST00000523950 C16orf72Q14CZ0 275 aa12.22□□□□□ -0.45
VEGFA-225ENST00000523950 BRD3Q15059 726 aa12.22□□□□□ -0.45
VEGFA-225ENST00000523950 TBC1D25Q3MII6 688 aa12.22□□□□□ -0.45
VEGFA-225ENST00000523950 ZNF789Q5FWF6 425 aa12.22□□□□□ -0.45
VEGFA-225ENST00000523950 UGT3A1Q6NUS8 523 aa12.22□□□□□ -0.45
VEGFA-225ENST00000523950 ARMC6Q6NXE6 501 aa12.22□□□□□ -0.45
VEGFA-225ENST00000523950 PRSS42Q7Z5A4 293 aa12.22□□□□□ -0.45
VEGFA-225ENST00000523950 CLEC14AQ86T13 490 aa12.22□□□□□ -0.45
VEGFA-225ENST00000523950 PROSER1Q86XN7 944 aa12.22□□□□□ -0.45
VEGFA-225ENST00000523950 DCUN1D3Q8IWE4 304 aa12.22□□□□□ -0.45
VEGFA-225ENST00000523950 ZBED8Q8IZ13 594 aa12.22□□□□□ -0.45
VEGFA-225ENST00000523950 SNIP1Q8TAD8 396 aaKnown RBP12.22□□□□□ -0.45
VEGFA-225ENST00000523950 MDM1Q8TC05 714 aa12.22□□□□□ -0.45
VEGFA-225ENST00000523950 PYROXD1Q8WU10 500 aa12.22□□□□□ -0.45
VEGFA-225ENST00000523950 CFAP36Q96G28 342 aa12.22□□□□□ -0.45
VEGFA-225ENST00000523950 PRR11Q96HE9 360 aaPredicted RBP12.22□□□□□ -0.45
VEGFA-225ENST00000523950 SLC46A1Q96NT5 459 aa12.22□□□□□ -0.45
VEGFA-225ENST00000523950 LRRC1Q9BTT6 524 aa12.22□□□□□ -0.45
VEGFA-225ENST00000523950 PLAC1Q9HBJ0 212 aa12.22□□□□□ -0.45
VEGFA-225ENST00000523950 PPANQ9NQ55 473 aaKnown RBP12.22□□□□□ -0.45
VEGFA-225ENST00000523950 FAM114A2Q9NRY5 505 aa12.22□□□□□ -0.45
VEGFA-225ENST00000523950 NSMCE4AQ9NXX6 385 aa12.22□□□□□ -0.45
VEGFA-225ENST00000523950 TMEM9Q9P0T7 183 aa12.22□□□□□ -0.45
VEGFA-225ENST00000523950 SEMA5BQ9P283 1151 aa12.22□□□□□ -0.45
VEGFA-225ENST00000523950 PCDHGA7Q9Y5G6 932 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms