RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 DLG1Q12959 904 aa23.6■■□□□ 1.37
PVT1-212ENST00000521951 RPE65Q16518 533 aa23.6■■□□□ 1.37
PVT1-212ENST00000521951 AASDHQ4L235 1098 aaPredicted RBP23.6■■□□□ 1.37
PVT1-212ENST00000521951 LRRC8EQ6NSJ5 796 aa23.6■■□□□ 1.37
PVT1-212ENST00000521951 OGFOD3Q6PK18 319 aa23.6■■□□□ 1.37
PVT1-212ENST00000521951 TRABD2AQ86V40 505 aa23.6■■□□□ 1.37
PVT1-212ENST00000521951 SPATA6LQ8N4H0 392 aa23.6■■□□□ 1.37
PVT1-212ENST00000521951 ACMSDQ8TDX5 336 aa23.6■■□□□ 1.37
PVT1-212ENST00000521951 SKA2Q8WVK7 121 aaPredicted RBP23.6■■□□□ 1.37
PVT1-212ENST00000521951 PATE1Q8WXA2 126 aa23.6■■□□□ 1.37
PVT1-212ENST00000521951 TMEM9BQ9NQ34 198 aa23.6■■□□□ 1.37
PVT1-212ENST00000521951 NLGN3Q9NZ94 848 aa23.6■■□□□ 1.37
PVT1-212ENST00000521951 RUVBL2Q9Y230 463 aaKnown RBP23.6■■□□□ 1.37
PVT1-212ENST00000521951 PCDHGB2Q9Y5G2 931 aa23.6■■□□□ 1.37
PVT1-212ENST00000521951 CFAP20Q9Y6A4 193 aaKnown RBP23.6■■□□□ 1.37
PVT1-212ENST00000521951 OR52A4PA6NMU1 304 aa23.59■■□□□ 1.37
PVT1-212ENST00000521951 GOLGA8RI6L899 631 aa23.59■■□□□ 1.37
PVT1-212ENST00000521951 IFRD1O00458 451 aaPredicted RBP23.59■■□□□ 1.37
PVT1-212ENST00000521951 FOXD2O60548 495 aaPredicted RBP23.59■■□□□ 1.37
PVT1-212ENST00000521951 MYZAPP0CAP1 466 aa23.59■■□□□ 1.37
PVT1-212ENST00000521951 PYGBP11216 843 aa23.59■■□□□ 1.37
PVT1-212ENST00000521951 SLC26A3P40879 764 aa23.59■■□□□ 1.37
PVT1-212ENST00000521951 CSHL1Q14406 222 aa23.59■■□□□ 1.37
PVT1-212ENST00000521951 SH2D5Q6ZV89 423 aa23.59■■□□□ 1.37
PVT1-212ENST00000521951 TBC1D1Q86TI0 1168 aaPredicted RBP23.59■■□□□ 1.37
PVT1-212ENST00000521951 MYO1HQ8N1T3 1032 aa23.59■■□□□ 1.37
PVT1-212ENST00000521951 CFAP61Q8NHU2 1237 aa23.59■■□□□ 1.37
PVT1-212ENST00000521951 TFGQ92734 400 aaPredicted RBP23.59■■□□□ 1.37
PVT1-212ENST00000521951 PGM2Q96G03 612 aa23.59■■□□□ 1.37
PVT1-212ENST00000521951 CABS1Q96KC9 395 aa23.59■■□□□ 1.37
PVT1-212ENST00000521951 C12orf66Q96MD2 445 aa23.59■■□□□ 1.37
PVT1-212ENST00000521951 TMBIM4Q9HC24 238 aa23.59■■□□□ 1.37
PVT1-212ENST00000521951 ZNF624Q9P2J8 865 aaPredicted RBP23.59■■□□□ 1.37
PVT1-212ENST00000521951 OR5K4A6NMS3 321 aa23.59■■□□□ 1.37
PVT1-212ENST00000521951 TRIM38O00635 465 aa23.59■■□□□ 1.37
PVT1-212ENST00000521951 NOBOXO60393 691 aa23.59■■□□□ 1.37
PVT1-212ENST00000521951 MATN4O95460 622 aa23.59■■□□□ 1.37
PVT1-212ENST00000521951 SLC2A4P14672 509 aa23.59■■□□□ 1.37
PVT1-212ENST00000521951 SUZ12Q15022 739 aaKnown RBP23.59■■□□□ 1.37
PVT1-212ENST00000521951 TNFAIP8L3Q5GJ75 292 aa23.59■■□□□ 1.37
PVT1-212ENST00000521951 C6orf132Q5T0Z8 1188 aa23.59■■□□□ 1.37
PVT1-212ENST00000521951 DBX2Q6ZNG2 339 aa23.59■■□□□ 1.37
PVT1-212ENST00000521951 CENPLQ8N0S6 344 aaPredicted RBP23.59■■□□□ 1.37
PVT1-212ENST00000521951 OR4C6Q8NH72 309 aa23.59■■□□□ 1.37
PVT1-212ENST00000521951 KCTD4Q8WVF5 259 aa23.59■■□□□ 1.37
PVT1-212ENST00000521951 NXNL1Q96CM4 212 aa23.59■■□□□ 1.37
PVT1-212ENST00000521951 UNKQ9C0B0 810 aaKnown RBP23.59■■□□□ 1.37
PVT1-212ENST00000521951 DERL2Q9GZP9 239 aa23.59■■□□□ 1.37
PVT1-212ENST00000521951 IGSF5Q9NSI5 407 aa23.59■■□□□ 1.37
PVT1-212ENST00000521951 PCMTD2Q9NV79 361 aa23.59■■□□□ 1.37
PVT1-212ENST00000521951 SIRPGQ9P1W8 387 aa23.59■■□□□ 1.37
PVT1-212ENST00000521951 GOLGA4Q13439 2230 aaKnown RBP23.58■■□□□ 1.37
PVT1-212ENST00000521951 ASCC3Q8N3C0 2202 aaKnown RBP23.58■■□□□ 1.37
PVT1-212ENST00000521951 RIF1Q5UIP0 2472 aaKnown RBP23.58■■□□□ 1.37
PVT1-212ENST00000521951 KIR2DS5A0A0G2JLQ3 304 aa23.58■■□□□ 1.36
PVT1-212ENST00000521951 A0A0G2JNG1 304 aa23.58■■□□□ 1.36
PVT1-212ENST00000521951 KIR2DS3K7RE56 304 aa23.58■■□□□ 1.36
PVT1-212ENST00000521951 LTA4HP09960 611 aaKnown RBP23.58■■□□□ 1.36
PVT1-212ENST00000521951 ALPPL2P10696 532 aa23.58■■□□□ 1.36
PVT1-212ENST00000521951 SLC19A1P41440 591 aa23.58■■□□□ 1.36
PVT1-212ENST00000521951 KIR2DS5Q14953 304 aa23.58■■□□□ 1.36
PVT1-212ENST00000521951 CLEC14AQ86T13 490 aa23.58■■□□□ 1.36
PVT1-212ENST00000521951 PLD6Q8N2A8 252 aaKnown RBP23.58■■□□□ 1.36
PVT1-212ENST00000521951 SFRP1Q8N474 314 aa23.58■■□□□ 1.36
PVT1-212ENST00000521951 EID2Q8N6I1 236 aa23.58■■□□□ 1.36
PVT1-212ENST00000521951 PHC3Q8NDX5 983 aa23.58■■□□□ 1.36
PVT1-212ENST00000521951 DUSP23Q9BVJ7 150 aa23.58■■□□□ 1.36
PVT1-212ENST00000521951 IMP3Q9NV31 184 aaKnown RBP23.58■■□□□ 1.36
PVT1-212ENST00000521951 IKZF3Q9UKT9 509 aa23.58■■□□□ 1.36
PVT1-212ENST00000521951 GOLGA6L10A6NI86 522 aa23.57■■□□□ 1.36
PVT1-212ENST00000521951 KLHL2O95198 593 aa23.57■■□□□ 1.36
PVT1-212ENST00000521951 MTHFD1P11586 935 aaKnown RBP23.57■■□□□ 1.36
PVT1-212ENST00000521951 COL6A2P12110 1019 aa23.57■■□□□ 1.36
PVT1-212ENST00000521951 CD1DP15813 335 aa23.57■■□□□ 1.36
PVT1-212ENST00000521951 XRCC1P18887 633 aaPredicted RBP23.57■■□□□ 1.36
PVT1-212ENST00000521951 DUS1LQ6P1R4 473 aaKnown RBP23.57■■□□□ 1.36
PVT1-212ENST00000521951 C17orf82Q86X59 251 aaPredicted RBP23.57■■□□□ 1.36
PVT1-212ENST00000521951 RASGRP3Q8IV61 690 aa23.57■■□□□ 1.36
PVT1-212ENST00000521951 SRRM1Q8IYB3 904 aaKnown RBP23.57■■□□□ 1.36
PVT1-212ENST00000521951 GPR156Q8NFN8 814 aa23.57■■□□□ 1.36
PVT1-212ENST00000521951 SLC37A2Q8TED4 501 aa23.57■■□□□ 1.36
PVT1-212ENST00000521951 ASB11Q8WXH4 323 aa23.57■■□□□ 1.36
PVT1-212ENST00000521951 FOPNLQ96NB1 174 aa23.57■■□□□ 1.36
PVT1-212ENST00000521951 ASF1AQ9Y294 204 aa23.57■■□□□ 1.36
PVT1-212ENST00000521951 ANKRD12Q6UB98 2062 aa23.56■■□□□ 1.36
PVT1-212ENST00000521951 C4orf47A7E2U8 309 aa23.56■■□□□ 1.36
PVT1-212ENST00000521951 GDF9O60383 454 aa23.56■■□□□ 1.36
PVT1-212ENST00000521951 TOP3BO95985 862 aaKnown RBP23.56■■□□□ 1.36
PVT1-212ENST00000521951 KRT4P19013 534 aa23.56■■□□□ 1.36
PVT1-212ENST00000521951 CCNFP41002 786 aa23.56■■□□□ 1.36
PVT1-212ENST00000521951 SLC14A1Q13336 389 aa23.56■■□□□ 1.36
PVT1-212ENST00000521951 UNC5DQ6UXZ4 953 aa23.56■■□□□ 1.36
PVT1-212ENST00000521951 C4orf33Q8N1A6 199 aa23.56■■□□□ 1.36
PVT1-212ENST00000521951 CXorf40BQ96DE9 158 aa23.56■■□□□ 1.36
PVT1-212ENST00000521951 FERD3LQ96RJ6 166 aa23.56■■□□□ 1.36
PVT1-212ENST00000521951 NMRAL1Q9HBL8 299 aa23.56■■□□□ 1.36
PVT1-212ENST00000521951 ZNF358Q9NW07 568 aa23.56■■□□□ 1.36
PVT1-212ENST00000521951 ADAMTS6Q9UKP5 1117 aa23.56■■□□□ 1.36
PVT1-212ENST00000521951 BTBD3Q9Y2F9 522 aa23.56■■□□□ 1.36
PVT1-212ENST00000521951 HEBP2Q9Y5Z4 205 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms