RNA–Protein interactions for RNA: ENST00000522796.1

HMGB4-204, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGB4, Length 2,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-204ENST00000522796 ANAPC2Q9UJX6 822 aa8.17□□□□□ -1.1
HMGB4-204ENST00000522796 CRYL1Q9Y2S2 319 aa8.17□□□□□ -1.1
HMGB4-204ENST00000522796 EDC4Q6P2E9 1401 aaKnown RBP8.17□□□□□ -1.1
HMGB4-204ENST00000522796 A0A0U1RQV5 110 aa8.17□□□□□ -1.1
HMGB4-204ENST00000522796 BCLAF3A2AJT9 711 aaKnown RBP8.17□□□□□ -1.1
HMGB4-204ENST00000522796 SPDYE2BA6NHP3 402 aa8.17□□□□□ -1.1
HMGB4-204ENST00000522796 TRAF5O00463 557 aa8.17□□□□□ -1.1
HMGB4-204ENST00000522796 STX16O14662 325 aa8.17□□□□□ -1.1
HMGB4-204ENST00000522796 ACOT8O14734 319 aa8.17□□□□□ -1.1
HMGB4-204ENST00000522796 UGDHO60701 494 aa8.17□□□□□ -1.1
HMGB4-204ENST00000522796 EIF3GO75821 320 aaKnown RBP eCLIP8.17□□□□□ -1.1
HMGB4-204ENST00000522796 DEXIO95424 95 aa8.17□□□□□ -1.1
HMGB4-204ENST00000522796 NSA2O95478 260 aaKnown RBP8.17□□□□□ -1.1
HMGB4-204ENST00000522796 SPDYE6P0CI01 402 aa8.17□□□□□ -1.1
HMGB4-204ENST00000522796 COX4I1P13073 169 aa8.17□□□□□ -1.1
HMGB4-204ENST00000522796 CD1EP15812 388 aa8.17□□□□□ -1.1
HMGB4-204ENST00000522796 ZNF8P17098 575 aaPredicted RBP8.17□□□□□ -1.1
HMGB4-204ENST00000522796 ME2P23368 584 aa8.17□□□□□ -1.1
HMGB4-204ENST00000522796 CDH8P55286 799 aa8.17□□□□□ -1.1
HMGB4-204ENST00000522796 SNRPD2P62316 118 aaKnown RBP8.17□□□□□ -1.1
HMGB4-204ENST00000522796 PRKCDQ05655 676 aa8.17□□□□□ -1.1
HMGB4-204ENST00000522796 PDIA2Q13087 525 aaKnown RBP8.17□□□□□ -1.1
HMGB4-204ENST00000522796 SLAMF1Q13291 335 aa8.17□□□□□ -1.1
HMGB4-204ENST00000522796 GRAPQ13588 217 aa8.17□□□□□ -1.1
HMGB4-204ENST00000522796 IRF4Q15306 451 aa8.17□□□□□ -1.1
HMGB4-204ENST00000522796 CA9Q16790 459 aa8.17□□□□□ -1.1
HMGB4-204ENST00000522796 ZNF674Q2M3X9 581 aa8.17□□□□□ -1.1
HMGB4-204ENST00000522796 HKDC1Q2TB90 917 aa8.17□□□□□ -1.1
HMGB4-204ENST00000522796 SPDYE2Q495Y8 402 aa8.17□□□□□ -1.1
HMGB4-204ENST00000522796 NOMO2Q5JPE7 1267 aa8.17□□□□□ -1.1
HMGB4-204ENST00000522796 IFIT1BQ5T764 474 aaKnown RBP8.17□□□□□ -1.1
HMGB4-204ENST00000522796 TEDDM1Q5T9Z0 273 aa8.17□□□□□ -1.1
HMGB4-204ENST00000522796 ANGEL2Q5VTE6 544 aaKnown RBP8.17□□□□□ -1.1
HMGB4-204ENST00000522796 AFMIDQ63HM1 303 aa8.17□□□□□ -1.1
HMGB4-204ENST00000522796 SLC25A25Q6KCM7 469 aa8.17□□□□□ -1.1
HMGB4-204ENST00000522796 JMJD6Q6NYC1 403 aaPredicted RBP8.17□□□□□ -1.1
HMGB4-204ENST00000522796 USP53Q70EK8 1073 aa8.17□□□□□ -1.1
HMGB4-204ENST00000522796 R3HCC1LQ7Z5L2 792 aaKnown RBP8.17□□□□□ -1.1
HMGB4-204ENST00000522796 TMEM199Q8N511 208 aa8.17□□□□□ -1.1
HMGB4-204ENST00000522796 OR10J5Q8NHC4 309 aa8.17□□□□□ -1.1
HMGB4-204ENST00000522796 MZB1Q8WU39 189 aa8.17□□□□□ -1.1
HMGB4-204ENST00000522796 SFT2D1Q8WV19 159 aa8.17□□□□□ -1.1
HMGB4-204ENST00000522796 NSMAFQ92636 917 aa8.17□□□□□ -1.1
HMGB4-204ENST00000522796 MUL1Q969V5 352 aa8.17□□□□□ -1.1
HMGB4-204ENST00000522796 SIGLEC10Q96LC7 697 aa8.17□□□□□ -1.1
HMGB4-204ENST00000522796 GPR137Q96N19 417 aa8.17□□□□□ -1.1
HMGB4-204ENST00000522796 LINC00052Q96N35 136 aa8.17□□□□□ -1.1
HMGB4-204ENST00000522796 FAM111AQ96PZ2 611 aa8.17□□□□□ -1.1
HMGB4-204ENST00000522796 CCNL2Q96S94 520 aaPredicted RBP8.17□□□□□ -1.1
HMGB4-204ENST00000522796 DBNDD2Q9BQY9 259 aa8.17□□□□□ -1.1
HMGB4-204ENST00000522796 SF3B5Q9BWJ5 86 aaKnown RBP8.17□□□□□ -1.1
HMGB4-204ENST00000522796 ELOVL6Q9H5J4 265 aa8.17□□□□□ -1.1
HMGB4-204ENST00000522796 ABCG2Q9UNQ0 655 aa8.17□□□□□ -1.1
HMGB4-204ENST00000522796 MGAT4BQ9UQ53 548 aa8.17□□□□□ -1.1
HMGB4-204ENST00000522796 CNTNAP2Q9UHC6 1331 aa8.16□□□□□ -1.1
HMGB4-204ENST00000522796 TUBAL3A6NHL2 446 aa8.16□□□□□ -1.1
HMGB4-204ENST00000522796 USP17L5A8MUK1 530 aa8.16□□□□□ -1.1
HMGB4-204ENST00000522796 USP17L15C9J2P7 530 aa8.16□□□□□ -1.1
HMGB4-204ENST00000522796 USP17L12C9JPN9 530 aa8.16□□□□□ -1.1
HMGB4-204ENST00000522796 USP17L11C9JVI0 530 aa8.16□□□□□ -1.1
HMGB4-204ENST00000522796 USP17L21D6R901 530 aa8.16□□□□□ -1.1
HMGB4-204ENST00000522796 USP17L18D6R9N7 530 aa8.16□□□□□ -1.1
HMGB4-204ENST00000522796 USP17L22D6RA61 530 aa8.16□□□□□ -1.1
HMGB4-204ENST00000522796 USP17L19D6RCP7 530 aa8.16□□□□□ -1.1
HMGB4-204ENST00000522796 USP17L20D6RJB6 530 aa8.16□□□□□ -1.1
HMGB4-204ENST00000522796 SOCS2O14508 198 aa8.16□□□□□ -1.1
HMGB4-204ENST00000522796 FSCN2O14926 492 aa8.16□□□□□ -1.1
HMGB4-204ENST00000522796 EFSO43281 561 aa8.16□□□□□ -1.1
HMGB4-204ENST00000522796 PAGE1O75459 146 aa8.16□□□□□ -1.1
HMGB4-204ENST00000522796 RECQL4O94761 1208 aa8.16□□□□□ -1.1
HMGB4-204ENST00000522796 F9P00740 461 aa8.16□□□□□ -1.1
HMGB4-204ENST00000522796 CNPP09543 421 aaKnown RBP8.16□□□□□ -1.1
HMGB4-204ENST00000522796 TMEM253P0C7T8 217 aa8.16□□□□□ -1.1
HMGB4-204ENST00000522796 MAGP20916 626 aa8.16□□□□□ -1.1
HMGB4-204ENST00000522796 LAP3P28838 519 aa8.16□□□□□ -1.1
HMGB4-204ENST00000522796 ADSSP30520 456 aa8.16□□□□□ -1.1
HMGB4-204ENST00000522796 KCNJ1P48048 391 aa8.16□□□□□ -1.1
HMGB4-204ENST00000522796 SLC12A3P55017 1021 aa8.16□□□□□ -1.1
HMGB4-204ENST00000522796 PTPN12Q05209 780 aaKnown RBP8.16□□□□□ -1.1
HMGB4-204ENST00000522796 USP17L24Q0WX57 530 aa8.16□□□□□ -1.1
HMGB4-204ENST00000522796 BST1Q10588 318 aa8.16□□□□□ -1.1
HMGB4-204ENST00000522796 FAM182AQ5T1J6 154 aa8.16□□□□□ -1.1
HMGB4-204ENST00000522796 PDZK1Q5T2W1 519 aa8.16□□□□□ -1.1
HMGB4-204ENST00000522796 TMEM236Q5W0B7 351 aa8.16□□□□□ -1.1
HMGB4-204ENST00000522796 FAM122BQ7Z309 247 aa8.16□□□□□ -1.1
HMGB4-204ENST00000522796 LHFPL3Q86UP9 236 aa8.16□□□□□ -1.1
HMGB4-204ENST00000522796 SLC13A5Q86YT5 568 aaPredicted RBP8.16□□□□□ -1.1
HMGB4-204ENST00000522796 ZCCHC9Q8N567 271 aaKnown RBP8.16□□□□□ -1.1
HMGB4-204ENST00000522796 ZMIZ2Q8NF64 920 aa8.16□□□□□ -1.1
HMGB4-204ENST00000522796 RNASE11Q8TAA1 199 aaKnown RBP8.16□□□□□ -1.1
HMGB4-204ENST00000522796 NDNFQ8TB73 568 aa8.16□□□□□ -1.1
HMGB4-204ENST00000522796 SLC35G2Q8TBE7 412 aa8.16□□□□□ -1.1
HMGB4-204ENST00000522796 SLC22A17Q8WUG5 538 aa8.16□□□□□ -1.1
HMGB4-204ENST00000522796 TOP1MTQ969P6 601 aa8.16□□□□□ -1.1
HMGB4-204ENST00000522796 AP2M1Q96CW1 435 aa8.16□□□□□ -1.1
HMGB4-204ENST00000522796 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.16□□□□□ -1.1
HMGB4-204ENST00000522796 EBF4Q9BQW3 602 aa8.16□□□□□ -1.1
HMGB4-204ENST00000522796 TBCDQ9BTW9 1192 aa8.16□□□□□ -1.1
HMGB4-204ENST00000522796 NFKBIZQ9BYH8 718 aa8.16□□□□□ -1.1
HMGB4-204ENST00000522796 EXD2Q9NVH0 621 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms